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PMC:7091888 / 5901-6821 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
220 185-186 Gene denotes S Gene:43740568
221 20-30 Species denotes SARS-CoV-2 Tax:2697049
222 77-87 Species denotes SARS-CoV-2 Tax:2697049
223 89-97 Species denotes SARS-CoV Tax:694009
224 103-111 Species denotes MERS-CoV Tax:1335626
225 174-184 Species denotes SARS-CoV-2 Tax:2697049
226 201-209 Species denotes SARS-CoV Tax:694009
227 230-238 Species denotes MERS-CoV Tax:1335626
228 280-290 Species denotes SARS-CoV-2 Tax:2697049
229 295-303 Species denotes SARS-CoV Tax:694009
230 358-368 Species denotes SARS-CoV-2 Tax:2697049
231 370-378 Species denotes SARS-CoV Tax:694009
232 384-392 Species denotes MERS-CoV Tax:1335626
233 656-666 Species denotes SARS-CoV-2 Tax:2697049
234 740-748 Species denotes SARS-CoV Tax:694009
235 753-761 Species denotes MERS-CoV Tax:1335626
236 827-831 Species denotes mice Tax:10090
237 847-855 Species denotes SARS-CoV Tax:694009
238 112-117 Gene denotes spike Gene:43740568
239 607-610 Chemical denotes SDS MESH:D012967

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T29 122-130 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T30 252-262 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T31 676-683 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T114 20-28 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T115 20-24 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T116 77-85 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T117 77-81 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T118 89-97 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T119 89-93 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T120 174-182 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T121 174-178 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T122 201-209 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T123 201-205 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T124 280-288 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T125 280-284 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T126 295-303 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T127 295-299 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T128 358-366 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T129 358-362 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T130 370-378 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T131 370-374 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T132 656-664 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T133 656-660 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T134 740-748 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T135 740-744 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T136 847-855 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T137 847-851 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T53 36-37 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T54 252-271 http://purl.obolibrary.org/obo/CHEBI_33708 denotes amino acid residues
T55 252-271 http://purl.obolibrary.org/obo/PR_000036907 denotes amino acid residues
T56 466-472 http://purl.obolibrary.org/obo/UBERON_0001155 denotes colons
T57 617-618 http://purl.obolibrary.org/obo/CLO_0001021 denotes b

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T34 122-130 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T35 252-262 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T36 252-257 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T37 258-262 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T38 607-610 Chemical denotes SDS http://purl.obolibrary.org/obo/CHEBI_8984
T39 676-683 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T23 132-242 Sentence denotes GenBank accession numbers are QHR63250.1 (SARS-CoV-2 S), AY278488.2 (SARS-CoV S), and AFS88936.1 (MERS-CoV S).
T24 243-419 Sentence denotes Variable amino acid residues between SARS-CoV-2 and SARS-CoV are highlighted in cyan, and conserved residues among SARS-CoV-2, SARS-CoV, and MERS-CoV are highlighted in yellow.
T25 420-557 Sentence denotes Asterisks represent fully conserved residues, colons represent highly conserved residues, and periods represent lowly conserved residues.
T26 558-606 Sentence denotes The alignment was performed using Clustal Omega.
T27 607-671 Sentence denotes SDS-PAGE (b) and Western blot (c, d) analysis of SARS-CoV-2 RBD.
T28 672-739 Sentence denotes The protein molecular weight marker (kDa) is indicated on the left.
T29 740-793 Sentence denotes SARS-CoV and MERS-CoV RBDs were included as controls.
T30 794-920 Sentence denotes Antisera (1:3,000 dilution) from mice immunized with SARS-CoV RBD (c) and MERS-CoV RBD (d) were used for Western blot analysis