PMC:7091888 / 17556-19816
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
695 | 225-230 | Gene | denotes | hACE2 | Gene:59272 |
696 | 282-287 | Gene | denotes | hDPP4 | Gene:1803 |
697 | 437-447 | Gene | denotes | hACE2/293T | Gene:59272 |
698 | 519-529 | Gene | denotes | hDPP4/293T | Gene:1803 |
699 | 2093-2098 | Gene | denotes | hACE2 | Gene:59272 |
700 | 2183-2193 | Gene | denotes | hDPP4/293T | Gene:1803 |
701 | 11-21 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
702 | 119-127 | Species | denotes | SARS-CoV | Tax:694009 |
703 | 160-170 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
704 | 203-213 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
705 | 243-251 | Species | denotes | SARS-CoV | Tax:694009 |
706 | 256-264 | Species | denotes | MERS-CoV | Tax:1335626 |
707 | 327-337 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
708 | 369-379 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
709 | 384-392 | Species | denotes | SARS-CoV | Tax:694009 |
710 | 481-489 | Species | denotes | MERS-CoV | Tax:1335626 |
711 | 542-550 | Species | denotes | SARS-CoV | Tax:694009 |
712 | 578-588 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
713 | 593-601 | Species | denotes | SARS-CoV | Tax:694009 |
714 | 629-637 | Species | denotes | MERS-CoV | Tax:1335626 |
715 | 692-702 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
716 | 707-715 | Species | denotes | SARS-CoV | Tax:694009 |
717 | 754-762 | Species | denotes | MERS-CoV | Tax:1335626 |
718 | 909-919 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
719 | 942-950 | Species | denotes | SARS-CoV | Tax:694009 |
720 | 984-994 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
721 | 1011-1019 | Species | denotes | SARS-CoV | Tax:694009 |
722 | 1077-1085 | Species | denotes | MERS-CoV | Tax:1335626 |
723 | 1125-1135 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
724 | 1153-1161 | Species | denotes | SARS-CoV | Tax:694009 |
725 | 1175-1180 | Species | denotes | mouse | Tax:10090 |
726 | 1204-1208 | Species | denotes | mice | Tax:10090 |
727 | 1224-1233 | Species | denotes | mammalian | Tax:9606 |
728 | 1249-1257 | Species | denotes | SARS-CoV | Tax:694009 |
729 | 1293-1297 | Species | denotes | mice | Tax:10090 |
730 | 1313-1322 | Species | denotes | mammalian | Tax:9606 |
731 | 1546-1556 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
732 | 1573-1581 | Species | denotes | SARS-CoV | Tax:694009 |
733 | 1725-1733 | Species | denotes | SARS-CoV | Tax:694009 |
734 | 1748-1753 | Species | denotes | mouse | Tax:10090 |
735 | 1848-1853 | Species | denotes | mouse | Tax:10090 |
736 | 2013-2023 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
737 | 2048-2056 | Species | denotes | SARS-CoV | Tax:694009 |
738 | 2137-2145 | Species | denotes | MERS-CoV | Tax:1335626 |
739 | 1609-1617 | Species | denotes | SARS-CoV | Tax:694009 |
740 | 1767-1787 | Disease | denotes | SARS-CoV-2 infection | MESH:C000657245 |
741 | 2080-2089 | Disease | denotes | infection | MESH:D007239 |
742 | 2170-2179 | Disease | denotes | infection | MESH:D007239 |
743 | 231-235 | CellLine | denotes | 293T | CVCL:0063 |
744 | 288-292 | CellLine | denotes | 293T | CVCL:0063 |
745 | 2099-2103 | CellLine | denotes | 293T | CVCL:0063 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T136 | 175-182 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T137 | 236-241 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T138 | 293-298 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T139 | 342-349 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T140 | 449-454 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T141 | 531-536 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T142 | 555-562 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T143 | 968-975 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T144 | 1053-1060 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T145 | 1140-1147 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T146 | 1234-1238 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T147 | 1323-1327 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T148 | 1441-1444 | Body_part | denotes | IgG | http://purl.org/sig/ont/fma/fma62872 |
T149 | 1445-1453 | Body_part | denotes | antibody | http://purl.org/sig/ont/fma/fma62871 |
T150 | 1455-1457 | Body_part | denotes | Ab | http://purl.org/sig/ont/fma/fma62871 |
T151 | 1966-1974 | Body_part | denotes | antibody | http://purl.org/sig/ont/fma/fma62871 |
T152 | 2111-2116 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T153 | 2194-2199 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T286 | 11-19 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T287 | 11-15 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T288 | 119-127 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T289 | 119-123 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T290 | 160-168 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T291 | 160-164 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T292 | 203-211 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T293 | 203-207 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T294 | 243-251 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T295 | 243-247 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T296 | 327-335 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T297 | 327-331 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T298 | 369-377 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T299 | 369-373 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T300 | 384-392 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T301 | 384-388 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T302 | 542-550 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T303 | 542-546 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T304 | 578-586 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T305 | 578-582 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T306 | 593-601 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T307 | 593-597 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T308 | 692-700 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T309 | 692-696 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T310 | 707-715 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T311 | 707-711 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T312 | 909-917 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T313 | 909-913 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T314 | 942-950 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T315 | 942-946 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T316 | 984-992 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T317 | 984-988 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T318 | 1011-1019 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T319 | 1011-1015 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T320 | 1125-1133 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T321 | 1125-1129 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T322 | 1153-1161 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T323 | 1153-1157 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T324 | 1249-1257 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T325 | 1249-1253 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T326 | 1546-1554 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T327 | 1546-1550 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T328 | 1573-1581 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T329 | 1573-1577 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T330 | 1609-1617 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T331 | 1609-1613 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T332 | 1725-1733 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T333 | 1725-1729 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T334 | 1767-1775 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T335 | 1767-1771 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T336 | 1778-1787 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T337 | 2013-2021 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T338 | 2013-2017 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T339 | 2048-2056 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T340 | 2048-2052 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T341 | 2080-2089 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T342 | 2170-2179 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T340 | 105-113 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activity |
T341 | 129-130 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T342 | 231-235 | http://purl.obolibrary.org/obo/CLO_0050894 | denotes | 293T |
T343 | 231-235 | http://purl.obolibrary.org/obo/CLO_0051650 | denotes | 293T |
T344 | 231-235 | http://purl.obolibrary.org/obo/CLO_0052052 | denotes | 293T |
T345 | 236-241 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T346 | 288-292 | http://purl.obolibrary.org/obo/CLO_0050894 | denotes | 293T |
T347 | 288-292 | http://purl.obolibrary.org/obo/CLO_0051650 | denotes | 293T |
T348 | 288-292 | http://purl.obolibrary.org/obo/CLO_0052052 | denotes | 293T |
T349 | 293-298 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T350 | 443-447 | http://purl.obolibrary.org/obo/CLO_0050894 | denotes | 293T |
T351 | 443-447 | http://purl.obolibrary.org/obo/CLO_0051650 | denotes | 293T |
T352 | 443-447 | http://purl.obolibrary.org/obo/CLO_0052052 | denotes | 293T |
T353 | 449-454 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T354 | 456-457 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T355 | 525-529 | http://purl.obolibrary.org/obo/CLO_0050894 | denotes | 293T |
T356 | 525-529 | http://purl.obolibrary.org/obo/CLO_0051650 | denotes | 293T |
T357 | 525-529 | http://purl.obolibrary.org/obo/CLO_0052052 | denotes | 293T |
T358 | 531-536 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T359 | 538-539 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T360 | 657-658 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
T361 | 925-926 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T362 | 928-929 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
T363 | 956-957 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T364 | 959-960 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
T365 | 1175-1180 | http://purl.obolibrary.org/obo/CLO_0007836 | denotes | mouse |
T366 | 1234-1238 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T367 | 1277-1283 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
T368 | 1323-1327 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T369 | 1748-1753 | http://purl.obolibrary.org/obo/CLO_0007836 | denotes | mouse |
T370 | 1848-1853 | http://purl.obolibrary.org/obo/CLO_0007836 | denotes | mouse |
T371 | 2099-2103 | http://purl.obolibrary.org/obo/CLO_0050894 | denotes | 293T |
T372 | 2099-2103 | http://purl.obolibrary.org/obo/CLO_0051650 | denotes | 293T |
T373 | 2099-2103 | http://purl.obolibrary.org/obo/CLO_0052052 | denotes | 293T |
T374 | 2111-2116 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T375 | 2189-2193 | http://purl.obolibrary.org/obo/CLO_0050894 | denotes | 293T |
T376 | 2189-2193 | http://purl.obolibrary.org/obo/CLO_0051650 | denotes | 293T |
T377 | 2189-2193 | http://purl.obolibrary.org/obo/CLO_0052052 | denotes | 293T |
T378 | 2194-2199 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T81 | 175-182 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T82 | 342-349 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T83 | 555-562 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T84 | 968-975 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T85 | 1053-1060 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T86 | 1140-1147 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T106 | 243-326 | Sentence | denotes | SARS-CoV and MERS-CoV RBDs, as well as hDPP4/293T cells, were included as controls. |
T107 | 327-541 | Sentence | denotes | SARS-CoV-2 RBD protein inhibited entry of SARS-CoV-2 and SARS-CoV pseudoviruses into their respective target (hACE2/293T) cells (a), but not the entry of MERS-CoV pseudovirus into its target (hDPP4/293T) cells (a). |
T108 | 542-660 | Sentence | denotes | SARS-CoV RBD protein inhibited both SARS-CoV-2 and SARS-CoV pseudovirus entry, but not MERS-CoV pseudovirus entry (b). |
T109 | 661-785 | Sentence | denotes | MERS-CoV RBD inhibited neither SARS-CoV-2 nor SARS-CoV pseudovirus entry, but it did inhibit MERS-CoV pseudovirus entry (c). |
T110 | 786-1195 | Sentence | denotes | The data are presented as mean inhibition (%) ± s.e.m. (n = 4), and 50% inhibition concentration (IC50) was calculated for SARS-CoV-2 RBD (a, b, black), or SARS-CoV RBD (a, b, red), protein against SARS-CoV-2 pseudovirus and SARS-CoV pseudovirus and for MERS-CoV RBD protein (green) against MERS-CoV pseudovirus (c). d Cross-reactivity of SARS-CoV-2 RBD protein with SARS-CoV RBD-specific mouse sera by ELISA. |
T111 | 1196-1284 | Sentence | denotes | Sera of mice immunized with mammalian cell-expressed SARS-CoV RBD protein30 were tested. |
T112 | 1285-1382 | Sentence | denotes | Sera of mice immunized with mammalian cell-expressed MERS-CoV RBD protein31 were used as control. |
T113 | 1383-1436 | Sentence | denotes | The data are presented as mean A450 ± s.e.m. (n = 4). |
T114 | 1437-1824 | Sentence | denotes | The IgG antibody (Ab) titers were calculated as the endpoint dilution that remains positively detectable for SARS-CoV-2 RBD (black), or SARS-CoV RBD (red), binding to anti-SARS-CoV RBD sera (d) and for MERS-CoV RBD (green) binding to anti-MERS-CoV RBD sera (e). f Cross-neutralization of SARS-CoV RBD-immunized mouse sera against SARS-CoV-2 infection by pseudovirus neutralization assay. |
T115 | 1825-1880 | Sentence | denotes | MERS-CoV RBD-immunized mouse sera were used as control. |
T116 | 1881-1948 | Sentence | denotes | The data are presented as mean neutralization (%) ± s.e.m. (n = 4). |
T117 | 1949-2200 | Sentence | denotes | 50% neutralizing antibody titers (NT50) were calculated against SARS-CoV-2 pseudovirus (black), or SARS-CoV pseudovirus (red), (f) infection in hACE2/293T target cells, as well as against MERS-CoV pseudovirus (green) (g) infection in hDPP4/293T cells. |
T118 | 2201-2260 | Sentence | denotes | Experiments were repeated twice and yielded similar results |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32203189-20374001-19774536 | 1269-1271 | 20374001 | denotes | 30 |
32203189-27750111-19774537 | 1358-1360 | 27750111 | denotes | 31 |