PMC:7080117 / 1223-2066 JSONTXT

{"target":"http://pubannotation.org/docs/sourcedb/PMC/sourceid/7080117","sourcedb":"PMC","sourceid":"7080117","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7080117","text":"Findings\nThe majority of infected patients had a history of exposure in Wuhan or to infected patients and mostly presented with fever and cough. More than half of the patients presented bilateral, multifocal lung lesions, with peripheral distribution, and 53 (59%) patients had more than two lobes involved. Of all included patients, COVID-19 pneumonia presented with ground glass opacities in 65 (72%), consolidation in 12 (13%), crazy paving pattern in 11 (12%), interlobular thickening in 33 (37%), adjacent pleura thickening in 50 (56%), and linear opacities combined in 55 (61%). Pleural effusion, pericardial effusion, and lymphadenopathy were uncommon findings. In addition, baseline chest CT did not show any abnormalities in 21 patients (23%), but 3 patients presented bilateral ground glass opacities on the second CT after 3–4 days.","divisions":[{"label":"title","span":{"begin":0,"end":8}}],"tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"53","span":{"begin":34,"end":42},"obj":"Species"},{"id":"54","span":{"begin":93,"end":101},"obj":"Species"},{"id":"55","span":{"begin":167,"end":175},"obj":"Species"},{"id":"56","span":{"begin":265,"end":273},"obj":"Species"},{"id":"57","span":{"begin":324,"end":332},"obj":"Species"},{"id":"58","span":{"begin":737,"end":745},"obj":"Species"},{"id":"59","span":{"begin":759,"end":767},"obj":"Species"},{"id":"60","span":{"begin":25,"end":33},"obj":"Disease"},{"id":"61","span":{"begin":84,"end":92},"obj":"Disease"},{"id":"62","span":{"begin":128,"end":133},"obj":"Disease"},{"id":"63","span":{"begin":138,"end":143},"obj":"Disease"},{"id":"64","span":{"begin":334,"end":352},"obj":"Disease"},{"id":"65","span":{"begin":585,"end":601},"obj":"Disease"},{"id":"66","span":{"begin":603,"end":623},"obj":"Disease"},{"id":"67","span":{"begin":629,"end":644},"obj":"Disease"}],"attributes":[{"id":"A53","pred":"tao:has_database_id","subj":"53","obj":"Tax:9606"},{"id":"A54","pred":"tao:has_database_id","subj":"54","obj":"Tax:9606"},{"id":"A55","pred":"tao:has_database_id","subj":"55","obj":"Tax:9606"},{"id":"A56","pred":"tao:has_database_id","subj":"56","obj":"Tax:9606"},{"id":"A57","pred":"tao:has_database_id","subj":"57","obj":"Tax:9606"},{"id":"A58","pred":"tao:has_database_id","subj":"58","obj":"Tax:9606"},{"id":"A59","pred":"tao:has_database_id","subj":"59","obj":"Tax:9606"},{"id":"A60","pred":"tao:has_database_id","subj":"60","obj":"MESH:D007239"},{"id":"A61","pred":"tao:has_database_id","subj":"61","obj":"MESH:D007239"},{"id":"A62","pred":"tao:has_database_id","subj":"62","obj":"MESH:D005334"},{"id":"A63","pred":"tao:has_database_id","subj":"63","obj":"MESH:D003371"},{"id":"A64","pred":"tao:has_database_id","subj":"64","obj":"MESH:C000657245"},{"id":"A65","pred":"tao:has_database_id","subj":"65","obj":"MESH:D010996"},{"id":"A66","pred":"tao:has_database_id","subj":"66","obj":"MESH:D010490"},{"id":"A67","pred":"tao:has_database_id","subj":"67","obj":"MESH:D008206"},{"subj":"53","pred":"source","obj":"LitCovid-PubTator"},{"subj":"54","pred":"source","obj":"LitCovid-PubTator"},{"subj":"55","pred":"source","obj":"LitCovid-PubTator"},{"subj":"56","pred":"source","obj":"LitCovid-PubTator"},{"subj":"57","pred":"source","obj":"LitCovid-PubTator"},{"subj":"58","pred":"source","obj":"LitCovid-PubTator"},{"subj":"59","pred":"source","obj":"LitCovid-PubTator"},{"subj":"60","pred":"source","obj":"LitCovid-PubTator"},{"subj":"61","pred":"source","obj":"LitCovid-PubTator"},{"subj":"62","pred":"source","obj":"LitCovid-PubTator"},{"subj":"63","pred":"source","obj":"LitCovid-PubTator"},{"subj":"64","pred":"source","obj":"LitCovid-PubTator"},{"subj":"65","pred":"source","obj":"LitCovid-PubTator"},{"subj":"66","pred":"source","obj":"LitCovid-PubTator"},{"subj":"67","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T4","span":{"begin":208,"end":212},"obj":"Body_part"},{"id":"T5","span":{"begin":511,"end":517},"obj":"Body_part"},{"id":"T6","span":{"begin":691,"end":696},"obj":"Body_part"}],"attributes":[{"id":"A4","pred":"fma_id","subj":"T4","obj":"http://purl.org/sig/ont/fma/fma7195"},{"id":"A5","pred":"fma_id","subj":"T5","obj":"http://purl.org/sig/ont/fma/fma9583"},{"id":"A6","pred":"fma_id","subj":"T6","obj":"http://purl.org/sig/ont/fma/fma9576"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T4","span":{"begin":208,"end":212},"obj":"Body_part"},{"id":"T5","span":{"begin":511,"end":517},"obj":"Body_part"},{"id":"T6","span":{"begin":585,"end":601},"obj":"Body_part"},{"id":"T7","span":{"begin":691,"end":696},"obj":"Body_part"}],"attributes":[{"id":"A4","pred":"uberon_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A5","pred":"uberon_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/UBERON_0000977"},{"id":"A6","pred":"uberon_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/UBERON_0000175"},{"id":"A7","pred":"uberon_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T9","span":{"begin":334,"end":342},"obj":"Disease"},{"id":"T10","span":{"begin":343,"end":352},"obj":"Disease"},{"id":"T11","span":{"begin":603,"end":623},"obj":"Disease"},{"id":"T12","span":{"begin":629,"end":644},"obj":"Disease"}],"attributes":[{"id":"A9","pred":"mondo_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A10","pred":"mondo_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A11","pred":"mondo_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/MONDO_0001370"},{"id":"A12","pred":"mondo_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/MONDO_0005833"},{"subj":"T9","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T7","span":{"begin":47,"end":48},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T8","span":{"begin":208,"end":212},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"T9","span":{"begin":208,"end":212},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"},{"id":"T10","span":{"begin":455,"end":457},"obj":"http://purl.obolibrary.org/obo/CLO_0053733"},{"id":"T11","span":{"begin":511,"end":517},"obj":"http://purl.obolibrary.org/obo/UBERON_0000977"},{"id":"T12","span":{"begin":585,"end":601},"obj":"http://purl.obolibrary.org/obo/UBERON_0000175"},{"id":"T13","span":{"begin":691,"end":696},"obj":"http://www.ebi.ac.uk/efo/EFO_0000965"},{"id":"T14","span":{"begin":834,"end":837},"obj":"http://purl.obolibrary.org/obo/CLO_0001302"}],"attributes":[{"subj":"T7","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T8","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T9","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T13","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T13","span":{"begin":0,"end":8},"obj":"Sentence"},{"id":"T14","span":{"begin":9,"end":144},"obj":"Sentence"},{"id":"T15","span":{"begin":145,"end":307},"obj":"Sentence"},{"id":"T16","span":{"begin":308,"end":584},"obj":"Sentence"},{"id":"T17","span":{"begin":585,"end":668},"obj":"Sentence"},{"id":"T18","span":{"begin":669,"end":843},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T13","pred":"source","obj":"LitCovid-sentences"},{"subj":"T14","pred":"source","obj":"LitCovid-sentences"},{"subj":"T15","pred":"source","obj":"LitCovid-sentences"},{"subj":"T16","pred":"source","obj":"LitCovid-sentences"},{"subj":"T17","pred":"source","obj":"LitCovid-sentences"},{"subj":"T18","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T2","span":{"begin":128,"end":133},"obj":"Phenotype"},{"id":"T3","span":{"begin":138,"end":143},"obj":"Phenotype"},{"id":"T4","span":{"begin":343,"end":352},"obj":"Phenotype"},{"id":"T5","span":{"begin":585,"end":601},"obj":"Phenotype"},{"id":"T6","span":{"begin":603,"end":623},"obj":"Phenotype"},{"id":"T7","span":{"begin":629,"end":644},"obj":"Phenotype"}],"attributes":[{"id":"A2","pred":"hp_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/HP_0001945"},{"id":"A3","pred":"hp_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/HP_0012735"},{"id":"A4","pred":"hp_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A5","pred":"hp_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/HP_0002202"},{"id":"A6","pred":"hp_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/HP_0001698"},{"id":"A7","pred":"hp_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/HP_0002716"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-HP"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PubTator","color":"#ec93bb","default":true},{"id":"LitCovid-PD-FMA-UBERON","color":"#93d5ec"},{"id":"LitCovid-PD-UBERON","color":"#ece993"},{"id":"LitCovid-PD-MONDO","color":"#cf93ec"},{"id":"LitCovid-PD-CLO","color":"#93ecb5"},{"id":"LitCovid-sentences","color":"#ec9b93"},{"id":"LitCovid-PD-HP","color":"#93a4ec"}]}]}}