> top > docs > PMC:7080117 > spans > 1223-2066 > annotations

PMC:7080117 / 1223-2066 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
53 34-42 Species denotes patients Tax:9606
54 93-101 Species denotes patients Tax:9606
55 167-175 Species denotes patients Tax:9606
56 265-273 Species denotes patients Tax:9606
57 324-332 Species denotes patients Tax:9606
58 737-745 Species denotes patients Tax:9606
59 759-767 Species denotes patients Tax:9606
60 25-33 Disease denotes infected MESH:D007239
61 84-92 Disease denotes infected MESH:D007239
62 128-133 Disease denotes fever MESH:D005334
63 138-143 Disease denotes cough MESH:D003371
64 334-352 Disease denotes COVID-19 pneumonia MESH:C000657245
65 585-601 Disease denotes Pleural effusion MESH:D010996
66 603-623 Disease denotes pericardial effusion MESH:D010490
67 629-644 Disease denotes lymphadenopathy MESH:D008206

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T4 208-212 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T5 511-517 Body_part denotes pleura http://purl.org/sig/ont/fma/fma9583
T6 691-696 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T4 208-212 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T5 511-517 Body_part denotes pleura http://purl.obolibrary.org/obo/UBERON_0000977
T6 585-601 Body_part denotes Pleural effusion http://purl.obolibrary.org/obo/UBERON_0000175
T7 691-696 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T9 334-342 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T10 343-352 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T11 603-623 Disease denotes pericardial effusion http://purl.obolibrary.org/obo/MONDO_0001370
T12 629-644 Disease denotes lymphadenopathy http://purl.obolibrary.org/obo/MONDO_0005833

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T7 47-48 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T8 208-212 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T9 208-212 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T10 455-457 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T11 511-517 http://purl.obolibrary.org/obo/UBERON_0000977 denotes pleura
T12 585-601 http://purl.obolibrary.org/obo/UBERON_0000175 denotes Pleural effusion
T13 691-696 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T14 834-837 http://purl.obolibrary.org/obo/CLO_0001302 denotes 3–4

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T13 0-8 Sentence denotes Findings
T14 9-144 Sentence denotes The majority of infected patients had a history of exposure in Wuhan or to infected patients and mostly presented with fever and cough.
T15 145-307 Sentence denotes More than half of the patients presented bilateral, multifocal lung lesions, with peripheral distribution, and 53 (59%) patients had more than two lobes involved.
T16 308-584 Sentence denotes Of all included patients, COVID-19 pneumonia presented with ground glass opacities in 65 (72%), consolidation in 12 (13%), crazy paving pattern in 11 (12%), interlobular thickening in 33 (37%), adjacent pleura thickening in 50 (56%), and linear opacities combined in 55 (61%).
T17 585-668 Sentence denotes Pleural effusion, pericardial effusion, and lymphadenopathy were uncommon findings.
T18 669-843 Sentence denotes In addition, baseline chest CT did not show any abnormalities in 21 patients (23%), but 3 patients presented bilateral ground glass opacities on the second CT after 3–4 days.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T2 128-133 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T3 138-143 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T4 343-352 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T5 585-601 Phenotype denotes Pleural effusion http://purl.obolibrary.org/obo/HP_0002202
T6 603-623 Phenotype denotes pericardial effusion http://purl.obolibrary.org/obo/HP_0001698
T7 629-644 Phenotype denotes lymphadenopathy http://purl.obolibrary.org/obo/HP_0002716