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PMC:7080035 / 3136-4108 JSONTXT

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LitCovid_Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 742-744 https://glytoucan.org/Structures/Glycans/G04616ST denotes LN
T2 900-902 https://glytoucan.org/Structures/Glycans/G04616ST denotes LN

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T9 100-106 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738
T10 133-137 Body_part denotes Back http://purl.org/sig/ont/fma/fma25056
T11 316-327 Body_part denotes Lymphocytes http://purl.org/sig/ont/fma/fma62863
T12 621-625 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T13 789-800 Body_part denotes mediastinum http://purl.org/sig/ont/fma/fma9826
T14 831-842 Body_part denotes mediastinum http://purl.org/sig/ont/fma/fma9826
T15 868-879 Body_part denotes mediastinum http://purl.org/sig/ont/fma/fma9826

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T8 100-106 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341
T9 621-625 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T10 789-800 Body_part denotes mediastinum http://purl.obolibrary.org/obo/UBERON_0003728
T11 831-842 Body_part denotes mediastinum http://purl.obolibrary.org/obo/UBERON_0003728
T12 868-879 Body_part denotes mediastinum http://purl.obolibrary.org/obo/UBERON_0003728

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T15 95-106 Disease denotes sore throat http://purl.obolibrary.org/obo/MONDO_0002258
T16 742-744 Disease denotes LN http://purl.obolibrary.org/obo/MONDO_0002486
T17 900-902 Disease denotes LN http://purl.obolibrary.org/obo/MONDO_0002486

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T28 19-22 http://purl.obolibrary.org/obo/CLO_0001302 denotes 3 4
T29 67-69 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T30 621-625 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T31 621-625 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T10 27-30 Chemical denotes Man http://purl.obolibrary.org/obo/CHEBI_37684
T11 31-34 Chemical denotes Man http://purl.obolibrary.org/obo/CHEBI_37684
T12 517-520 Chemical denotes PET http://purl.obolibrary.org/obo/CHEBI_131701
T13 566-569 Chemical denotes LLL http://purl.obolibrary.org/obo/CHEBI_74541
T14 598-601 Chemical denotes LLL http://purl.obolibrary.org/obo/CHEBI_74541
T15 616-619 Chemical denotes LLL http://purl.obolibrary.org/obo/CHEBI_74541
T16 742-744 Chemical denotes LN http://purl.obolibrary.org/obo/CHEBI_17571|http://purl.obolibrary.org/obo/CHEBI_73529
T18 900-902 Chemical denotes LN http://purl.obolibrary.org/obo/CHEBI_17571|http://purl.obolibrary.org/obo/CHEBI_73529

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T9 88-93 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T10 95-106 Phenotype denotes sore throat http://purl.obolibrary.org/obo/HP_0033050
T11 107-112 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T12 114-121 Phenotype denotes fatigue http://purl.obolibrary.org/obo/HP_0012378
T13 123-132 Phenotype denotes dizziness http://purl.obolibrary.org/obo/HP_0002321
T14 133-142 Phenotype denotes Back pain http://purl.obolibrary.org/obo/HP_0003418
T15 144-153 Phenotype denotes dry cough http://purl.obolibrary.org/obo/HP_0031246
T16 154-159 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T17 168-177 Phenotype denotes dry cough http://purl.obolibrary.org/obo/HP_0031246
T18 179-186 Phenotype denotes myalgia http://purl.obolibrary.org/obo/HP_0003326
T19 192-199 Phenotype denotes fatigue http://purl.obolibrary.org/obo/HP_0012378

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T25 0-22 Sentence denotes Patient number 1 2 3 4
T26 23-46 Sentence denotes Sex Man Man Woman Woman
T27 47-69 Sentence denotes Age, years 57 56 61 48
T28 70-199 Sentence denotes Clinical symptoms Fever, sore throat Fever, fatigue, dizziness Back pain, dry cough Fever, chill, dry cough, myalgia, and fatigue
T29 200-243 Sentence denotes History of staying in Wuhan Yes Yes Yes Yes
T30 244-315 Sentence denotes WBC (× 109/L) (reference range 3.5–9.5 × 109/L) Normal 3.33 3.47 Normal
T31 316-383 Sentence denotes Lymphocytes (%) (reference range 20–40%) Normal 17.5% Normal Normal
T32 384-452 Sentence denotes HsCRP (mg/L) (reference range 0–5 mg/L) 6.65 23.6 Not available 12.2
T33 453-516 Sentence denotes Respiratory pathogens* Negative Negative Not available Negative
T34 517-620 Sentence denotes PET/CT findings Number of affected lobes 2 (RUL, LLL) 5 (all lobes) 3 (RUL, RLL, LLL) 3 (RML, RLL, LLL)
T35 621-717 Sentence denotes Lung CT features GGO GGO and consolidative opacities GGO GGO with interlobular septal thickening
T36 718-741 Sentence denotes SUVmax 4.6 7.9 12.2 9.3
T37 742-899 Sentence denotes LN involvement Absent Right subclavian region, mediastinum Right supraclavicular region, mediastinum Right subclavian region, mediastinum, right hilar region
T38 900-921 Sentence denotes LN SUVmax – 7 5.4 5.5
T39 922-972 Sentence denotes Concomitant diseases** Absent Absent Absent Absent

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
73 561-604 Gene denotes RUL, LLL) 5 (all lobes) 3 (RUL, RLL, LLL) 3
74 0-7 Species denotes Patient Tax:9606
75 35-40 Species denotes Woman Tax:9606
76 41-46 Species denotes Woman Tax:9606
77 453-464 Species denotes Respiratory Tax:12814
78 88-93 Disease denotes Fever MESH:D005334
79 95-112 Disease denotes sore throat Fever MESH:D010608
80 114-121 Disease denotes fatigue MESH:D005221
81 123-142 Disease denotes dizziness Back pain MESH:D004244
82 144-159 Disease denotes dry cough Fever MESH:D003371
83 168-177 Disease denotes dry cough MESH:D003371
84 179-186 Disease denotes myalgia MESH:D063806
85 192-199 Disease denotes fatigue MESH:D005221