PMC:7080035 / 3136-4108
Annnotations
LitCovid_Glycan-Motif-Structure
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 742-744 | https://glytoucan.org/Structures/Glycans/G04616ST | denotes | LN |
T2 | 900-902 | https://glytoucan.org/Structures/Glycans/G04616ST | denotes | LN |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T9 | 100-106 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
T10 | 133-137 | Body_part | denotes | Back | http://purl.org/sig/ont/fma/fma25056 |
T11 | 316-327 | Body_part | denotes | Lymphocytes | http://purl.org/sig/ont/fma/fma62863 |
T12 | 621-625 | Body_part | denotes | Lung | http://purl.org/sig/ont/fma/fma7195 |
T13 | 789-800 | Body_part | denotes | mediastinum | http://purl.org/sig/ont/fma/fma9826 |
T14 | 831-842 | Body_part | denotes | mediastinum | http://purl.org/sig/ont/fma/fma9826 |
T15 | 868-879 | Body_part | denotes | mediastinum | http://purl.org/sig/ont/fma/fma9826 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T8 | 100-106 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
T9 | 621-625 | Body_part | denotes | Lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T10 | 789-800 | Body_part | denotes | mediastinum | http://purl.obolibrary.org/obo/UBERON_0003728 |
T11 | 831-842 | Body_part | denotes | mediastinum | http://purl.obolibrary.org/obo/UBERON_0003728 |
T12 | 868-879 | Body_part | denotes | mediastinum | http://purl.obolibrary.org/obo/UBERON_0003728 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T15 | 95-106 | Disease | denotes | sore throat | http://purl.obolibrary.org/obo/MONDO_0002258 |
T16 | 742-744 | Disease | denotes | LN | http://purl.obolibrary.org/obo/MONDO_0002486 |
T17 | 900-902 | Disease | denotes | LN | http://purl.obolibrary.org/obo/MONDO_0002486 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T28 | 19-22 | http://purl.obolibrary.org/obo/CLO_0001302 | denotes | 3 4 |
T29 | 67-69 | http://purl.obolibrary.org/obo/CLO_0001382 | denotes | 48 |
T30 | 621-625 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | Lung |
T31 | 621-625 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | Lung |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T10 | 27-30 | Chemical | denotes | Man | http://purl.obolibrary.org/obo/CHEBI_37684 |
T11 | 31-34 | Chemical | denotes | Man | http://purl.obolibrary.org/obo/CHEBI_37684 |
T12 | 517-520 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
T13 | 566-569 | Chemical | denotes | LLL | http://purl.obolibrary.org/obo/CHEBI_74541 |
T14 | 598-601 | Chemical | denotes | LLL | http://purl.obolibrary.org/obo/CHEBI_74541 |
T15 | 616-619 | Chemical | denotes | LLL | http://purl.obolibrary.org/obo/CHEBI_74541 |
T16 | 742-744 | Chemical | denotes | LN | http://purl.obolibrary.org/obo/CHEBI_17571|http://purl.obolibrary.org/obo/CHEBI_73529 |
T18 | 900-902 | Chemical | denotes | LN | http://purl.obolibrary.org/obo/CHEBI_17571|http://purl.obolibrary.org/obo/CHEBI_73529 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T9 | 88-93 | Phenotype | denotes | Fever | http://purl.obolibrary.org/obo/HP_0001945 |
T10 | 95-106 | Phenotype | denotes | sore throat | http://purl.obolibrary.org/obo/HP_0033050 |
T11 | 107-112 | Phenotype | denotes | Fever | http://purl.obolibrary.org/obo/HP_0001945 |
T12 | 114-121 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
T13 | 123-132 | Phenotype | denotes | dizziness | http://purl.obolibrary.org/obo/HP_0002321 |
T14 | 133-142 | Phenotype | denotes | Back pain | http://purl.obolibrary.org/obo/HP_0003418 |
T15 | 144-153 | Phenotype | denotes | dry cough | http://purl.obolibrary.org/obo/HP_0031246 |
T16 | 154-159 | Phenotype | denotes | Fever | http://purl.obolibrary.org/obo/HP_0001945 |
T17 | 168-177 | Phenotype | denotes | dry cough | http://purl.obolibrary.org/obo/HP_0031246 |
T18 | 179-186 | Phenotype | denotes | myalgia | http://purl.obolibrary.org/obo/HP_0003326 |
T19 | 192-199 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25 | 0-22 | Sentence | denotes | Patient number 1 2 3 4 |
T26 | 23-46 | Sentence | denotes | Sex Man Man Woman Woman |
T27 | 47-69 | Sentence | denotes | Age, years 57 56 61 48 |
T28 | 70-199 | Sentence | denotes | Clinical symptoms Fever, sore throat Fever, fatigue, dizziness Back pain, dry cough Fever, chill, dry cough, myalgia, and fatigue |
T29 | 200-243 | Sentence | denotes | History of staying in Wuhan Yes Yes Yes Yes |
T30 | 244-315 | Sentence | denotes | WBC (× 109/L) (reference range 3.5–9.5 × 109/L) Normal 3.33 3.47 Normal |
T31 | 316-383 | Sentence | denotes | Lymphocytes (%) (reference range 20–40%) Normal 17.5% Normal Normal |
T32 | 384-452 | Sentence | denotes | HsCRP (mg/L) (reference range 0–5 mg/L) 6.65 23.6 Not available 12.2 |
T33 | 453-516 | Sentence | denotes | Respiratory pathogens* Negative Negative Not available Negative |
T34 | 517-620 | Sentence | denotes | PET/CT findings Number of affected lobes 2 (RUL, LLL) 5 (all lobes) 3 (RUL, RLL, LLL) 3 (RML, RLL, LLL) |
T35 | 621-717 | Sentence | denotes | Lung CT features GGO GGO and consolidative opacities GGO GGO with interlobular septal thickening |
T36 | 718-741 | Sentence | denotes | SUVmax 4.6 7.9 12.2 9.3 |
T37 | 742-899 | Sentence | denotes | LN involvement Absent Right subclavian region, mediastinum Right supraclavicular region, mediastinum Right subclavian region, mediastinum, right hilar region |
T38 | 900-921 | Sentence | denotes | LN SUVmax – 7 5.4 5.5 |
T39 | 922-972 | Sentence | denotes | Concomitant diseases** Absent Absent Absent Absent |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
73 | 561-604 | Gene | denotes | RUL, LLL) 5 (all lobes) 3 (RUL, RLL, LLL) 3 | |
74 | 0-7 | Species | denotes | Patient | Tax:9606 |
75 | 35-40 | Species | denotes | Woman | Tax:9606 |
76 | 41-46 | Species | denotes | Woman | Tax:9606 |
77 | 453-464 | Species | denotes | Respiratory | Tax:12814 |
78 | 88-93 | Disease | denotes | Fever | MESH:D005334 |
79 | 95-112 | Disease | denotes | sore throat Fever | MESH:D010608 |
80 | 114-121 | Disease | denotes | fatigue | MESH:D005221 |
81 | 123-142 | Disease | denotes | dizziness Back pain | MESH:D004244 |
82 | 144-159 | Disease | denotes | dry cough Fever | MESH:D003371 |
83 | 168-177 | Disease | denotes | dry cough | MESH:D003371 |
84 | 179-186 | Disease | denotes | myalgia | MESH:D063806 |
85 | 192-199 | Disease | denotes | fatigue | MESH:D005221 |