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PMC:7079563 / 1077-26726 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
44 20-37 Species denotes novel coronavirus Tax:2697049
45 64-72 Species denotes patients Tax:9606
46 95-104 Species denotes 2019-nCoV Tax:2697049
47 122-139 Species denotes human coronavirus Tax:694448
48 163-172 Species denotes 2019-nCoV Tax:2697049
49 188-199 Species denotes coronavirus Tax:694448
50 224-230 Species denotes humans Tax:9606
51 250-255 Species denotes human Tax:9606
52 256-269 Species denotes coronaviruses Tax:11118
53 366-374 Species denotes SARS-CoV Tax:694009
54 376-384 Species denotes MERS-CoV Tax:1335626
55 389-398 Species denotes 2019-nCoV Tax:2697049
56 489-495 Species denotes humans Tax:9606
57 546-555 Species denotes 2019-nCoV Tax:2697049
58 698-707 Species denotes 2019-nCoV Tax:2697049
59 749-757 Species denotes patients Tax:9606
60 811-820 Species denotes 2019-nCoV Tax:2697049
61 295-300 Species denotes NL-63 Tax:277944
62 302-306 Species denotes 229E Tax:11137
63 308-312 Species denotes HKU1 Tax:290028
64 317-321 Species denotes OC43 Tax:31631
65 54-63 Disease denotes pneumonia MESH:D011014
66 470-485 Disease denotes acute infection MESH:D007239
67 740-748 Disease denotes infected MESH:D007239
69 852-862 Disease denotes pneumonias MESH:D011014
71 933-942 Disease denotes pneumonia MESH:D011014
98 1167-1212 Species denotes Severe acute respiratory syndrome coronavirus Tax:694009
99 1214-1222 Species denotes SARS-CoV Tax:694009
100 1229-1284 Species denotes Middle-East respiratory syndrome coronavirus (MERS-CoV) Tax:1335626
101 1286-1307 Species denotes avian influenza virus Tax:11309
102 1360-1375 Species denotes new coronavirus Tax:2697049
103 1394-1403 Species denotes 2019-nCoV Tax:2697049
104 1925-1933 Species denotes patients Tax:9606
105 1955-1964 Species denotes 2019-nCoV Tax:2697049
106 2069-2074 Species denotes human Tax:9606
107 2078-2083 Species denotes human Tax:9606
108 2137-2146 Species denotes 2019-nCoV Tax:2697049
109 2152-2160 Species denotes patients Tax:9606
110 2183-2188 Species denotes human Tax:9606
111 2192-2197 Species denotes human Tax:9606
112 2254-2263 Species denotes 2019-nCoV Tax:2697049
113 2295-2300 Species denotes human Tax:9606
114 2304-2309 Species denotes human Tax:9606
115 2499-2508 Species denotes 2019-nCoV Tax:2697049
116 2658-2666 Species denotes patients Tax:9606
117 2749-2766 Species denotes novel coronavirus Tax:2697049
118 976-985 Disease denotes pneumonia MESH:D011014
119 1568-1577 Disease denotes pneumonia MESH:D011014
120 1637-1642 Disease denotes death MESH:D003643
121 1911-1921 Disease denotes infections MESH:D007239
122 1943-1951 Disease denotes infected MESH:D007239
123 2125-2133 Disease denotes infected MESH:D007239
162 3808-3816 Species denotes patients Tax:9606
163 3862-3870 Species denotes patients Tax:9606
164 4053-4061 Species denotes patients Tax:9606
165 4203-4220 Species denotes novel coronavirus Tax:2697049
166 4277-4285 Species denotes patients Tax:9606
167 4331-4348 Species denotes novel coronavirus Tax:2697049
168 4473-4495 Species denotes 2019 novel coronavirus Tax:2697049
169 4497-4506 Species denotes 2019-nCoV Tax:2697049
170 4552-4561 Species denotes 2019-nCoV Tax:2697049
171 4648-4655 Species denotes patient Tax:9606
172 4681-4686 Species denotes woman Tax:9606
173 4819-4828 Species denotes 2019-nCoV Tax:2697049
174 4962-4969 Species denotes patient Tax:9606
175 4984-4989 Species denotes woman Tax:9606
176 5065-5073 Species denotes patients Tax:9606
177 5299-5304 Species denotes human Tax:9606
178 5308-5313 Species denotes human Tax:9606
179 5471-5480 Species denotes 2019-nCoV Tax:2697049
180 5581-5590 Species denotes 2019-nCoV Tax:2697049
181 5658-5663 Species denotes human Tax:9606
182 5667-5672 Species denotes human Tax:9606
183 5799-5808 Species denotes 2019-nCoV Tax:2697049
184 6026-6035 Species denotes 2019-nCoV Tax:2697049
185 6251-6259 Species denotes patients Tax:9606
186 6275-6284 Species denotes 2019-nCoV Tax:2697049
187 6449-6458 Species denotes 2019-nCoV Tax:2697049
188 3768-3777 Disease denotes pneumonia MESH:D011014
189 3902-3911 Disease denotes pneumonia MESH:D011014
190 4067-4076 Disease denotes pneumonia MESH:D011014
191 4314-4323 Disease denotes infection MESH:D007239
192 4404-4409 Disease denotes death MESH:D003643
193 4603-4611 Disease denotes infected MESH:D007239
194 5178-5188 Disease denotes infections MESH:D007239
195 5453-5461 Disease denotes infected MESH:D007239
196 5709-5714 Disease denotes death MESH:D003643
197 6324-6333 Disease denotes pneumonia MESH:D011014
198 6493-6499 Disease denotes deaths MESH:D003643
199 6543-6552 Disease denotes infection MESH:D007239
201 3626-3635 Species denotes 2019-nCoV Tax:2697049
207 3283-3292 Species denotes 2019-nCoV Tax:2697049
208 3503-3509 Species denotes people Tax:9606
209 2908-2927 Disease denotes 2019-nCoV pneumonia MESH:C000657245
210 3068-3074 Disease denotes deaths MESH:D003643
211 3178-3197 Disease denotes 2019-nCoV infection MESH:C000657245
217 6648-6657 Species denotes 2019-nCoV Tax:2697049
218 6898-6906 Species denotes patients Tax:9606
219 6949-6957 Species denotes patients Tax:9606
220 7588-7593 Disease denotes fever MESH:D005334
221 7637-7646 Disease denotes infection MESH:D007239
223 8134-8139 Species denotes Human Tax:9606
261 8154-8159 Species denotes Human Tax:9606
262 8160-8173 Species denotes coronaviruses Tax:11118
263 8175-8179 Species denotes CoVs Tax:11118
264 8396-8401 Species denotes human Tax:9606
265 8402-8406 Species denotes CoVs Tax:11118
266 8414-8427 Species denotes coronaviruses Tax:11118
267 8429-8438 Species denotes HCoV-229E Tax:11137
268 8443-8452 Species denotes HCoV-NL63 Tax:277944
269 8462-8477 Species denotes β-coronaviruses Tax:694002
270 8479-8488 Species denotes HCoV-OC43 Tax:31631
271 8493-8502 Species denotes HCoV-HKU1 Tax:290028
272 8670-8677 Species denotes infants Tax:9606
273 8679-8687 Species denotes children Tax:9606
274 8725-8729 Species denotes CoVs Tax:11118
275 8783-8828 Species denotes Severe acute respiratory syndrome coronavirus Tax:694009
276 8830-8838 Species denotes SARS-CoV Tax:694009
277 9004-9059 Species denotes Middle-East respiratory syndrome coronavirus (MERS-CoV) Tax:1335626
278 9170-9187 Species denotes novel coronavirus Tax:2697049
279 9189-9198 Species denotes 2019-nCoV Tax:2697049
280 9233-9236 Species denotes CoV Tax:11118
281 9305-9313 Species denotes SARS-CoV Tax:694009
282 9324-9332 Species denotes MERS-CoV Tax:1335626
283 9377-9386 Species denotes 2019-nCoV Tax:2697049
284 9468-9477 Species denotes 2019-nCoV Tax:2697049
285 9550-9561 Species denotes SARS-CoV (2 Tax:2697049
286 9569-9577 Species denotes MERS-CoV Tax:1335626
287 9732-9741 Species denotes 2019-nCoV Tax:2697049
288 8224-8267 Disease denotes hepatic and central nervous system diseases MESH:D002493
289 8269-8278 Disease denotes Infection MESH:D007239
290 8366-8371 Disease denotes death MESH:D003643
291 8550-8575 Disease denotes upper respiratory disease MESH:D012141
292 8585-8596 Disease denotes common cold MESH:D003139
293 8656-8666 Disease denotes infections MESH:D007239
294 8748-8768 Disease denotes respiratory diseases MESH:D012140
295 8979-8985 Disease denotes deaths MESH:D003643
296 9097-9105 Disease denotes infected MESH:D007239
297 9120-9126 Disease denotes deaths MESH:D003643
299 9793-9812 Disease denotes 2019-nCoV infection MESH:C000657245
329 10816-10825 Gene denotes cytokines
330 9882-9890 Species denotes SARS-CoV Tax:694009
331 9895-9903 Species denotes MERS-CoV Tax:1335626
332 9910-9918 Species denotes patients Tax:9606
333 10029-10037 Species denotes patients Tax:9606
334 10271-10280 Species denotes 2019-nCoV Tax:2697049
335 10281-10289 Species denotes patients Tax:9606
336 10364-10372 Species denotes MERS-CoV Tax:1335626
337 10376-10384 Species denotes SARS-CoV Tax:694009
338 10612-10620 Species denotes patients Tax:9606
339 10736-10744 Species denotes SARS-CoV Tax:694009
340 10749-10757 Species denotes MERS-CoV Tax:1335626
341 9838-9857 Disease denotes 2019-nCoV infection MESH:C000657245
342 9927-9932 Disease denotes fever MESH:D005334
343 9934-9943 Disease denotes dry cough MESH:D003371
344 9945-9952 Disease denotes dyspnea MESH:D004417
345 10043-10062 Disease denotes 2019-nCoV infection MESH:C000657245
346 10148-10159 Disease denotes sore throat MESH:D010608
347 10340-10348 Disease denotes diarrhea MESH:D003967
348 10401-10420 Disease denotes 2019-nCoV infection MESH:C000657245
349 10449-10484 Disease denotes acute respiratory distress syndrome MESH:D012128
350 10486-10498 Disease denotes septic shock MESH:D012772
351 10500-10518 Disease denotes metabolic acidosis MESH:D000138
352 10524-10532 Disease denotes bleeding MESH:D006470
353 10537-10560 Disease denotes coagulation dysfunction MESH:D001778
354 10597-10611 Disease denotes critically ill MESH:D016638
355 10646-10651 Disease denotes fever MESH:D005334
356 10707-10712 Disease denotes fever MESH:D005334
357 10759-10779 Disease denotes 2019-nCoV infections MESH:C000657245
365 10850-10859 Species denotes 2019-nCoV Tax:2697049
366 10887-10895 Species denotes SARS-CoV Tax:694009
367 11132-11140 Species denotes SARS-CoV Tax:694009
368 11520-11529 Species denotes 2019-nCoV Tax:2697049
369 11675-11684 Species denotes 2019-nCoV Tax:2697049
370 11862-11870 Species denotes patients Tax:9606
371 11618-11627 Disease denotes infection MESH:D007239
384 12314-12318 Gene denotes ACE2 Gene:59272
385 12422-12426 Gene denotes ACE2 Gene:59272
386 11968-11977 Species denotes 2019-nCoV Tax:2697049
387 12087-12095 Species denotes patients Tax:9606
388 12153-12160 Species denotes persons Tax:9606
389 12295-12304 Species denotes 2019-nCoV Tax:2697049
390 12335-12344 Species denotes 2019-nCoV Tax:2697049
391 12382-12391 Species denotes 2019-nCoV Tax:2697049
392 12609-12618 Species denotes 2019-nCoV Tax:2697049
393 12555-12560 Disease denotes colon MESH:D003110
394 12596-12605 Disease denotes infection MESH:D007239
395 12725-12744 Disease denotes 2019-nCoV infection MESH:C000657245
403 13329-13337 Gene denotes Envelope Gene:43740570
404 12868-12877 Species denotes 2019-nCoV Tax:2697049
405 12912-12927 Species denotes Betacoronavirus Tax:694002
406 12984-12997 Species denotes Coronaviridae Tax:11118
407 13083-13096 Species denotes coronaviruses Tax:11118
408 13098-13107 Species denotes 2019-nCoV Tax:2697049
409 13210-13221 Species denotes coronavirus Tax:694448
417 14022-14031 Species denotes 2019-nCoV Tax:2697049
418 14114-14123 Species denotes 2019-nCoV Tax:2697049
419 14136-14140 Species denotes CoVs Tax:11118
420 14214-14223 Species denotes 2019-nCoV Tax:2697049
421 14320-14331 Species denotes coronavirus Tax:694448
422 14333-14357 Species denotes SARS-related coronavirus Tax:694009
423 14384-14388 Species denotes CoVs Tax:11118
437 13485-13494 Species denotes 2019-nCoV Tax:2697049
438 13525-13533 Species denotes SARS-CoV Tax:694009
439 13560-13563 Species denotes CoV Tax:11118
440 13608-13617 Species denotes 2019-nCoV Tax:2697049
441 13651-13660 Species denotes SARSr-CoV Tax:694009
442 13665-13673 Species denotes SARS-CoV Tax:694009
443 13736-13749 Species denotes coronaviruses Tax:11118
444 13755-13758 Species denotes CoV Tax:11118
445 13866-13875 Species denotes 2019-nCoV Tax:2697049
446 13895-13919 Species denotes SARS related coronavirus Tax:694009
447 13921-13930 Species denotes SARSr-CoV Tax:694009
448 13564-13570 CellLine denotes RaTG13 CVCL:AR51
449 13759-13765 CellLine denotes RaTG13 CVCL:AR51
482 16142-16146 Gene denotes ACE2 Gene:59272
483 16220-16223 Gene denotes Cat Gene:12359
484 17104-17107 Gene denotes Cat Gene:12359
485 16147-16167 Species denotes African green monkey Tax:9534
486 16179-16189 Species denotes R. sinicus Tax:89399
487 16191-16196 Species denotes Swine Tax:9823
488 16197-16213 Species denotes Malayan pangolin Tax:9974
489 16214-16219 Species denotes Mouse Tax:10090
490 16224-16229 Species denotes Camel Tax:9837
491 16235-16244 Species denotes Bos mutus Tax:72004
492 16245-16264 Species denotes Erinaceus europaeus Tax:9365
493 16265-16280 Species denotes Cavia porcellus Tax:10141
494 16281-16303 Species denotes Phascolarctos cinereus Tax:38626
495 16304-16324 Species denotes Sarcophilus harrisii Tax:9305
496 16325-16336 Species denotes Tiger Snake Tax:8663
497 16337-16348 Species denotes Parus major Tax:9157
498 16349-16362 Species denotes Gallus gallus Tax:9031
499 16363-16368 Species denotes Human Tax:9606
500 16471-16491 Species denotes African green monkey Tax:9534
501 16692-16702 Species denotes R. sinicus Tax:89399
502 16794-16799 Species denotes Swine Tax:9823
503 16891-16907 Species denotes Malayan pangolin Tax:9974
504 17003-17008 Species denotes Mouse Tax:10090
505 17203-17208 Species denotes Camel Tax:9837
506 17402-17411 Species denotes Bos mutus Tax:72004
507 17505-17524 Species denotes Erinaceus europaeus Tax:9365
508 17620-17635 Species denotes Cavia porcellus Tax:10141
509 17730-17752 Species denotes Phascolarctos cinereus Tax:38626
510 17848-17868 Species denotes Sarcophilus harrisii Tax:9305
511 17964-17975 Species denotes Tiger Snake Tax:8663
512 18066-18077 Species denotes Parus major Tax:9157
513 18167-18180 Species denotes Gallus gallus Tax:9031
515 16049-16053 Gene denotes ACE2 Gene:59272
530 18469-18472 Gene denotes cat Gene:12359
531 18294-18299 Species denotes human Tax:9606
532 18361-18370 Species denotes R.sinicus Tax:89399
533 18386-18391 Species denotes swine Tax:9823
534 18410-18426 Species denotes Malayan pangolin Tax:9974
535 18445-18450 Species denotes mouse Tax:10090
536 18491-18496 Species denotes camel Tax:9837
537 18538-18547 Species denotes Bos mutus Tax:72004
538 18566-18585 Species denotes Erinaceus europaeus Tax:9365
539 18604-18626 Species denotes Phascolarctos cinereus Tax:38626
540 18645-18665 Species denotes Sarcophilus harrisii Tax:9305
541 18684-18695 Species denotes tiger Snake Tax:8663
542 18714-18725 Species denotes Parus major Tax:9157
543 18744-18757 Species denotes Gallus gallus Tax:9031
547 18804-18808 Gene denotes ACE2 Gene:59272
548 18814-18820 Species denotes humans Tax:9606
549 18933-18939 Species denotes humans Tax:9606
588 14608-14613 Gene denotes spike Gene:43740568
589 14689-14694 Gene denotes furin Gene:5045
590 14772-14777 Gene denotes Spike Gene:43740568
591 14995-15000 Gene denotes spike Gene:43740568
592 15313-15317 Gene denotes ACE2 Gene:59272
593 15360-15364 Gene denotes ACE2 Gene:59272
594 15422-15426 Gene denotes ACE2 Gene:100144303
595 15441-15445 Gene denotes ACE2 Gene:70008
596 15503-15507 Gene denotes ACE2 Gene:59272
597 15682-15686 Gene denotes ACE2 Gene:70008
598 15712-15716 Gene denotes ACE2 Gene:59272
599 15758-15763 Gene denotes spike Gene:43740568
600 15796-15800 Gene denotes ACE2 Gene:59272
601 15814-15818 Gene denotes ACE2 Gene:59272
602 15824-15828 Gene denotes ACE2 Gene:59272
603 15889-15893 Gene denotes ACE2 Gene:59272
604 15905-15909 Gene denotes ACE2 Gene:59272
605 15820-15823 Gene denotes cat Gene:847
606 14508-14521 Species denotes coronaviruses Tax:11118
607 14790-14795 Species denotes clove Tax:219868
608 14978-14989 Species denotes coronavirus Tax:694448
609 15123-15134 Species denotes coronavirus Tax:694448
610 15268-15277 Species denotes 2019-nCoV Tax:2697049
611 15322-15330 Species denotes SARS-CoV Tax:694009
612 15354-15359 Species denotes human Tax:9606
613 15366-15375 Species denotes 2019-nCoV Tax:2697049
614 15392-15406 Species denotes horseshoe bats Tax:49442
615 15418-15421 Species denotes pig Tax:9823
616 15435-15440 Species denotes mouse Tax:10090
617 15497-15502 Species denotes human Tax:9606
618 15539-15553 Species denotes horseshoe bats Tax:49442
619 15562-15565 Species denotes pig Tax:9823
620 15570-15575 Species denotes mouse Tax:10090
621 15676-15681 Species denotes mouse Tax:10090
622 15706-15711 Species denotes human Tax:9606
623 15790-15795 Species denotes human Tax:9606
624 15883-15888 Species denotes human Tax:9606
625 15952-15961 Species denotes 2019-nCoV Tax:2697049
644 19324-19345 Species denotes environmental samples Tax:33858
645 19391-19400 Species denotes 2019-nCoV Tax:2697049
646 19615-19620 Species denotes human Tax:9606
647 19671-19676 Species denotes human Tax:9606
648 19702-19710 Species denotes SARS-CoV Tax:694009
649 19715-19723 Species denotes MERS-CoV Tax:1335626
650 19788-19794 Species denotes humans Tax:9606
651 19828-19834 Species denotes camels Tax:9837
652 19861-19870 Species denotes 2019-nCoV Tax:2697049
653 19927-19933 Species denotes humans Tax:9606
654 20016-20025 Species denotes 2019-nCoV Tax:2697049
655 20184-20190 Species denotes humans Tax:9606
656 20257-20266 Species denotes 2019-nCoV Tax:2697049
657 20280-20283 Species denotes CoV Tax:11118
658 20346-20352 Species denotes humans Tax:9606
659 19188-19207 Disease denotes 2019-nCoV pneumonia MESH:C000657245
660 20165-20183 Disease denotes 2019-nCoV infected MESH:C000657245
661 20337-20345 Disease denotes infected MESH:D007239
669 20400-20413 Species denotes coronaviruses Tax:11118
670 20485-20493 Species denotes patients Tax:9606
671 20685-20694 Species denotes 2019-nCoV Tax:2697049
672 20724-20730 Species denotes humans Tax:9606
673 21369-21378 Species denotes 2019-nCoV Tax:2697049
674 20459-20468 Disease denotes infection MESH:D007239
675 21008-21017 Disease denotes infection MESH:D007239
703 22051-22060 Species denotes 2019-nCoV Tax:2697049
704 22149-22158 Species denotes 2019-nCoV Tax:2697049
705 22260-22269 Species denotes 2019-nCoV Tax:2697049
706 22634-22640 Species denotes People Tax:9606
707 22662-22670 Species denotes Patients Tax:9606
708 23162-23171 Species denotes 2019-nCoV Tax:2697049
709 23309-23314 Species denotes human Tax:9606
710 23315-23323 Species denotes patients Tax:9606
711 23468-23476 Species denotes MERS-CoV Tax:1335626
712 23504-23509 Species denotes mouse Tax:10090
713 23518-23523 Species denotes human Tax:9606
714 23824-23832 Species denotes patients Tax:9606
715 22461-22470 Chemical denotes lopinavir MESH:D061466
716 22723-22732 Chemical denotes ribavirin MESH:D012254
717 22746-22765 Chemical denotes lopinavir-ritonavir MESH:C558899
718 23200-23210 Chemical denotes remdesivir MESH:C000606551
719 23353-23363 Chemical denotes Remdesivir MESH:C000606551
720 23556-23566 Chemical denotes remdesivir MESH:C000606551
721 21595-21617 Disease denotes coronavirus infections MESH:D018352
722 22583-22592 Disease denotes pneumonia MESH:D011014
723 23144-23153 Disease denotes infection MESH:D007239
724 23256-23275 Disease denotes 2019-nCoV infection MESH:C000657245
725 23329-23346 Disease denotes 2019-nCoV disease MESH:C000657245
726 23594-23609 Disease denotes virus infection MESH:D001102
727 23682-23702 Disease denotes 2019-nCoV infections MESH:C000657245
728 23735-23744 Disease denotes infection MESH:D007239
729 23809-23823 Disease denotes critically ill MESH:D016638
744 23916-23925 Species denotes 2019-nCoV Tax:2697049
745 24324-24333 Species denotes 2019-nCoV Tax:2697049
746 24560-24565 Species denotes human Tax:9606
747 24634-24639 Species denotes human Tax:9606
748 24833-24839 Species denotes humans Tax:9606
749 24927-24932 Species denotes human Tax:9606
750 25046-25051 Species denotes human Tax:9606
751 25095-25103 Species denotes SARS-CoV Tax:694009
752 25105-25113 Species denotes MERS-CoV Tax:1335626
753 25127-25132 Species denotes Ebola Tax:1570291
754 25146-25155 Species denotes 2019-nCoV Tax:2697049
755 25463-25468 Species denotes human Tax:9606
756 24428-24447 Disease denotes 2019-nCoV pneumonia MESH:C000657245
757 24457-24475 Disease denotes infectious disease MESH:D003141

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 8236-8258 Body_part denotes central nervous system http://purl.org/sig/ont/fma/fma55675
T2 9994-9999 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T3 10153-10159 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738
T4 10210-10233 Body_part denotes lower respiratory tract http://purl.org/sig/ont/fma/fma45662
T5 10301-10311 Body_part denotes intestinal http://purl.org/sig/ont/fma/fma7199
T6 10816-10825 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T7 11188-11211 Body_part denotes upper respiratory tract http://purl.org/sig/ont/fma/fma45661
T8 12438-12443 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T9 12453-12457 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T10 12462-12467 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T11 12469-12478 Body_part denotes esophagus http://purl.org/sig/ont/fma/fma7131
T12 12497-12513 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T13 12508-12513 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T14 12530-12541 Body_part denotes enterocytes http://purl.org/sig/ont/fma/fma62122
T15 12545-12550 Body_part denotes ileum http://purl.org/sig/ont/fma/fma7208
T16 12555-12560 Body_part denotes colon http://purl.org/sig/ont/fma/fma14543
T17 12589-12595 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T18 12851-12857 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T19 13156-13159 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T20 13269-13275 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T21 13433-13449 Body_part denotes structural genes http://purl.org/sig/ont/fma/fma74402
T22 13472-13478 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T23 13805-13815 Body_part denotes nucleotide http://purl.org/sig/ont/fma/fma82740
T24 13944-13951 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T25 14540-14544 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T26 14614-14621 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T27 14752-14770 Body_part denotes cellular membranes http://purl.org/sig/ont/fma/fma63841
T28 14966-14974 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T29 15001-15008 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T30 15031-15041 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T31 15292-15296 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T32 16015-16025 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T33 16118-16128 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T34 18890-18900 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T35 21454-21460 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T36 21462-21485 Body_part denotes lower respiratory tract http://purl.org/sig/ont/fma/fma45662
T37 21498-21503 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T38 21508-21513 Body_part denotes stool http://purl.org/sig/ont/fma/fma64183
T39 22311-22314 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T40 23440-23443 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T41 23490-23495 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T42 23864-23870 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 8236-8258 Body_part denotes central nervous system http://purl.obolibrary.org/obo/UBERON_0001017
T2 8244-8258 Body_part denotes nervous system http://purl.obolibrary.org/obo/UBERON_0001016
T3 9994-9999 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T4 10153-10159 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341
T5 10210-10233 Body_part denotes lower respiratory tract http://purl.obolibrary.org/obo/UBERON_0001558
T6 10216-10233 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T7 11188-11211 Body_part denotes upper respiratory tract http://purl.obolibrary.org/obo/UBERON_0001557
T8 11194-11211 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T9 12453-12457 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T10 12469-12478 Body_part denotes esophagus http://purl.obolibrary.org/obo/UBERON_0001043
T11 12545-12550 Body_part denotes ileum http://purl.obolibrary.org/obo/UBERON_0002116
T12 12555-12560 Body_part denotes colon http://purl.obolibrary.org/obo/UBERON_0001155
T13 12589-12595 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T14 13383-13387 Body_part denotes tail http://purl.obolibrary.org/obo/UBERON_0002415
T15 21454-21460 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T16 21462-21485 Body_part denotes lower respiratory tract http://purl.obolibrary.org/obo/UBERON_0001558
T17 21468-21485 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T18 21498-21503 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T19 21508-21513 Body_part denotes stool http://purl.obolibrary.org/obo/UBERON_0001988
T20 21971-21976 Body_part denotes scale http://purl.obolibrary.org/obo/UBERON_0002542

LitCovid_AGAC

Id Subject Object Predicate Lexical cue
p22323s16 10787-10825 MPA denotes production of high levels of cytokines

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T6 54-63 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T7 366-374 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T8 476-485 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T9 852-862 Disease denotes pneumonias http://purl.obolibrary.org/obo/MONDO_0005249
T10 933-942 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T11 976-985 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T12 1167-1200 Disease denotes Severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T13 1214-1222 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T14 1286-1301 Disease denotes avian influenza http://purl.obolibrary.org/obo/MONDO_0018695
T15 1292-1301 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T16 1568-1577 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T17 1911-1924 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T18 2918-2927 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T19 3178-3197 Disease denotes 2019-nCoV infection http://purl.obolibrary.org/obo/MONDO_0100096
T20 3188-3197 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T21 3768-3777 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T22 3902-3911 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T23 4067-4076 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T24 4314-4323 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T25 5178-5191 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T26 6324-6333 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T27 6543-6552 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T28 7637-7646 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T29 8236-8267 Disease denotes central nervous system diseases http://purl.obolibrary.org/obo/MONDO_0002602
T30 8269-8278 Disease denotes Infection http://purl.obolibrary.org/obo/MONDO_0005550
T31 8556-8575 Disease denotes respiratory disease http://purl.obolibrary.org/obo/MONDO_0005087
T32 8585-8596 Disease denotes common cold http://purl.obolibrary.org/obo/MONDO_0005709
T33 8656-8669 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T34 8748-8768 Disease denotes respiratory diseases http://purl.obolibrary.org/obo/MONDO_0005087
T35 8783-8816 Disease denotes Severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T36 8830-8838 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T37 9305-9313 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T38 9550-9558 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T39 9793-9812 Disease denotes 2019-nCoV infection http://purl.obolibrary.org/obo/MONDO_0100096
T40 9803-9812 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T41 9838-9857 Disease denotes 2019-nCoV infection http://purl.obolibrary.org/obo/MONDO_0100096
T42 9848-9857 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T43 9882-9890 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T44 10043-10062 Disease denotes 2019-nCoV infection http://purl.obolibrary.org/obo/MONDO_0100096
T45 10053-10062 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T46 10148-10159 Disease denotes sore throat http://purl.obolibrary.org/obo/MONDO_0002258
T47 10340-10348 Disease denotes diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T48 10376-10384 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T49 10401-10420 Disease denotes 2019-nCoV infection http://purl.obolibrary.org/obo/MONDO_0100096
T50 10411-10420 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T51 10449-10484 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T52 10455-10484 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T53 10500-10518 Disease denotes metabolic acidosis http://purl.obolibrary.org/obo/MONDO_0000440
T54 10510-10518 Disease denotes acidosis http://purl.obolibrary.org/obo/MONDO_0006022
T55 10736-10744 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T56 10759-10779 Disease denotes 2019-nCoV infections http://purl.obolibrary.org/obo/MONDO_0100096
T57 10887-10895 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T58 11132-11140 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T59 11618-11627 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T60 12596-12605 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T61 12725-12744 Disease denotes 2019-nCoV infection http://purl.obolibrary.org/obo/MONDO_0100096
T62 12735-12744 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T63 13525-13533 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T64 13665-13673 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T65 13726-13730 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T66 13895-13899 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T67 14333-14337 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T68 15322-15330 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T69 16235-16238 Disease denotes Bos http://purl.obolibrary.org/obo/MONDO_0008157
T70 17402-17405 Disease denotes Bos http://purl.obolibrary.org/obo/MONDO_0008157
T71 18538-18541 Disease denotes Bos http://purl.obolibrary.org/obo/MONDO_0008157
T72 19198-19207 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T73 19702-19710 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T74 20165-20183 Disease denotes 2019-nCoV infected http://purl.obolibrary.org/obo/MONDO_0100096
T75 20459-20468 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T76 21008-21017 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T77 21607-21617 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T78 22365-22369 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T79 22583-22592 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T80 22676-22680 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T81 23017-23019 Disease denotes GS http://purl.obolibrary.org/obo/MONDO_0005773
T82 23144-23153 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T83 23256-23275 Disease denotes 2019-nCoV infection http://purl.obolibrary.org/obo/MONDO_0100096
T84 23266-23275 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T85 23463-23467 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T86 23588-23593 Disease denotes Ebola http://purl.obolibrary.org/obo/MONDO_0005737
T87 23594-23609 Disease denotes virus infection http://purl.obolibrary.org/obo/MONDO_0005108
T88 23600-23609 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T89 23682-23702 Disease denotes 2019-nCoV infections http://purl.obolibrary.org/obo/MONDO_0100096
T90 23735-23744 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T91 24438-24447 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T92 24457-24475 Disease denotes infectious disease http://purl.obolibrary.org/obo/MONDO_0005550
T93 25095-25103 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T94 25127-25132 Disease denotes Ebola http://purl.obolibrary.org/obo/MONDO_0005737

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T5 18-19 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T6 122-127 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T7 224-230 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T8 250-255 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T9 489-495 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T10 639-646 http://purl.obolibrary.org/obo/CLO_0009985 denotes focuses
T11 1097-1098 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T12 1302-1307 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T13 1358-1359 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T14 1501-1513 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T15 1555-1557 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T16 1565-1567 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T17 1798-1799 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T18 2069-2074 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T19 2078-2083 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T20 2183-2188 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T21 2192-2197 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T22 2295-2300 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T23 2304-2309 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T24 2533-2536 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T25 2782-2789 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T26 3734-3735 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T27 3794-3795 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T28 3818-3820 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T29 4029-4030 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T30 4104-4107 http://purl.obolibrary.org/obo/CLO_0001053 denotes 121
T31 4248-4256 http://purl.obolibrary.org/obo/OBI_0100026 denotes organism
T32 4248-4256 http://purl.obolibrary.org/obo/UBERON_0000468 denotes organism
T33 4258-4260 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T34 4274-4276 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T35 4431-4436 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T36 4659-4660 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T37 4834-4837 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T38 4974-4975 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T39 5299-5304 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T40 5308-5313 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T41 5658-5666 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human to
T42 5667-5672 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T43 5687-5689 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T44 6358-6360 http://purl.obolibrary.org/obo/CLO_0001302 denotes 34
T45 6716-6717 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T46 7332-7333 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T47 8134-8139 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T48 8154-8159 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T49 8236-8258 http://purl.obolibrary.org/obo/UBERON_0001017 denotes central nervous system
T50 8236-8258 http://www.ebi.ac.uk/efo/EFO_0000302 denotes central nervous system
T51 8236-8258 http://www.ebi.ac.uk/efo/EFO_0000908 denotes central nervous system
T52 8396-8401 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T53 8634-8635 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T54 8987-8990 http://purl.obolibrary.org/obo/CLO_0050884 denotes Ten
T55 9070-9072 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T56 9254-9255 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T57 9458-9463 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T58 9994-9999 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T59 10182-10187 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T60 10210-10233 http://purl.obolibrary.org/obo/UBERON_0001558 denotes lower respiratory tract
T61 10301-10311 http://purl.obolibrary.org/obo/UBERON_0000160 denotes intestinal
T62 10301-10311 http://www.ebi.ac.uk/efo/EFO_0000834 denotes intestinal
T63 10922-10929 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T64 11582-11583 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T65 11790-11799 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremely
T66 12138-12143 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T67 12320-12321 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T68 12438-12443 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T69 12453-12457 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T70 12462-12467 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T71 12469-12478 http://purl.obolibrary.org/obo/UBERON_0001043 denotes esophagus
T72 12486-12513 http://purl.obolibrary.org/obo/CL_0000079 denotes stratified epithelial cells
T73 12545-12550 http://purl.obolibrary.org/obo/UBERON_0002116 denotes ileum
T74 12555-12560 http://purl.obolibrary.org/obo/UBERON_0001155 denotes colon
T75 12620-12622 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T76 12703-12704 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T77 13200-13201 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T78 13276-13288 http://purl.obolibrary.org/obo/OBI_0000245 denotes organization
T79 13342-13350 http://purl.obolibrary.org/obo/UBERON_0000158 denotes Membrane
T80 13380-13381 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T81 13383-13387 http://purl.obolibrary.org/obo/UBERON_0002415 denotes tail
T82 13403-13408 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T83 13444-13449 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T84 13556-13559 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T85 13722-13725 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T86 13751-13754 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T87 13770-13773 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T88 13893-13894 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T89 14540-14544 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T90 14761-14770 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membranes
T91 14781-14782 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T92 14864-14866 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T93 14924-14925 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T94 14937-14939 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T95 14937-14939 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T96 15009-15012 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T97 15114-15119 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T98 15158-15160 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T99 15173-15174 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T100 15292-15296 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T101 15354-15359 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T102 15402-15406 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T103 15435-15440 http://purl.obolibrary.org/obo/CLO_0007836 denotes mouse
T104 15497-15502 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T105 15508-15511 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T106 15549-15553 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T107 15570-15575 http://purl.obolibrary.org/obo/CLO_0007836 denotes mouse
T108 15676-15681 http://purl.obolibrary.org/obo/CLO_0007836 denotes mouse
T109 15706-15711 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T110 15790-15795 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T111 15883-15888 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T112 16161-16167 http://purl.obolibrary.org/obo/NCBITaxon_9479 denotes monkey
T113 16214-16219 http://purl.obolibrary.org/obo/CLO_0007836 denotes Mouse
T114 16224-16229 http://purl.obolibrary.org/obo/NCBITaxon_9837 denotes Camel
T115 16230-16234 http://purl.obolibrary.org/obo/NCBITaxon_9925 denotes Goat
T116 16265-16280 http://purl.obolibrary.org/obo/NCBITaxon_10141 denotes Cavia porcellus
T117 16349-16362 http://purl.obolibrary.org/obo/NCBITaxon_9031 denotes Gallus gallus
T118 16363-16368 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T119 16485-16491 http://purl.obolibrary.org/obo/NCBITaxon_9479 denotes monkey
T120 17003-17008 http://purl.obolibrary.org/obo/CLO_0007836 denotes Mouse
T121 17203-17208 http://purl.obolibrary.org/obo/NCBITaxon_9837 denotes Camel
T122 17303-17307 http://purl.obolibrary.org/obo/NCBITaxon_9925 denotes Goat
T123 17620-17635 http://purl.obolibrary.org/obo/NCBITaxon_10141 denotes Cavia porcellus
T124 18167-18180 http://purl.obolibrary.org/obo/NCBITaxon_9031 denotes Gallus gallus
T125 18294-18299 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T126 18315-18321 http://purl.obolibrary.org/obo/NCBITaxon_9479 denotes monkey
T127 18356-18359 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T128 18445-18450 http://purl.obolibrary.org/obo/CLO_0007836 denotes mouse
T129 18491-18496 http://purl.obolibrary.org/obo/NCBITaxon_9837 denotes camel
T130 18515-18519 http://purl.obolibrary.org/obo/NCBITaxon_9925 denotes goat
T131 18744-18757 http://purl.obolibrary.org/obo/NCBITaxon_9031 denotes Gallus gallus
T132 18814-18820 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T133 18825-18827 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T134 18834-18841 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T135 18933-18939 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T136 18950-18957 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T137 19435-19436 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T138 19453-19460 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T139 19546-19550 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T140 19566-19570 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T141 19615-19620 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T142 19653-19658 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T143 19664-19667 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T144 19671-19679 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human is
T145 19740-19744 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T146 19788-19794 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T147 19828-19834 http://purl.obolibrary.org/obo/NCBITaxon_9837 denotes camels
T148 19895-19906 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat but was
T149 19927-19933 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T150 19993-19995 http://purl.obolibrary.org/obo/CLO_0001302 denotes 34
T151 19999-20001 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T152 20026-20029 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T153 20184-20190 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T154 20195-20198 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T155 20276-20279 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T156 20346-20352 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T157 20354-20356 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T158 20695-20698 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T159 20724-20730 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T160 21043-21050 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T161 21462-21485 http://purl.obolibrary.org/obo/UBERON_0001558 denotes lower respiratory tract
T162 21498-21503 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T163 21498-21503 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T164 21589-21594 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T165 21663-21664 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T166 21774-21775 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T167 21803-21804 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T168 21948-21949 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T169 22030-22038 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T170 22108-22111 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T171 22132-22140 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T172 22241-22251 http://purl.obolibrary.org/obo/CLO_0001658 denotes activities
T173 22500-22502 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T174 23128-23133 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T175 23309-23314 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T176 23348-23350 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T177 23364-23367 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T178 23396-23397 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T179 23444-23451 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T180 23481-23495 http://purl.obolibrary.org/obo/CL_0000010 denotes cultured cells
T181 23504-23509 http://purl.obolibrary.org/obo/CLO_0007836 denotes mouse
T182 23518-23523 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T183 23524-23531 http://purl.obolibrary.org/obo/NCBITaxon_9443 denotes primate
T184 23594-23599 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T185 23769-23772 http://purl.obolibrary.org/obo/CL_0000784 denotes IPC
T186 23864-23870 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T187 23983-23986 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T188 24083-24090 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T189 24389-24394 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T190 24451-24452 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T191 24512-24519 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T192 24560-24565 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T193 24634-24639 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T194 24640-24650 http://purl.obolibrary.org/obo/CLO_0001658 denotes activities
T195 24704-24711 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T196 24742-24749 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T197 24803-24810 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T198 24833-24839 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T199 24927-24932 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T200 24950-24951 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T201 25000-25007 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T202 25046-25058 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human beings
T203 25079-25086 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T204 25303-25309 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T205 25463-25468 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T5 295-297 Chemical denotes NL http://purl.obolibrary.org/obo/CHEBI_141422
T6 592-600 Chemical denotes medicine http://purl.obolibrary.org/obo/CHEBI_23888
T7 2799-2804 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T8 3578-3586 Chemical denotes carriers http://purl.obolibrary.org/obo/CHEBI_78059
T9 13239-13247 Chemical denotes electron http://purl.obolibrary.org/obo/CHEBI_10545
T10 13774-13776 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T11 13805-13815 Chemical denotes nucleotide http://purl.obolibrary.org/obo/CHEBI_36976
T12 13944-13951 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T13 14614-14621 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T14 14637-14641 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T15 14937-14939 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T16 14966-14974 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T17 15001-15008 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T18 15031-15041 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T19 15031-15036 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T20 15037-15041 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T21 15820-15823 Chemical denotes cat http://purl.obolibrary.org/obo/CHEBI_32402
T22 16015-16025 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T23 16015-16020 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T24 16021-16025 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T25 16118-16128 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T26 16118-16123 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T27 16124-16128 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T28 18469-18472 Chemical denotes cat http://purl.obolibrary.org/obo/CHEBI_32402
T29 18890-18900 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T30 18890-18895 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T31 18896-18900 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T32 21096-21105 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T33 21126-21134 Chemical denotes antigens http://purl.obolibrary.org/obo/CHEBI_59132
T34 21222-21234 Chemical denotes nucleic acid http://purl.obolibrary.org/obo/CHEBI_33696
T35 21230-21234 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T36 21379-21392 Chemical denotes nucleic acids http://purl.obolibrary.org/obo/CHEBI_33696
T37 21387-21392 Chemical denotes acids http://purl.obolibrary.org/obo/CHEBI_37527
T38 21552-21561 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T39 21765-21770 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T40 21864-21868 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T41 21999-22004 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T42 22071-22075 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T43 22097-22107 Chemical denotes nelfinavir http://purl.obolibrary.org/obo/CHEBI_7496
T44 22122-22131 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T45 22173-22185 Chemical denotes pitavastatin http://purl.obolibrary.org/obo/CHEBI_32020
T46 22187-22197 Chemical denotes perampanel http://purl.obolibrary.org/obo/CHEBI_71013
T47 22203-22215 Chemical denotes praziquantel http://purl.obolibrary.org/obo/CHEBI_45267
T48 22315-22319 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T49 22326-22333 Chemical denotes Kaletra http://purl.obolibrary.org/obo/CHEBI_145924
T50 22405-22424 Chemical denotes protease inhibitors http://purl.obolibrary.org/obo/CHEBI_37670|http://purl.obolibrary.org/obo/CHEBI_60258
T52 22414-22424 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T53 22426-22435 Chemical denotes ritonavir http://purl.obolibrary.org/obo/CHEBI_45409
T54 22461-22470 Chemical denotes lopinavir http://purl.obolibrary.org/obo/CHEBI_31781
T55 22539-22546 Chemical denotes Kaletra http://purl.obolibrary.org/obo/CHEBI_145924
T56 22707-22712 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T57 22723-22732 Chemical denotes ribavirin http://purl.obolibrary.org/obo/CHEBI_63580
T58 22734-22744 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T59 22746-22765 Chemical denotes lopinavir-ritonavir http://purl.obolibrary.org/obo/CHEBI_145924
T60 22746-22755 Chemical denotes lopinavir http://purl.obolibrary.org/obo/CHEBI_31781
T61 22756-22765 Chemical denotes ritonavir http://purl.obolibrary.org/obo/CHEBI_45409
T62 22771-22786 Chemical denotes corticosteroids http://purl.obolibrary.org/obo/CHEBI_50858
T63 22816-22821 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T64 22852-22867 Chemical denotes antiviral drugs http://purl.obolibrary.org/obo/CHEBI_36044
T65 22852-22861 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T66 22862-22867 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T67 22874-22877 Chemical denotes FAD http://purl.obolibrary.org/obo/CHEBI_16238|http://purl.obolibrary.org/obo/CHEBI_57692|http://purl.obolibrary.org/obo/CHEBI_73627
T70 22887-22892 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T71 22903-22912 Chemical denotes ribavirin http://purl.obolibrary.org/obo/CHEBI_63580
T72 22914-22925 Chemical denotes penciclovir http://purl.obolibrary.org/obo/CHEBI_7956
T73 22950-22961 Chemical denotes chloroquine http://purl.obolibrary.org/obo/CHEBI_3638
T74 22990-23005 Chemical denotes antiviral drugs http://purl.obolibrary.org/obo/CHEBI_36044
T75 22990-22999 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T76 23000-23005 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T77 23017-23024 Chemical denotes GS-5734 http://purl.obolibrary.org/obo/CHEBI_145994
T78 23017-23019 Chemical denotes GS http://purl.obolibrary.org/obo/CHEBI_73516
T79 23039-23044 Chemical denotes T-705 http://purl.obolibrary.org/obo/CHEBI_134722
T80 23200-23210 Chemical denotes remdesivir http://purl.obolibrary.org/obo/CHEBI_145994
T81 23215-23226 Chemical denotes chloroquine http://purl.obolibrary.org/obo/CHEBI_3638
T82 23408-23422 Chemical denotes antiviral drug http://purl.obolibrary.org/obo/CHEBI_36044
T83 23408-23417 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T84 23418-23422 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T85 23556-23566 Chemical denotes remdesivir http://purl.obolibrary.org/obo/CHEBI_145994
T86 23769-23772 Chemical denotes IPC http://purl.obolibrary.org/obo/CHEBI_53004
T87 24078-24082 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T88 24287-24302 Chemical denotes antiviral drugs http://purl.obolibrary.org/obo/CHEBI_36044
T89 24287-24296 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T90 24297-24302 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T2 10537-10548 http://purl.obolibrary.org/obo/GO_0050817 denotes coagulation
T3 11212-11222 http://purl.obolibrary.org/obo/GO_0046903 denotes secretions
T4 14652-14663 http://purl.obolibrary.org/obo/GO_0006508 denotes proteolysis
T5 21486-21496 http://purl.obolibrary.org/obo/GO_0046903 denotes secretions
T6 24254-24271 http://purl.obolibrary.org/obo/GO_0019079 denotes viral replication
T7 24254-24271 http://purl.obolibrary.org/obo/GO_0019058 denotes viral replication
T8 24273-24285 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis
T9 25336-25343 http://purl.obolibrary.org/obo/GO_0051235 denotes storage

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T7 0-105 Sentence denotes In December 2019, a novel coronavirus was detected in pneumonia patients which was later named 2019-nCoV.
T8 106-235 Sentence denotes Since the first human coronavirus detected in the 1960s, 2019-nCoV is the seventh coronavirus that is known to infect humans [1].
T9 236-428 Sentence denotes Among all the human coronaviruses, four of them, including NL-63, 229E, HKU1 and OC43, cause mild illness, while the other three, SARS-CoV, MERS-CoV and 2019-nCoV, lead to serious disease [2].
T10 429-626 Sentence denotes To characterize the new pathogen causing acute infection in humans, researchers have conducted urgent studies on the 2019-nCoV, from its epidemiology and clinical medicine to etiology and virology.
T11 627-821 Sentence denotes This review focuses on the epidemiology and clinical manifestations of 2019-nCoV, the diagnosis and treatment of infected patients, and in particular, evidence regarding the origin of 2019-nCoV.
T12 823-882 Sentence denotes 1 Emergence and epidemic of pneumonias caused by 2019-nCoV
T13 884-942 Sentence denotes 1.1 Pathogen identification and transmission of pneumonia
T14 943-1061 Sentence denotes On 31th December 2019, the first pneumonia case of unknown etiology was reported in Wuhan City, Hubei Province, China.
T15 1062-1348 Sentence denotes In order to identify the etiology, a number of possible etiological agents were ruled out, including the Severe acute respiratory syndrome coronavirus (SARS-CoV), the Middle-East respiratory syndrome coronavirus (MERS-CoV), avian influenza virus, and other common respiratory pathogens.
T16 1349-1540 Sentence denotes Finally, a new coronavirus, temporally named 2019-nCoV, was identified to be the pathogen responsible for disease, and it was announced by World Health Organization (WHO) on 12th January [3].
T17 1541-1647 Sentence denotes As of January 11, 2020, 41 pneumonia cases were diagnosed, including seven severe cases and one death [2].
T18 1648-1756 Sentence denotes At that time, there was no evidence of person-to-person transmission according to the scientific literature.
T19 1757-1844 Sentence denotes The first “super-spreading” event became a hallmark of the epidemiology of the disease.
T20 1845-2101 Sentence denotes On January 20, 2020, in epidemiological investigations, two local infections in patients who were infected by 2019-nCoV without physical visits to Wuhan were reported in Guangdong Province, which confirmed the occurrence of human-to-human transmission [4].
T21 2102-2212 Sentence denotes Then, 14 medical staff infected by 2019-nCoV from patients further confirmed the human-to-human contagion [5].
T22 2213-2380 Sentence denotes On 21th January 2020, WHO announced that 2019-nCoV was possibly sustained through human-to-human transmission, warning the public to take self-protection measures [3].
T23 2381-2462 Sentence denotes The first of many cases, this disease was rapidly shown to cause an epidemic [6].
T24 2463-2667 Sentence denotes Due to the high transmissibility of 2019-nCoV, the Chinese government has taken quick action and various measures to deal with the epidemic, trying to prevent spread of the outbreak and to treat patients.
T25 2668-2833 Sentence denotes Researchers put much effort to understand the origin and pathophysiology of this novel coronavirus, and have been testing multiple drugs to screen effective therapy.
T26 2835-2873 Sentence denotes 1.2 Current situation of the epidemic
T27 2874-2980 Sentence denotes Until February 6, 2020, confirmed 2019-nCoV pneumonia cases were increasing with worrisome speed in China.
T28 2981-3119 Sentence denotes As of 5th February, there were 24,377 cases confirmed in mainland China, including 492 deaths, 3219 severe cases, and 901 cured cases [6].
T29 3120-3151 Sentence denotes The fatality rate was about 2%.
T30 3152-3252 Sentence denotes In addition, 175 cases of 2019-nCoV infection were confirmed in 24 other countries around the world.
T31 3253-3329 Sentence denotes The typical events during the 2019-nCoV outbreak are summarized in Table 1 .
T32 3330-3439 Sentence denotes The period from the end of December 2019 to January 2020 was the “Spring Festival travel rush” time in China.
T33 3440-3603 Sentence denotes Although the government issued an order to control the flow of people, the disease spread rapidly to other cities because of asymptomatic carriers [[7], [8], [9]].
T34 3604-3636 Sentence denotes Table 1 Key events of 2019-nCoV.
T35 3637-3652 Sentence denotes Date Key events
T36 3653-3778 Sentence denotes 31 December 2019 The Health Commission of Hubei province, China, first announced a cluster of unexplained cases of pneumonia.
T37 3779-3995 Sentence denotes 3 January 2020 A total of 44 patients (11 are severely ill, while the remaining 33 patients are in stable condition.) with pneumonia of unknown etiology have been reported to WHO by the national authorities in China.
T38 3996-4142 Sentence denotes 5 January 2020 The WHO published a document detailing 44 patients had “pneumonia of unknown etiology”, with 121 close contacts under surveillance.
T39 4143-4257 Sentence denotes 8 January 2020 The genetic sequencing demonstrated that the novel coronavirus is the potential causative organism.
T40 4258-4410 Sentence denotes 11 January 2020 41 patients have been diagnosed to have infection of the novel coronavirus, with 763 close contacts, 7 severe cases and the first death.
T41 4411-4508 Sentence denotes 12 January 2020 The virus was tentatively named by WHO as the 2019 novel coronavirus (2019-nCoV).
T42 4509-4584 Sentence denotes 13 January 2020 The first imported case of 2019-nCoV was found in Thailand.
T43 4585-4643 Sentence denotes This is the first infected person diagnosed outside China.
T44 4644-4731 Sentence denotes The patient is a 61-year-old Chinese woman living in Wuhan City, Hubei Province, China.
T45 4732-4781 Sentence denotes 16 January 2020 The first case reported in Japan.
T46 4782-4869 Sentence denotes This is the second confirmed case of 2019-nCoV that has been detected outside of China.
T47 4870-4907 Sentence denotes The person travelled to Wuhan, China.
T48 4908-4957 Sentence denotes 19 January 2020 The first case reported in Korea.
T49 4958-5043 Sentence denotes The patient was a Chinese woman who flew from Wuhan to Incheon International Airport.
T50 5044-5094 Sentence denotes Four other suspected patients were being examined.
T51 5095-5151 Sentence denotes Furthermore, the first case reported in Shenzhen, China.
T52 5152-5365 Sentence denotes 20 January 2020 Two local infections in the Chinese province of Guangdong with no direct visit to Wuhan were the first confirmed the occurrence of human-to-human transmission through epidemiological investigation.
T53 5366-5413 Sentence denotes And the first case reported in Shanghai, China.
T54 5414-5490 Sentence denotes 21 January 2020 15 health-care workers infected with the 2019-nCoV in Wuhan.
T55 5491-5605 Sentence denotes Zhejiang Province, Henan Province, Sichuan Province and Taiwa confirmed the first case of 2019-nCoV, respectively.
T56 5606-5686 Sentence denotes The WHO announced that there was possible sustained human to-human transmission.
T57 5687-5733 Sentence denotes 22–23 January 2020 17 death in Hubei Province.
T58 5734-5809 Sentence denotes America and Macao and Many provinces confirmed the first case of 2019-nCoV.
T59 5810-6050 Sentence denotes Such as Shandong Province, Yunnan Province, Hunan Province, America, Macao, Anhui Province, Fujian Province, Guizhou Province, Shanxi Province, Ningxia Autonomous Region and Hebei Province reported the first case of 2019-nCoV, respectively.
T60 6051-6204 Sentence denotes 23 January 2020 the local government in Wuhan announced the suspension of public transportation, with closure of airports, railway stations, and highways
T61 6205-6293 Sentence denotes 24 January 2020 Zhejiang and Shanghai’s first patients diagnosed with 2019-nCoV recover.
T62 6294-6432 Sentence denotes 5 February 2020 The confirmed pneumonia cases are increasing in 34 provinces, municipalities, and special administrative regions in China.
T63 6433-6529 Sentence denotes 24,377 cases of 2019-nCoV confirmed in China, including 492 deaths, 3219 serious, and 901 cured.
T64 6530-6604 Sentence denotes 175 cases of infection were confirmed in 24 other cities around the world.
T65 6606-6630 Sentence denotes 1.3 Preventive measures
T66 6631-6745 Sentence denotes To deal with the 2019-nCoV epidemic, the central and local governments of China took a series of drastic measures.
T67 6746-7014 Sentence denotes First of all, Chinese health authorities conducted an immediate investigation to characterize and control the disease, including isolation of suspected patients, monitoring of contact clinical status of patients, and developing diagnostic and treatment procedures [5].
T68 7015-7246 Sentence denotes In addition, on January 23, 2020, the local government of Wuhan announced the suspension of public transportation, closing airports, railway stations, and highways in the city, in order to prevent further disease transmission [10].
T69 7247-7431 Sentence denotes Subsequently, most provinces in China claimed “Level I Emergency Response” by taking a series of measures such as suspending public transportation and setting up community quarantines.
T70 7432-7581 Sentence denotes Particularly, the list of the first-level designated hospitals was announced, and epidemic prevention training for primary medical staff was started.
T71 7582-7858 Sentence denotes Since fever is one of typical clinical symptoms of the infection, temperature detection of incoming and outgoing personnel was implemented comprehensively in railway stations, passenger stations and other public places, in order to screen suspected cases as early as possible.
T72 7859-8072 Sentence denotes In addition, many other compulsory measures limiting population mobility, such as cancellation of mass gatherings, school closures, work-from-home arrangements, was taken to reduce within-population contact rates.
T73 8074-8127 Sentence denotes 2 Epidemiological and clinical symptoms of 2019-nCoV
T74 8129-8153 Sentence denotes 2.1 Human coronaviruses
T75 8154-8268 Sentence denotes Human coronaviruses (CoVs) could cause respiratory, gastrointestinal, hepatic and central nervous system diseases.
T76 8269-8379 Sentence denotes Infection outcomes vary from mild, self-limiting disease, to more severe manifestations and even death [1,11].
T77 8380-8769 Sentence denotes Among the seven human CoVs, two α-coronaviruses (HCoV-229E and HCoV-NL63) and two β-coronaviruses (HCoV-OC43 and HCoV-HKU1) were thought to cause only mild self-limiting upper respiratory disease, such as common cold in immunocompetent hosts, except for a few cases of severe infections in infants, children and seniors [12,13]; the other three CoVs could cause fatal respiratory diseases.
T78 8770-8986 Sentence denotes In 2002, the Severe acute respiratory syndrome coronavirus (SARS-CoV) emerged in Guangdong province, China, spreading to 37 countries, and its subsequent global epidemic was associated with 8096 cases and 774 deaths.
T79 8987-9141 Sentence denotes Ten years later, Middle-East respiratory syndrome coronavirus (MERS-CoV) spread to 27 countries, causing 2494 infected cases and 858 deaths worldwide [1].
T80 9142-9343 Sentence denotes And the recently identified novel coronavirus (2019-nCoV), was the third highly pathogenic CoV discovered, with a mortality of 2% which is much lower than that of SARS-CoV (10%) and MERS-CoV (37%) [6].
T81 9344-9607 Sentence denotes However, the transmissibility of 2019-nCoV is higher, the mean R0 (R0 is used to estimate the transmissibility of virus) of 2019-nCoV ranged from 3.3 to 5.5, and it appeared (slightly) higher than those of SARS-CoV (2–5) and MERS-CoV (2.7–3.9) [[14], [15], [16]].
T82 9608-9765 Sentence denotes Measures on ‘entry, exit and travel’ screening and restrictions are likely to reduce the effective R0, which should benefit 2019-nCoV control and prevention.
T83 9767-9812 Sentence denotes 2.2 Clinical symptoms of 2019-nCoV infection
T84 9813-9904 Sentence denotes The clinical symptoms of 2019-nCoV infection are similar to those of SARS-CoV and MERS-CoV.
T85 9905-10019 Sentence denotes Most patients present fever, dry cough, dyspnea, and bilateral ground-glass opacities on chest CT scans [4,17,18].
T86 10020-10241 Sentence denotes However, patients with 2019-nCoV infection rarely have obvious upper respiratory signs and symptoms (such as snot, sneezing, or sore throat), indicating that the virus primarily infects the lower respiratory tract [4,17].
T87 10242-10390 Sentence denotes In addition, about 20–25% of 2019-nCoV patients experience intestinal symptoms and signs (such as diarrhea), similarly to MERS-CoV or SARS-CoV [17].
T88 10391-10561 Sentence denotes In severe 2019-nCoV infection cases, the symptoms include acute respiratory distress syndrome, septic shock, metabolic acidosis, and bleeding and coagulation dysfunction.
T89 10562-10717 Sentence denotes It is worth noting that severe and critically ill patients may have moderate to low fever during the course of the disease, even without obvious fever [3].
T90 10718-10833 Sentence denotes Furthermore, like SARS-CoV and MERS-CoV, 2019-nCoV infections induce production of high levels of cytokines [2,17].
T91 10834-10896 Sentence denotes The epidemic of 2019-nCoV bears some similarities to SARS-CoV.
T92 10897-11122 Sentence denotes The outbreaks of the two viruses occurred at about the same time during the year, and they were quite stable in the environment, especially in air-conditioned space, owing to lower ambient temperature and lower humidity [19].
T93 11123-11328 Sentence denotes However, SARS-CoV had an aberrant trait that the “viral load” in upper respiratory tract secretions was low in the first 5 days of illness, then increased progressively and peaked early in the second week.
T94 11329-11498 Sentence denotes Consequently, the transmission rate was relatively low in the first days of illness, providing an opportunity for case detection and isolation to interrupt transmission.
T95 11499-11662 Sentence denotes On the contrary, for 2019-nCoV, the incubation lasts for an average of 10 days (in a reported range of 2–14 days) from infection to symptoms surfacing [2,4,17,20].
T96 11663-11926 Sentence denotes Even worse, 2019-nCoV is able to spread from one person to another even before any actual clinical manifestations, leading to “extremely challenging” conditions for detecting and isolating potential patients, which makes it more difficult to control the epidemic.
T97 11928-11967 Sentence denotes 2.3 Transmission routes of the disease
T98 11968-12165 Sentence denotes 2019-nCoV is thought to be transmitted through droplets, close contact, aerosol and maybe fecal-oral transmission, and patients in the incubation period can transmit the virus to other persons [5].
T99 12166-12313 Sentence denotes The distribution of the viral receptor can explain the pathogenic mechanisms, clinical manifestations and transmission routes of 2019-nCoV [20,21].
T100 12314-12392 Sentence denotes ACE2, a receptor for 2019-nCoV, is necessary for the viral entry of 2019-nCoV.
T101 12393-12624 Sentence denotes The ubiquitous expression of ACE2 in various cells, such as lung AT2 cells, esophagus upper, stratified epithelial cells, and absorptive enterocytes of ileum and colon may contribute to the multi-tissue infection of 2019-nCoV [22].
T102 12625-12753 Sentence denotes Therefore, besides respiratory and bodily contact, fecal-oral transmission is a potential route for 2019-nCoV infection [23,24].
T103 12755-12805 Sentence denotes 3 Biological features and origin of the 2019-nCoV
T104 12807-12833 Sentence denotes 3.1 Genomics of 2019-nCoV
T105 12834-13063 Sentence denotes According to the genome analysis, 2019-nCoV belongs to Sarbecovirus subgenus, Betacoronavirus genus of the subfamily Orthocoronavirinae in the family Coronaviridae of the suborder cornidovirineae of the order Nidovirales [20,26].
T106 13064-13264 Sentence denotes Similarly to other coronaviruses, 2019-nCoV is an enveloped, single-stranded positive-sense RNA (+ssRNA) with around 29,900 nt, showing a typical coronavirus appearance under electron microscopy [20].
T107 13265-13484 Sentence denotes The genome organization is 5′-leader-UTR-replicase-S (Spike)-E (Envelope)-M (Membrane)-N (Nucleocapsid)-3′UTRpoly (A) tail with accessory genes interspersed within the structural genes and the 3′ end of the genome [26].
T108 13485-13576 Sentence denotes 2019-nCoV shares 79.5% nt identity with SARS-CoV and 96% identity with bat-CoV-RaTG13 [20].
T109 13577-13855 Sentence denotes The genetic characteristics of 2019-nCoV are significantly different from SARSr-CoV and SARS-CoV, which are closely related only to the specific bat SARS-like coronaviruses, bat-CoV-RaTG13 and bat-SL-CoVZC45, with 96% and 86.9% nucleotide sequence identities, respectively [20].
T110 13856-13985 Sentence denotes Therefore 2019-nCoV is considered as a SARS related coronavirus (SARSr-CoV) by pairwise protein sequence analysis (Fig. 1 ) [20].
T111 13986-14032 Sentence denotes Fig. 1 The evolutionary position of 2019-nCoV.
T112 14033-14203 Sentence denotes The phylogenetic tree was constructed based on the complete genomic sequences of 2019-nCoV and related CoVs by using the neighbor-joining (NJ) method with 1000 bootstrap.
T113 14204-14283 Sentence denotes The novel 2019-nCoV detected strains were indicated in bold with solid squares.
T114 14284-14358 Sentence denotes Abbreviations are as follows: SARSr coronavirus, SARS-related coronavirus.
T115 14359-14415 Sentence denotes The accession numbers of CoVs were showed in the figure.
T116 14416-14453 Sentence denotes Bootstrap values above 50 were shown.
T117 14455-14487 Sentence denotes 3.2 Receptor usage of 2019-nCoV
T118 14488-14569 Sentence denotes The prerequisite of coronaviruses invading the host-cell is to bind to receptors.
T119 14570-14771 Sentence denotes Following receptor binding, the viral spike protein is cleaved via acid-dependent proteolysis by cathepsin, TMPRRS2 or furin protease, followed by fusion of the viral envelop to the cellular membranes.
T120 14772-14947 Sentence denotes Spike is a large, clove-shaped trimer, which can be cleaved by proteases into an N-terminal S1 subunit containing the receptor binding domain (RBD) and a C-terminal S2 region.
T121 14948-15238 Sentence denotes Compared to other proteins of coronavirus, the spike protein has the most variable amino acid sequences which results from the strongest positive selection among all genes of coronavirus to adapt to its hosts [27].The RBD is a major determinant of host range and cross-species transmission.
T122 15239-15345 Sentence denotes Recently results showed that 2019-nCoV uses the same cell entry receptor, ACE2, as SARS-CoV [21,24,20,28].
T123 15346-15472 Sentence denotes Besides human ACE2, 2019-nCoV can use Chinese horseshoe bats, civet, or pig ACE2 but not mouse ACE2 as an entry receptor [24].
T124 15473-15769 Sentence denotes One explanation is that human ACE2 has high homology with Chinese horseshoe bats, civet, pig and mouse, which are 80.75%, 83.48%, 81.37%, 82.11% respectively (Table 2 ), while the residues 82 and 353 of mouse ACE2 are different from human ACE2 which are important residues for bind to spike [29].
T125 15770-15866 Sentence denotes But the homology of human ACE2 and pangolin ACE2, cat ACE2 are also high with 84.84% and 85.22%.
T126 15867-15939 Sentence denotes The homology of human ACE2 with other ACE2 varies from 59.73% to 83.23%.
T127 15940-15993 Sentence denotes In summary, 2019-nCoV may have extensive host ranges.
T128 15994-16002 Sentence denotes Fig. 2 .
T129 16003-16078 Sentence denotes Table 2 The amino acid sequence identities of ACE2 among different species.
T130 16079-16146 Sentence denotes Species Pairwise identities (%) of the amino acid sequences of ACE2
T131 16147-16362 Sentence denotes African green monkey Civet Bat (R. sinicus) Swine Malayan pangolin Mouse Cat Camel Goat Bos mutus Erinaceus europaeus Cavia porcellus Phascolarctos cinereus Sarcophilus harrisii Tiger Snake Parus major Gallus gallus
T132 16363-16470 Sentence denotes Human 93.93 83.48 80.75 81.37 84.84 82.11 85.22 83.23 81.61 81.24 79.01 77.29 71.17 70.51 59.73 67.08 65.31
T133 16471-16586 Sentence denotes African green monkey 81.78 79.93 79.93 83.77 81.78 83.15 81.91 81.41 80.92 77.94 76.85 70.38 69.84 59.21 65.6 64.13
T134 16587-16686 Sentence denotes Civet 81.78 81.49 82.73 85.59 81.61 93.29 83.85 81.86 81.74 79.75 75.55 71.66 71.63 59.6 67.44 66.3
T135 16687-16793 Sentence denotes Bat (R. sinicus) 79.93 81.49 80 82.86 78.26 83.73 81.37 80.37 80 78.51 74.56 69.68 70.02 58.61 65.11 65.19
T136 16794-16890 Sentence denotes Swine 79.93 82.73 80 82.61 80.62 83.98 89.81 87.7 87.58 77.64 75.3 71.17 71.01 61.09 66.95 65.56
T137 16891-17002 Sentence denotes Malayan pangolin 83.77 85.59 82.86 82.61 82.73 87.33 84.72 82.11 81.86 80.87 77.17 71.66 70.89 59.6 67.44 65.07
T138 17003-17103 Sentence denotes Mouse 81.78 81.61 78.26 80.62 82.73 81.74 80.99 80.12 80.37 78.63 78.16 71.05 71.13 61.21 67.2 66.17
T139 17104-17202 Sentence denotes Cat 83.15 93.29 83.73 83.98 87.33 81.74 85.71 83.23 83.11 81.49 76.42 72.65 72.25 59.6 67.81 66.79
T140 17203-17302 Sentence denotes Camel 81.91 83.85 81.37 89.81 84.72 80.99 85.71 88.2 88.57 79.25 77.29 71.79 72.12 61.34 67.2 66.42
T141 17303-17401 Sentence denotes Goat 81.41 81.86 80.37 87.7 82.11 80.12 83.23 88.2 97.76 78.14 76.54 72.04 71.38 60.84 66.09 65.44
T142 17402-17504 Sentence denotes Bos mutus 80.92 81.74 80 87.58 81.86 80.37 83.11 88.57 97.76 78.39 77.04 71.42 71.01 61.09 66.09 65.31
T143 17505-17619 Sentence denotes Erinaceus europaeus 77.94 79.75 78.51 77.64 80.87 78.63 81.49 79.25 78.14 78.39 74.56 70.67 69.65 60.59 68.8 66.42
T144 17620-17729 Sentence denotes Cavia porcellus 76.85 75.55 74.56 75.3 77.17 78.16 76.42 77.29 76.54 77.04 74.56 66.61 66.82 59.38 63.9 63.12
T145 17730-17847 Sentence denotes Phascolarctos cinereus 70.38 71.66 69.68 71.17 71.66 71.05 72.65 71.79 72.04 71.42 70.67 66.61 81.92 60.7 67.08 64.83
T146 17848-17963 Sentence denotes Sarcophilus harrisii 69.84 71.63 70.02 71.01 70.89 71.13 72.25 72.12 71.38 71.01 69.65 66.82 81.92 60.9 64.62 63.84
T147 17964-18065 Sentence denotes Tiger Snake 59.21 59.6 58.61 61.09 59.6 61.21 59.6 61.34 60.84 61.09 60.59 59.38 60.7 60.9 64.5 63.71
T148 18066-18166 Sentence denotes Parus major 65.6 67.44 65.11 66.95 67.44 67.2 67.81 67.2 66.09 66.09 68.8 63.9 67.08 64.62 64.5 82.2
T149 18167-18274 Sentence denotes Gallus gallus 64.13 66.3 65.19 65.56 65.07 66.17 66.79 66.42 65.44 65.31 66.42 63.12 64.83 63.84 63.71 82.2
T150 18275-18771 Sentence denotes Accession numbers: human (NP_068576.1), monkey (AY996037.1), civet (AAX63775.1), bat (R.sinicus) (AGZ48803.1), swine (NP_001116542.1), Malayan pangolin (XP_017505752.1), mouse (NP_001123985.1), cat (NP_001034545.1), camel (XP_010991717.1), goat (NP_001277036.1), Bos mutus (XP_005903173.1), Erinaceus europaeus (XP_007538670.1), Phascolarctos cinereus (XP_020863153.1), Sarcophilus harrisii (XP_031814825.1), tiger Snake (XP_026530754.1), Parus major (XP_015486815.1), Gallus gallus (QEQ50331.1).
T151 18772-18842 Sentence denotes Fig. 2 Phylogenetic analysis of ACE2 from humans and 18 other animals.
T152 18843-19020 Sentence denotes The tree was constructed based on the complete amino acid sequences of ACE2s derived from humans and other animals by using the neighbor-joining (NJ) method with 1000 bootstrap.
T153 19021-19071 Sentence denotes The accession numbers were as the same as Table 2.
T154 19072-19109 Sentence denotes Bootstrap values above 50 were shown.
T155 19111-19135 Sentence denotes 3.3 Origin of 2019-nCoV
T156 19136-19296 Sentence denotes The epidemiological investigation of early cases of 2019-nCoV pneumonia showed that many cases had been exposed to the Huanan Seafood Market in Wuhan [2,24,20].
T157 19297-19559 Sentence denotes In addition, 33 of the 585 environmental samples from Huanan Seafood Market were positive for 2019-nCoV; however, that market was trading a variety of live animals, such as hedgehog, badger, snake, and bird (turtledoves), probably pangolin, but not bats [24,30].
T158 19560-19693 Sentence denotes Thus, bats are less likely to have direct contact with human, and direct transmission of the virus from bat to human is unlikely [1].
T159 19694-19849 Sentence denotes Indeed, SARS-CoV and MERS-CoV originated from bats, the natural reservoir, but transmitted to humans via intermediate host civets and camels, respectively.
T160 19850-20004 Sentence denotes Therefore, 2019-nCoV may also originate from bat but was then transmitted to humans via an intermediate host in the market [[31], [32], [33], [34], [35]].
T161 20005-20191 Sentence denotes Currently, 2019-nCoV has been isolated from pangolins and it was found that the genomic seuqence of the isolated strain had 99% identity with that of currently 2019-nCoV infected humans.
T162 20192-20358 Sentence denotes It has been proposed that the transmission and evolution path of 2019-nCoV was from bat-CoV to pangolins (the intermediate hosts), from where it infected humans [36].
T163 20360-20386 Sentence denotes 4 Diagnosis and treatment
T164 20387-20546 Sentence denotes Diagnosis of coronaviruses is unnecessary in most cases of self-limited infection, as most of the patients have mild or moderate syndromes with good prognosis.
T165 20547-20678 Sentence denotes However, it may be essential to identify an etiological agent in epidemiological studies, especially during the epidemics outbreak.
T166 20679-20787 Sentence denotes Since 2019-nCoV has not been found before in humans, there is no vaccine or special treatment for it so far.
T167 20788-20878 Sentence denotes The number of cases is increasing rapidly, even under the current public health emergency.
T168 20879-21018 Sentence denotes Thus, diagnosing all suspected cases as soon as possible and immediately isolating them is critical to cutting off the source of infection.
T169 21019-21175 Sentence denotes Conventional diagnostic testing methods, such as the assays for detection of antiviral antibodies or viral antigens have been developed and used clinically.
T170 21176-21368 Sentence denotes New diagnostic strategies including multiplex nucleic acid amplification and microarray-based assays may help in epidemiologic monitoring, along with taking effective prevention steps [37,38].
T171 21369-21519 Sentence denotes 2019-nCoV nucleic acids can be detected in specimens including nasopharyngeal swabs, sputum, lower respiratory tract secretions, blood and stool [20].
T172 21520-21618 Sentence denotes There are currently no approved antiviral treatments or vaccines for human coronavirus infections.
T173 21619-21794 Sentence denotes The development of safe, stable vaccines is a huge challenge and vaccines would ideally be broad-spectrum, so the research and development of new drugs is a very long process.
T174 21795-21911 Sentence denotes In such a sudden epidemic, scientists were not able to carry out new drug development by the traditional principles.
T175 21912-22061 Sentence denotes Therefore, there is another option: a systematic and large-scale screening of existing drugs to see whether they have activity against the 2019-nCoV.
T176 22062-22159 Sentence denotes Recently drug screening found that nelfinavir has potential antiviral activity against 2019-nCoV.
T177 22160-22275 Sentence denotes In addition, pitavastatin, perampanel, and praziquantel might also have moderate activities against 2019-nCoV [39].
T178 22276-22442 Sentence denotes Based on previous studies, an anti-HIV drug named Kaletra may have therapeutic effect on SARS and MERS, which is composed of two protease inhibitors, ritonavir (CAS#:
T179 22443-22477 Sentence denotes 155,213-67-5) and lopinavir (CAS#:
T180 22478-22523 Sentence denotes 192,725-17-0) [[40], [41], [42], [43], [44]].
T181 22524-22661 Sentence denotes More recently, Kaletra was also recommended to treat Wuhan pneumonia by the National Health Commission of the People’s Republic of China.
T182 22662-22845 Sentence denotes Patients with SARS or MERS have used several drugs including ribavirin, interferon, lopinavir-ritonavir, and corticosteroids, but the efficacy of certain drugs is still controversial.
T183 22846-23172 Sentence denotes Other antiviral drugs, like FAD-approved drugs including ribavirin, penciclovir, nitrazine, nalfamusta, chloroquine, and the two broad-spectrum antiviral drugs redexivir (GS-5734) and favivir (T-705), are being evaluated by measuring the effects of these compounds on cytotoxicity, virus yield and infection rate of 2019-nCoV.
T184 23173-23352 Sentence denotes Recent results showed that remdesivir and chloroquine are effective in controlling 2019-nCoV infection in vitro and may be evaluated in human patients with 2019-nCoV disease [45].
T185 23353-23545 Sentence denotes Remdesivir has recently been recognized as a promising antiviral drug against multiple RNA viruses (including SARS/MERS-CoV) in cultured cells, and in mouse and non-human primate (NHP) models.
T186 23546-23634 Sentence denotes Currently remdesivir for the treatment of Ebola virus infection is in clinical research.
T187 23635-23703 Sentence denotes It is promising that these compounds can treat 2019-nCoV infections.
T188 23704-23871 Sentence denotes Moreover, the fifth edition of infection prevention and control (IPC) guidance announced that severe and critically ill patients could be treated with recovery plasma.
T189 23873-23911 Sentence denotes 5 Conclusions and future perspectives
T190 23912-23945 Sentence denotes The 2019-nCoV epidemic continues.
T191 23946-24116 Sentence denotes During the past month, huge progress has been made in pathogen monitoring, identifying sources, basic etiology, clinical treatment, drug testing, and vaccine development.
T192 24117-24234 Sentence denotes With the efforts of China and the helps of other countries in the world, we hope that the epidemic will subside soon.
T193 24235-24395 Sentence denotes Future research on viral replication, pathogenesis, antiviral drugs and other aspects of 2019-nCoV will contribute to the treatment and prevention of the virus.
T194 24396-24605 Sentence denotes However, given the emergence of 2019-nCoV pneumonia as a new infectious disease with interspecies transmission from animals, we should reflect on the origin of the human pathogen and learn from our experience.
T195 24606-24887 Sentence denotes With changes of ecology and human activities, including unlimited invasion of natural habitats of animals, consumption of some of these animals, and modern agricultural practices, the spillover of viruses from natural hosts to humans continues to appear and may even be escalating.
T196 24888-25059 Sentence denotes Although we have built an unparalleled human civilization and a highly developed information society, invisible viruses can still have devastating effects on human beings.
T197 25060-25194 Sentence denotes The high lethality viruses such as SARS-CoV, MERS-CoV, H5N1, H7N9, Ebola and emerging 2019-nCoV should serve as an alarm to the world.
T198 25195-25267 Sentence denotes We should strive to reduce the probability of their occurrence and harm.
T199 25268-25554 Sentence denotes Strengthening the investigation of animal etiology, normalizing the storage of high risk pathogens, reducing direct contact with wildlife, maintaining the barriers between natural reservoirs and human society and completely eradicating wildlife trading will help to achieve these goals.
T200 25556-25589 Sentence denotes Declaration of Competing Interest
T201 25590-25649 Sentence denotes The authors declare that they have no conflict of interest.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T3 54-63 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T4 852-862 Phenotype denotes pneumonias http://purl.obolibrary.org/obo/HP_0002090
T5 933-942 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T6 976-985 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T7 1568-1577 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T8 2918-2927 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T9 3768-3777 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T10 3902-3911 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T11 4067-4076 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T12 6324-6333 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T13 7588-7593 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T14 8236-8267 Phenotype denotes central nervous system diseases http://purl.obolibrary.org/obo/HP_0002011
T15 8649-8666 Phenotype denotes severe infections http://purl.obolibrary.org/obo/HP_0032169
T16 9927-9932 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T17 9934-9943 Phenotype denotes dry cough http://purl.obolibrary.org/obo/HP_0031246
T18 9945-9952 Phenotype denotes dyspnea http://purl.obolibrary.org/obo/HP_0002094
T19 10148-10159 Phenotype denotes sore throat http://purl.obolibrary.org/obo/HP_0033050
T20 10340-10348 Phenotype denotes diarrhea http://purl.obolibrary.org/obo/HP_0002014
T21 10455-10475 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T22 10493-10498 Phenotype denotes shock http://purl.obolibrary.org/obo/HP_0031273
T23 10500-10518 Phenotype denotes metabolic acidosis http://purl.obolibrary.org/obo/HP_0001942
T24 10646-10651 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T25 10707-10712 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T26 19198-19207 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T27 22583-22592 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T28 24438-24447 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

2_test

Id Subject Object Predicate Lexical cue
32087334-31978945-69694984 1644-1645 31978945 denotes 2
32087334-31986261-69694985 2098-2099 31986261 denotes 4
32087334-31986257-69694986 2209-2210 31986257 denotes 5
32087334-16647974-69694987 3589-3590 16647974 denotes 7
32087334-31949058-69694988 3599-3600 31949058 denotes 9
32087334-31986257-69694989 7011-7012 31986257 denotes 5
32087334-30531947-69694990 8373-8374 30531947 denotes 1
32087334-24217413-69694991 8375-8377 24217413 denotes 11
32087334-27012512-69694992 8701-8703 27012512 denotes 12
32087334-27743750-69694993 8704-8706 27743750 denotes 13
32087334-30531947-69694994 9138-9139 30531947 denotes 1
32087334-12766207-69694995 9590-9592 12766207 denotes 14
32087334-15353409-69694996 9596-9598 15353409 denotes 15
32087334-29846148-69694997 9602-9604 29846148 denotes 16
32087334-31986261-69694998 10010-10011 31986261 denotes 4
32087334-31986264-69694999 10012-10014 31986264 denotes 17
32087334-32007143-69695000 10015-10017 32007143 denotes 18
32087334-31986261-69695001 10235-10236 31986261 denotes 4
32087334-31986264-69695002 10237-10239 31986264 denotes 17
32087334-31986264-69695003 10386-10388 31986264 denotes 17
32087334-31978945-69695004 10827-10828 31978945 denotes 2
32087334-31986264-69695005 10829-10831 31986264 denotes 17
32087334-31978945-69695006 11651-11652 31978945 denotes 2
32087334-31986261-69695007 11653-11654 31986261 denotes 4
32087334-31986264-69695008 11655-11657 31986264 denotes 17
32087334-31986257-69695009 12162-12163 31986257 denotes 5
32087334-31978945-69695010 19287-19288 31978945 denotes 2
32087334-30531947-69695011 19690-19691 30531947 denotes 1
32087334-23075143-69695012 19975-19977 23075143 denotes 31
32087334-12958366-69695013 19981-19983 12958366 denotes 32
32087334-24172901-69695014 19987-19989 24172901 denotes 33
32087334-24896817-69695015 19993-19995 24896817 denotes 34
32087334-24675934-69695016 19999-20001 24675934 denotes 35
32087334-15030703-69695017 21361-21363 15030703 denotes 37
32087334-20554810-69695018 21364-21366 20554810 denotes 38
32087334-17597972-69695019 22494-22496 17597972 denotes 40
32087334-14985565-69695020 22500-22502 14985565 denotes 41
32087334-18706430-69695021 22506-22508 18706430 denotes 42
32087334-26483999-69695022 22512-22514 26483999 denotes 43
32087334-29382391-69695023 22518-22520 29382391 denotes 44