PMC:7077337 / 24326-25357 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7077337","sourcedb":"PMC","sourceid":"7077337","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7077337","text":"Middle East respiratory syndrome (MERS) was first reported in September 2012 in Saudi Arabia, following isolation of MERS-CoV from a male patient who died months earlier from severe pneumonia and multiple organ failure [1]. In the 8 years since then, there have been more than 2494 confirmed cases of MERS resulting in upwards of 858 deaths globally [46]. While 27 countries have reported cases of MERS, approximately 80% of confirmed cases originated in Saudi Arabia [47]. To date, all known cases of MERS can be linked to travel or residence in countries along the Arabian Peninsula—that is, Bahrain; Iraq; Iran; Israel, the West Bank, and Gaza; Jordan; Kuwait; Lebanon; Oman; Qatar, Saudi Arabia; Syria; the United Arab Emirates (UAE); and Yemen [48]. The largest documented outbreak outside of this region occurred in 2015 in the Republic of Korea, in which 186 infections occurred, resulting in 38 deaths [49]. The index case in this outbreak reportedly returned from the Arabian Peninsula just prior to onset of illness [50].","tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"712","span":{"begin":632,"end":636},"obj":"Gene"},{"id":"713","span":{"begin":117,"end":125},"obj":"Species"},{"id":"714","span":{"begin":138,"end":145},"obj":"Species"},{"id":"715","span":{"begin":12,"end":23},"obj":"Species"},{"id":"716","span":{"begin":150,"end":154},"obj":"Disease"},{"id":"717","span":{"begin":182,"end":191},"obj":"Disease"},{"id":"718","span":{"begin":196,"end":218},"obj":"Disease"},{"id":"719","span":{"begin":334,"end":340},"obj":"Disease"},{"id":"720","span":{"begin":866,"end":876},"obj":"Disease"},{"id":"721","span":{"begin":903,"end":909},"obj":"Disease"}],"attributes":[{"id":"A712","pred":"tao:has_database_id","subj":"712","obj":"Gene:55024"},{"id":"A713","pred":"tao:has_database_id","subj":"713","obj":"Tax:1335626"},{"id":"A714","pred":"tao:has_database_id","subj":"714","obj":"Tax:9606"},{"id":"A715","pred":"tao:has_database_id","subj":"715","obj":"Tax:12814"},{"id":"A716","pred":"tao:has_database_id","subj":"716","obj":"MESH:D003643"},{"id":"A717","pred":"tao:has_database_id","subj":"717","obj":"MESH:D011014"},{"id":"A718","pred":"tao:has_database_id","subj":"718","obj":"MESH:D009102"},{"id":"A719","pred":"tao:has_database_id","subj":"719","obj":"MESH:D003643"},{"id":"A720","pred":"tao:has_database_id","subj":"720","obj":"MESH:D007239"},{"id":"A721","pred":"tao:has_database_id","subj":"721","obj":"MESH:D003643"},{"subj":"712","pred":"source","obj":"LitCovid-PubTator"},{"subj":"713","pred":"source","obj":"LitCovid-PubTator"},{"subj":"714","pred":"source","obj":"LitCovid-PubTator"},{"subj":"715","pred":"source","obj":"LitCovid-PubTator"},{"subj":"716","pred":"source","obj":"LitCovid-PubTator"},{"subj":"717","pred":"source","obj":"LitCovid-PubTator"},{"subj":"718","pred":"source","obj":"LitCovid-PubTator"},{"subj":"719","pred":"source","obj":"LitCovid-PubTator"},{"subj":"720","pred":"source","obj":"LitCovid-PubTator"},{"subj":"721","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T66","span":{"begin":205,"end":210},"obj":"Body_part"}],"attributes":[{"id":"A66","pred":"fma_id","subj":"T66","obj":"http://purl.org/sig/ont/fma/fma67498"},{"subj":"T66","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T54","span":{"begin":205,"end":210},"obj":"Body_part"}],"attributes":[{"id":"A54","pred":"uberon_id","subj":"T54","obj":"http://purl.obolibrary.org/obo/UBERON_0000062"},{"subj":"T54","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T207","span":{"begin":182,"end":191},"obj":"Disease"},{"id":"T208","span":{"begin":196,"end":218},"obj":"Disease"},{"id":"T209","span":{"begin":866,"end":876},"obj":"Disease"}],"attributes":[{"id":"A207","pred":"mondo_id","subj":"T207","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A208","pred":"mondo_id","subj":"T208","obj":"http://purl.obolibrary.org/obo/MONDO_0043726"},{"id":"A209","pred":"mondo_id","subj":"T209","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"subj":"T207","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T208","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T209","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T173","span":{"begin":131,"end":132},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T174","span":{"begin":133,"end":137},"obj":"http://purl.obolibrary.org/obo/UBERON_0003101"},{"id":"T175","span":{"begin":133,"end":137},"obj":"http://www.ebi.ac.uk/efo/EFO_0000970"},{"id":"T176","span":{"begin":205,"end":210},"obj":"http://purl.obolibrary.org/obo/UBERON_0003103"},{"id":"T177","span":{"begin":362,"end":364},"obj":"http://purl.obolibrary.org/obo/CLO_0050509"},{"id":"T178","span":{"begin":750,"end":752},"obj":"http://purl.obolibrary.org/obo/CLO_0001382"}],"attributes":[{"subj":"T173","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T174","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T175","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T176","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T177","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T178","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T8","span":{"begin":133,"end":137},"obj":"Chemical"}],"attributes":[{"id":"A8","pred":"chebi_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/CHEBI_30780"},{"subj":"T8","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T67","span":{"begin":182,"end":191},"obj":"Phenotype"}],"attributes":[{"id":"A67","pred":"hp_id","subj":"T67","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"subj":"T67","pred":"source","obj":"LitCovid-PD-HP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T161","span":{"begin":0,"end":223},"obj":"Sentence"},{"id":"T162","span":{"begin":224,"end":355},"obj":"Sentence"},{"id":"T163","span":{"begin":356,"end":473},"obj":"Sentence"},{"id":"T164","span":{"begin":474,"end":754},"obj":"Sentence"},{"id":"T165","span":{"begin":755,"end":915},"obj":"Sentence"},{"id":"T166","span":{"begin":916,"end":1031},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T161","pred":"source","obj":"LitCovid-sentences"},{"subj":"T162","pred":"source","obj":"LitCovid-sentences"},{"subj":"T163","pred":"source","obj":"LitCovid-sentences"},{"subj":"T164","pred":"source","obj":"LitCovid-sentences"},{"subj":"T165","pred":"source","obj":"LitCovid-sentences"},{"subj":"T166","pred":"source","obj":"LitCovid-sentences"}]},{"project":"2_test","denotations":[{"id":"32050635-28159163-144359564","span":{"begin":220,"end":221},"obj":"28159163"},{"id":"32050635-27358348-144359565","span":{"begin":469,"end":471},"obj":"27358348"},{"id":"32050635-28875620-144359566","span":{"begin":911,"end":913},"obj":"28875620"}],"attributes":[{"subj":"32050635-28159163-144359564","pred":"source","obj":"2_test"},{"subj":"32050635-27358348-144359565","pred":"source","obj":"2_test"},{"subj":"32050635-28875620-144359566","pred":"source","obj":"2_test"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PubTator","color":"#ecba93","default":true},{"id":"LitCovid-PD-FMA-UBERON","color":"#a093ec"},{"id":"LitCovid-PD-UBERON","color":"#9fec93"},{"id":"LitCovid-PD-MONDO","color":"#ec93b9"},{"id":"LitCovid-PD-CLO","color":"#93d3ec"},{"id":"LitCovid-PD-CHEBI","color":"#ecea93"},{"id":"LitCovid-PD-HP","color":"#d093ec"},{"id":"LitCovid-sentences","color":"#93ecb6"},{"id":"2_test","color":"#ec9c93"}]}]}}