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PMC:7077337 / 24326-25357 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
712 632-636 Gene denotes Bank Gene:55024
713 117-125 Species denotes MERS-CoV Tax:1335626
714 138-145 Species denotes patient Tax:9606
715 12-23 Species denotes respiratory Tax:12814
716 150-154 Disease denotes died MESH:D003643
717 182-191 Disease denotes pneumonia MESH:D011014
718 196-218 Disease denotes multiple organ failure MESH:D009102
719 334-340 Disease denotes deaths MESH:D003643
720 866-876 Disease denotes infections MESH:D007239
721 903-909 Disease denotes deaths MESH:D003643

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T66 205-210 Body_part denotes organ http://purl.org/sig/ont/fma/fma67498

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T54 205-210 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T207 182-191 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T208 196-218 Disease denotes multiple organ failure http://purl.obolibrary.org/obo/MONDO_0043726
T209 866-876 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T173 131-132 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T174 133-137 http://purl.obolibrary.org/obo/UBERON_0003101 denotes male
T175 133-137 http://www.ebi.ac.uk/efo/EFO_0000970 denotes male
T176 205-210 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T177 362-364 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T178 750-752 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T8 133-137 Chemical denotes male http://purl.obolibrary.org/obo/CHEBI_30780

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T67 182-191 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T161 0-223 Sentence denotes Middle East respiratory syndrome (MERS) was first reported in September 2012 in Saudi Arabia, following isolation of MERS-CoV from a male patient who died months earlier from severe pneumonia and multiple organ failure [1].
T162 224-355 Sentence denotes In the 8 years since then, there have been more than 2494 confirmed cases of MERS resulting in upwards of 858 deaths globally [46].
T163 356-473 Sentence denotes While 27 countries have reported cases of MERS, approximately 80% of confirmed cases originated in Saudi Arabia [47].
T164 474-754 Sentence denotes To date, all known cases of MERS can be linked to travel or residence in countries along the Arabian Peninsula—that is, Bahrain; Iraq; Iran; Israel, the West Bank, and Gaza; Jordan; Kuwait; Lebanon; Oman; Qatar, Saudi Arabia; Syria; the United Arab Emirates (UAE); and Yemen [48].
T165 755-915 Sentence denotes The largest documented outbreak outside of this region occurred in 2015 in the Republic of Korea, in which 186 infections occurred, resulting in 38 deaths [49].
T166 916-1031 Sentence denotes The index case in this outbreak reportedly returned from the Arabian Peninsula just prior to onset of illness [50].

2_test

Id Subject Object Predicate Lexical cue
32050635-28159163-144359564 220-221 28159163 denotes 1
32050635-27358348-144359565 469-471 27358348 denotes 47
32050635-28875620-144359566 911-913 28875620 denotes 49