PMC:7075884 / 8856-11976
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 394 | 2568-2572 | Gene | denotes | US11 | Gene:2703439 |
| 395 | 2577-2584 | Gene | denotes | β-Actin | Gene:728378 |
| 396 | 2910-2914 | Gene | denotes | US11 | Gene:2703439 |
| 397 | 2919-2926 | Gene | denotes | β-Actin | Gene:728378 |
| 398 | 2169-2178 | Gene | denotes | Lanes 4–6 | |
| 399 | 2141-2150 | Gene | denotes | Lanes 1–3 | |
| 400 | 2087-2092 | Species | denotes | HSV-1 | Tax:10298 |
| 401 | 2704-2709 | Species | denotes | HSV-1 | Tax:10298 |
| 402 | 3103-3108 | Species | denotes | HSV-1 | Tax:10298 |
| 403 | 3059-3062 | Gene | denotes | C15 | Gene:51316 |
| 404 | 2638-2641 | Gene | denotes | C15 | Gene:51316 |
| 405 | 2042-2044 | Chemical | denotes | GA | MESH:C112485 |
| 406 | 2137-2139 | Chemical | denotes | GA | MESH:C112485 |
| 407 | 2194-2198 | Chemical | denotes | DMEM | |
| 408 | 2314-2316 | Chemical | denotes | GA | MESH:C112485 |
| 409 | 2054-2069 | Disease | denotes | HSV-1 infection | MESH:C536395 |
| 410 | 2369-2377 | Disease | denotes | infected | MESH:D007239 |
| 411 | 2690-2698 | Disease | denotes | infected | MESH:D007239 |
| 412 | 3085-3093 | Disease | denotes | infected | MESH:D007239 |
| 413 | 2228-2232 | CellLine | denotes | HEp2 | CVCL:1906 |
| 414 | 2236-2240 | CellLine | denotes | 293T | CVCL:0063 |
| 415 | 2337-2342 | CellLine | denotes | HEp-2 | CVCL:1906 |
| 416 | 2350-2354 | CellLine | denotes | 293T | CVCL:0063 |
| 417 | 2590-2594 | CellLine | denotes | HEp2 | CVCL:1906 |
| 454 | 815-819 | Gene | denotes | US11 | Gene:2703439 |
| 455 | 1426-1430 | Gene | denotes | US11 | Gene:2703439 |
| 456 | 1297-1300 | Gene | denotes | C15 | Gene:51316 |
| 457 | 16-21 | Species | denotes | HSV-1 | Tax:10298 |
| 458 | 73-77 | Species | denotes | ZIKV | Tax:64320 |
| 459 | 170-175 | Species | denotes | HSV-1 | Tax:10298 |
| 460 | 205-210 | Species | denotes | HSV-1 | Tax:10298 |
| 461 | 347-352 | Species | denotes | HSV-1 | Tax:10298 |
| 462 | 760-765 | Species | denotes | HSV-1 | Tax:10298 |
| 463 | 911-916 | Species | denotes | HSV-1 | Tax:10298 |
| 464 | 1101-1106 | Species | denotes | HSV-1 | Tax:10298 |
| 465 | 1133-1138 | Species | denotes | HSV-1 | Tax:10298 |
| 466 | 1187-1192 | Species | denotes | HSV-1 | Tax:10298 |
| 467 | 1366-1371 | Species | denotes | HSV-1 | Tax:10298 |
| 468 | 1403-1408 | Species | denotes | HSV-1 | Tax:10298 |
| 469 | 1617-1622 | Species | denotes | HSV-1 | Tax:10298 |
| 470 | 1811-1816 | Species | denotes | HSV-1 | Tax:10298 |
| 471 | 162-166 | Species | denotes | HCMV | Tax:10359 |
| 472 | 193-195 | Chemical | denotes | GA | MESH:C112485 |
| 473 | 267-269 | Chemical | denotes | GA | MESH:C112485 |
| 474 | 390-392 | Chemical | denotes | GA | MESH:C112485 |
| 475 | 431-435 | Chemical | denotes | DMEM | |
| 476 | 567-569 | Chemical | denotes | GA | MESH:C112485 |
| 477 | 679-681 | Chemical | denotes | GA | MESH:C112485 |
| 478 | 1181-1183 | Chemical | denotes | GA | MESH:C112485 |
| 479 | 1328-1339 | Chemical | denotes | 199V medium | |
| 480 | 2009-2011 | Chemical | denotes | GA | MESH:C112485 |
| 481 | 706-721 | Disease | denotes | viral infection | MESH:D001102 |
| 482 | 1828-1836 | Disease | denotes | infected | MESH:D007239 |
| 483 | 313-318 | CellLine | denotes | HEp-2 | CVCL:1906 |
| 484 | 323-327 | CellLine | denotes | 293T | CVCL:0063 |
| 485 | 479-483 | CellLine | denotes | HEp2 | CVCL:1906 |
| 486 | 487-491 | CellLine | denotes | 293T | CVCL:0063 |
| 487 | 725-729 | CellLine | denotes | HEp2 | CVCL:1906 |
| 488 | 734-738 | CellLine | denotes | 293T | CVCL:0063 |
| 489 | 1206-1210 | CellLine | denotes | HEp2 | CVCL:1906 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T50 | 55-58 | Body_part | denotes | DNA | http://purl.org/sig/ont/fma/fma74412 |
| T51 | 82-85 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T52 | 110-122 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
| T53 | 328-333 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T54 | 420-425 | Body_part | denotes | serum | http://purl.org/sig/ont/fma/fma63083 |
| T55 | 492-497 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T56 | 739-744 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T57 | 821-829 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T58 | 1001-1008 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T59 | 1139-1146 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T60 | 1211-1215 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T61 | 1385-1392 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T62 | 1431-1439 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T63 | 1562-1570 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T64 | 1623-1631 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T65 | 1733-1737 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T66 | 1842-1847 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T67 | 2020-2024 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T68 | 2183-2188 | Body_part | denotes | serum | http://purl.org/sig/ont/fma/fma63083 |
| T69 | 2241-2246 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T70 | 2423-2428 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T71 | 2472-2476 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T72 | 2579-2584 | Body_part | denotes | Actin | http://purl.org/sig/ont/fma/fma67843 |
| T73 | 2595-2599 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T74 | 2765-2770 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T75 | 2814-2818 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T76 | 2921-2926 | Body_part | denotes | Actin | http://purl.org/sig/ont/fma/fma67843 |
| T77 | 2949-2956 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T78 | 3028-3033 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T4 | 420-425 | Body_part | denotes | serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
| T5 | 2183-2188 | Body_part | denotes | serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T43 | 706-721 | Disease | denotes | viral infection | http://purl.obolibrary.org/obo/MONDO_0005108 |
| T44 | 712-721 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T45 | 2060-2069 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T119 | 3-9 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
| T120 | 23-24 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T121 | 59-64 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T122 | 86-91 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T123 | 98-101 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T124 | 180-184 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T125 | 241-245 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T126 | 277-282 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T127 | 313-318 | http://purl.obolibrary.org/obo/CLO_0003707 | denotes | HEp-2 |
| T128 | 313-318 | http://purl.obolibrary.org/obo/CLO_0050927 | denotes | HEp-2 |
| T129 | 323-327 | http://purl.obolibrary.org/obo/CLO_0050894 | denotes | 293T |
| T130 | 323-327 | http://purl.obolibrary.org/obo/CLO_0051650 | denotes | 293T |
| T131 | 323-327 | http://purl.obolibrary.org/obo/CLO_0052052 | denotes | 293T |
| T132 | 328-333 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T133 | 479-483 | http://purl.obolibrary.org/obo/CLO_0003707 | denotes | HEp2 |
| T134 | 479-483 | http://purl.obolibrary.org/obo/CLO_0050927 | denotes | HEp2 |
| T135 | 487-491 | http://purl.obolibrary.org/obo/CLO_0050894 | denotes | 293T |
| T136 | 487-491 | http://purl.obolibrary.org/obo/CLO_0051650 | denotes | 293T |
| T137 | 487-491 | http://purl.obolibrary.org/obo/CLO_0052052 | denotes | 293T |
| T138 | 492-497 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T139 | 535-536 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T140 | 574-575 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T141 | 589-594 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T142 | 686-690 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T143 | 725-729 | http://purl.obolibrary.org/obo/CLO_0003707 | denotes | HEp2 |
| T144 | 725-729 | http://purl.obolibrary.org/obo/CLO_0050927 | denotes | HEp2 |
| T145 | 734-738 | http://purl.obolibrary.org/obo/CLO_0050894 | denotes | 293T |
| T146 | 734-738 | http://purl.obolibrary.org/obo/CLO_0051650 | denotes | 293T |
| T147 | 734-738 | http://purl.obolibrary.org/obo/CLO_0052052 | denotes | 293T |
| T148 | 739-744 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T149 | 865-867 | http://purl.obolibrary.org/obo/CLO_0001236 | denotes | 2A |
| T150 | 868-869 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T151 | 1057-1058 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T152 | 1162-1166 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T153 | 1206-1215 | http://purl.obolibrary.org/obo/CLO_0003707 | denotes | HEp2 cell |
| T154 | 1259-1262 | http://purl.obolibrary.org/obo/CLO_0001602 | denotes | a 6 |
| T155 | 1259-1262 | http://purl.obolibrary.org/obo/CLO_0001603 | denotes | a 6 |
| T156 | 1259-1262 | http://purl.obolibrary.org/obo/CLO_0050248 | denotes | a 6 |
| T157 | 1259-1262 | http://purl.obolibrary.org/obo/CLO_0052463 | denotes | a 6 |
| T158 | 1733-1737 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T159 | 1807-1810 | http://purl.obolibrary.org/obo/CLO_0053478 | denotes | GFP |
| T160 | 1837-1841 | http://purl.obolibrary.org/obo/CLO_0009524 | denotes | Vero |
| T161 | 1837-1841 | http://purl.obolibrary.org/obo/CLO_0050515 | denotes | Vero |
| T162 | 1842-1847 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T163 | 1956-1957 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T164 | 2020-2024 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T165 | 2072-2073 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T166 | 2228-2232 | http://purl.obolibrary.org/obo/CLO_0003707 | denotes | HEp2 |
| T167 | 2228-2232 | http://purl.obolibrary.org/obo/CLO_0050927 | denotes | HEp2 |
| T168 | 2236-2240 | http://purl.obolibrary.org/obo/CLO_0050894 | denotes | 293T |
| T169 | 2236-2240 | http://purl.obolibrary.org/obo/CLO_0051650 | denotes | 293T |
| T170 | 2236-2240 | http://purl.obolibrary.org/obo/CLO_0052052 | denotes | 293T |
| T171 | 2241-2246 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T172 | 2337-2342 | http://purl.obolibrary.org/obo/CLO_0003707 | denotes | HEp-2 |
| T173 | 2337-2342 | http://purl.obolibrary.org/obo/CLO_0050927 | denotes | HEp-2 |
| T174 | 2344-2345 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T175 | 2350-2354 | http://purl.obolibrary.org/obo/CLO_0050894 | denotes | 293T |
| T176 | 2350-2354 | http://purl.obolibrary.org/obo/CLO_0051650 | denotes | 293T |
| T177 | 2350-2354 | http://purl.obolibrary.org/obo/CLO_0052052 | denotes | 293T |
| T178 | 2356-2357 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T179 | 2423-2428 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T180 | 2448-2449 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T181 | 2472-2476 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T182 | 2590-2599 | http://purl.obolibrary.org/obo/CLO_0003707 | denotes | HEp2 cell |
| T183 | 2722-2726 | http://purl.obolibrary.org/obo/CLO_0001382 | denotes | 4, 8 |
| T184 | 2765-2770 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T185 | 2790-2791 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T186 | 2814-2818 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T187 | 3023-3027 | http://purl.obolibrary.org/obo/CLO_0009524 | denotes | Vero |
| T188 | 3023-3027 | http://purl.obolibrary.org/obo/CLO_0050515 | denotes | Vero |
| T189 | 3028-3033 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T190 | 3099-3102 | http://purl.obolibrary.org/obo/CLO_0053478 | denotes | GFP |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T206 | 10-12 | Chemical | denotes | GA | http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354 |
| T209 | 55-58 | Chemical | denotes | DNA | http://purl.obolibrary.org/obo/CHEBI_16991 |
| T210 | 110-122 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T211 | 193-195 | Chemical | denotes | GA | http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354 |
| T214 | 267-269 | Chemical | denotes | GA | http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354 |
| T217 | 390-392 | Chemical | denotes | GA | http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354 |
| T220 | 567-569 | Chemical | denotes | GA | http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354 |
| T223 | 679-681 | Chemical | denotes | GA | http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354 |
| T226 | 821-829 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T227 | 1001-1008 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T228 | 1069-1071 | Chemical | denotes | GA | http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354 |
| T231 | 1112-1114 | Chemical | denotes | GA | http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354 |
| T234 | 1139-1146 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T235 | 1181-1183 | Chemical | denotes | GA | http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354 |
| T238 | 1294-1296 | Chemical | denotes | GA | http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354 |
| T241 | 1297-1302 | Chemical | denotes | C15:1 | http://purl.obolibrary.org/obo/CHEBI_75088 |
| T242 | 1297-1300 | Chemical | denotes | C15 | http://purl.obolibrary.org/obo/CHEBI_42504 |
| T243 | 1385-1392 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T244 | 1431-1439 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T245 | 1562-1570 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T246 | 1623-1631 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T247 | 1765-1767 | Chemical | denotes | GA | http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354 |
| T250 | 2009-2011 | Chemical | denotes | GA | http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354 |
| T253 | 2042-2044 | Chemical | denotes | GA | http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354 |
| T256 | 2137-2139 | Chemical | denotes | GA | http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354 |
| T259 | 2314-2316 | Chemical | denotes | GA | http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354 |
| T262 | 2635-2637 | Chemical | denotes | GA | http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354 |
| T265 | 2638-2643 | Chemical | denotes | C15:1 | http://purl.obolibrary.org/obo/CHEBI_75088 |
| T266 | 2638-2641 | Chemical | denotes | C15 | http://purl.obolibrary.org/obo/CHEBI_42504 |
| T267 | 2949-2956 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T268 | 3056-3058 | Chemical | denotes | GA | http://purl.obolibrary.org/obo/CHEBI_5206|http://purl.obolibrary.org/obo/CHEBI_73855|http://purl.obolibrary.org/obo/CHEBI_5354 |
| T271 | 3059-3064 | Chemical | denotes | C15:1 | http://purl.obolibrary.org/obo/CHEBI_75088 |
| T272 | 3059-3062 | Chemical | denotes | C15 | http://purl.obolibrary.org/obo/CHEBI_42504 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26 | 706-721 | http://purl.obolibrary.org/obo/GO_0016032 | denotes | viral infection |
| T27 | 944-975 | http://purl.obolibrary.org/obo/GO_1903901 | denotes | inhibition of viral replication |
| T28 | 958-975 | http://purl.obolibrary.org/obo/GO_0019079 | denotes | viral replication |
| T29 | 958-975 | http://purl.obolibrary.org/obo/GO_0019058 | denotes | viral replication |
| T30 | 1001-1018 | http://purl.obolibrary.org/obo/GO_0006412 | denotes | protein synthesis |
| T31 | 1009-1018 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | synthesis |
| T32 | 1645-1676 | http://purl.obolibrary.org/obo/GO_1903901 | denotes | inhibition of viral replication |
| T33 | 1659-1676 | http://purl.obolibrary.org/obo/GO_0019079 | denotes | viral replication |
| T34 | 1659-1676 | http://purl.obolibrary.org/obo/GO_0019058 | denotes | viral replication |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T62 | 0-176 | Sentence | denotes | We tested GA on HSV-1, a rapidly replicating and lytic DNA virus, and on ZIKV, an RNA virus which has neither glycoprotein conservation nor common receptors with HCMV or HSV-1. |
| T63 | 177-283 | Sentence | denotes | To test whether GA inhibits HSV-1, we designed an experiment to test the direct effect of GA on the virus. |
| T64 | 284-334 | Sentence | denotes | For this experiment, we used HEp-2 and 293T cells. |
| T65 | 335-570 | Sentence | denotes | 1 × 107 PFU HSV-1 strain F was treated for 1 hour with GA (50 µM) or with vehicle in serum free DMEM and then each of these were used to infect HEp2 or 293T cells at an MOI of 0.5 in 199V medium with a final concentration of 2.5 µM GA. |
| T66 | 571-682 | Sentence | denotes | As a control, the virus that was originally treated with the vehicle was then supplemented also with 2.5 µM GA. |
| T67 | 683-871 | Sentence | denotes | To test for successful viral infection of HEp2 and 293T cells, production of HSV-1 immediate early (ICP27), early (ICP8), and late (US11) proteins was analyzed by Western Blot (Fig. 2A,B). |
| T68 | 872-1019 | Sentence | denotes | The results showed that in the treated HSV-1 F stock there was complete inhibition of viral replication, as indicated by lack of protein synthesis. |
| T69 | 1020-1158 | Sentence | denotes | This implies that viral entry may be a target of GA, because direct treatment of HSV-1 with GA blocks downstream HSV-1 protein production. |
| T70 | 1159-1402 | Sentence | denotes | To test the effect of GA on HSV-1 replication, HEp2 cell monolayers were grown to 90% confluency in a 6-well plate, treated with 10 µM GA C15:1 or vehicle for 1 hour in 199V medium, and then inoculated with HSV-1 strain F for protein analysis. |
| T71 | 1403-1480 | Sentence | denotes | HSV-1 ICP27, ICP8, and US11 proteins were detected by Western Blot (Fig. 2C). |
| T72 | 1481-1571 | Sentence | denotes | The results showed profound inhibition of immediate early, early, and late viral proteins. |
| T73 | 1572-1738 | Sentence | denotes | The inhibition of the full temporal range of HSV-1 proteins implies that inhibition of viral replication occurs by blocking the entry of virions into the target cell. |
| T74 | 1739-1936 | Sentence | denotes | To evaluate the effect of GA on progeny virions, the supernatant of GFP-HSV-1 strain 17+ infected Vero cells at an MOI of 1 was collected after 20 h and titered by plaque reduction assay (Fig. 2D). |
| T75 | 1937-2032 | Sentence | denotes | The results showed a significant decrease of approximately 2 log in the GA-treated cell titers. |
| T76 | 2033-2317 | Sentence | denotes | Figure 2 GA inhibits HSV-1 infection. (A) 1 × 107 PFU HSV-1 strain F were treated for 1 hour with 50 µM GA (Lanes 1–3) or with vehicle (Lanes 4–6) in serum free DMEM and then were used to infect HEp2 or 293T cells at an MOI of 0.5 in 199V medium with final concentration of 2.5 µM GA. |
| T77 | 2318-2927 | Sentence | denotes | 6-well cultures of HEp-2 (A) or 293T (B) were then infected, and at 5, 10 and 29 hours post-inoculation, cells were collected and a fraction of the total cell lysate was subject to Western Blot analysis using antibodies directed against ICP8, ICP27, US11 and β-Actin. (C) HEp2 cell monolayers were treated with 10 µM GA C15:1 or vehicle for 1 hour in 199V medium and then infected with HSV-1 strain F at 4, 8, 12, 24 and 32 hours post-inoculation cells were collected and a fraction of the total cell lysate was subject to Western Blot analysis using antibodies directed against ICP8, ICP27, US11 and β-Actin. |
| T78 | 2928-3120 | Sentence | denotes | Normalized ratios of protein expression are in the bar graph. (D) Titration by plaque assay of Vero cells pretreated with 10 µM GA C15:1 or vehicle and then infected with GFP-HSV-1 strain 17+. |