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PMC:7068984 / 16036-17154 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
543 325-333 Species denotes patients Tax:9606
544 504-512 Species denotes patients Tax:9606
545 734-742 Species denotes SARS-CoV Tax:694009
546 749-757 Species denotes MERS-CoV Tax:1335626
547 768-777 Species denotes influenza Tax:11309
548 151-156 Disease denotes fever MESH:D005334
549 166-171 Disease denotes cough MESH:D003371
550 181-188 Disease denotes fatigue MESH:D005221
551 225-244 Disease denotes shortness of breath MESH:D004417
552 254-265 Disease denotes sore throat MESH:D010608
553 279-287 Disease denotes headache MESH:D006261
554 345-370 Disease denotes gastrointestinal symptoms MESH:D012817
555 377-385 Disease denotes diarrhea MESH:D003967
556 397-405 Disease denotes vomiting MESH:D014839
557 554-559 Disease denotes Fever MESH:D005334
558 564-569 Disease denotes cough MESH:D003371
559 605-631 Disease denotes upper respiratory symptoms MESH:D012818
560 636-661 Disease denotes gastrointestinal symptoms MESH:D012817
561 839-851 Disease denotes hypertension MESH:D006973
562 853-890 Disease denotes chronic obstructive pulmonary disease MESH:D029424
563 892-900 Disease denotes diabetes MESH:D003920
564 902-924 Disease denotes cardiovascular disease MESH:D002318
565 950-985 Disease denotes acute respiratory distress syndrome MESH:D012128
566 987-999 Disease denotes septic shock MESH:D012772
567 1001-1019 Disease denotes metabolic acidosis MESH:D000138
568 1040-1063 Disease denotes coagulation dysfunction MESH:D001778
569 1085-1090 Disease denotes death MESH:D003643

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T90 198-204 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T91 259-265 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T15 198-204 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T16 259-265 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T122 254-265 Disease denotes sore throat http://purl.obolibrary.org/obo/MONDO_0002258
T123 377-385 Disease denotes diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T124 734-742 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T125 768-777 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T126 839-851 Disease denotes hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T127 853-890 Disease denotes chronic obstructive pulmonary disease http://purl.obolibrary.org/obo/MONDO_0005002
T128 873-890 Disease denotes pulmonary disease http://purl.obolibrary.org/obo/MONDO_0005275
T129 892-900 Disease denotes diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T130 902-924 Disease denotes cardiovascular disease http://purl.obolibrary.org/obo/MONDO_0004995
T131 950-985 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T132 956-985 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T133 1001-1019 Disease denotes metabolic acidosis http://purl.obolibrary.org/obo/MONDO_0000440
T134 1011-1019 Disease denotes acidosis http://purl.obolibrary.org/obo/MONDO_0006022

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T146 0-1 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T147 315-316 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T148 488-490 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T149 545-547 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T150 759-761 http://purl.obolibrary.org/obo/CLO_0001407 denotes 52
T151 1092-1094 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T21 709-716 http://purl.obolibrary.org/obo/GO_0009606 denotes tropism
T22 1040-1051 http://purl.obolibrary.org/obo/GO_0050817 denotes coagulation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T111 0-301 Sentence denotes A recent study led by Prof. Nan-Shan Zhong’s team, by sampling 1099 laboratory-confirmed cases, found that the common clinical manifestations included fever (88.7%), cough (67.8%), fatigue (38.1%), sputum production (33.4%), shortness of breath (18.6%), sore throat (13.9%), and headache (13.6%) [16].
T112 302-413 Sentence denotes In addition, a part of patients manifested gastrointestinal symptoms, with diarrhea (3.8%) and vomiting (5.0%).
T113 414-553 Sentence denotes The clinical manifestations were in consistence with the previous data of 41, 99, and 138 patients analysis in Hubei province [46, 48, 50].
T114 554-783 Sentence denotes Fever and cough were the dominant symptoms whereas upper respiratory symptoms and gastrointestinal symptoms were rare, suggesting the differences in viral tropism as compared with SARS-CoV [51], MERS-CoV [52], and influenza [53].
T115 784-1118 Sentence denotes The elderly and those with underlying disorders (i.e., hypertension, chronic obstructive pulmonary disease, diabetes, cardiovascular disease), developed rapidly into acute respiratory distress syndrome, septic shock, metabolic acidosis hard to correct and coagulation dysfunction, even leading to the death [48] (lower panel, Fig. 1).

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T21 151-156 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T22 166-171 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T23 181-188 Phenotype denotes fatigue http://purl.obolibrary.org/obo/HP_0012378
T24 225-244 Phenotype denotes shortness of breath http://purl.obolibrary.org/obo/HP_0002098
T25 254-265 Phenotype denotes sore throat http://purl.obolibrary.org/obo/HP_0033050
T26 279-287 Phenotype denotes headache http://purl.obolibrary.org/obo/HP_0002315
T27 377-385 Phenotype denotes diarrhea http://purl.obolibrary.org/obo/HP_0002014
T28 397-405 Phenotype denotes vomiting http://purl.obolibrary.org/obo/HP_0002013
T29 554-559 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T30 564-569 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T31 839-851 Phenotype denotes hypertension http://purl.obolibrary.org/obo/HP_0000822
T32 853-890 Phenotype denotes chronic obstructive pulmonary disease http://purl.obolibrary.org/obo/HP_0006510
T33 902-924 Phenotype denotes cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T34 956-976 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T35 994-999 Phenotype denotes shock http://purl.obolibrary.org/obo/HP_0031273
T36 1001-1019 Phenotype denotes metabolic acidosis http://purl.obolibrary.org/obo/HP_0001942

2_test

Id Subject Object Predicate Lexical cue
32169119-31986264-70132220 545-547 31986264 denotes 48
32169119-32007143-70132221 549-551 32007143 denotes 50
32169119-12682352-70132222 744-746 12682352 denotes 51
32169119-23891402-70132223 759-761 23891402 denotes 52
32169119-27716101-70132224 779-781 27716101 denotes 53
32169119-31986264-70132225 1092-1094 31986264 denotes 48