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LitCovid-PubTator

LitCovid-PD-FMA-UBERON

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T79","span":{"begin":92,"end":109},"obj":"Body_part"},{"id":"T80","span":{"begin":510,"end":515},"obj":"Body_part"},{"id":"T81","span":{"begin":582,"end":589},"obj":"Body_part"},{"id":"T82","span":{"begin":615,"end":619},"obj":"Body_part"},{"id":"T83","span":{"begin":620,"end":645},"obj":"Body_part"},{"id":"T84","span":{"begin":640,"end":645},"obj":"Body_part"},{"id":"T85","span":{"begin":650,"end":661},"obj":"Body_part"},{"id":"T86","span":{"begin":665,"end":680},"obj":"Body_part"},{"id":"T87","span":{"begin":1486,"end":1491},"obj":"Body_part"}],"attributes":[{"id":"A79","pred":"fma_id","subj":"T79","obj":"http://purl.org/sig/ont/fma/fma265130"},{"id":"A80","pred":"fma_id","subj":"T80","obj":"http://purl.org/sig/ont/fma/fma9670"},{"id":"A81","pred":"fma_id","subj":"T81","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A82","pred":"fma_id","subj":"T82","obj":"http://purl.org/sig/ont/fma/fma7195"},{"id":"A83","pred":"fma_id","subj":"T83","obj":"http://purl.org/sig/ont/fma/fma62499"},{"id":"A84","pred":"fma_id","subj":"T84","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A85","pred":"fma_id","subj":"T85","obj":"http://purl.org/sig/ont/fma/fma62122"},{"id":"A86","pred":"fma_id","subj":"T86","obj":"http://purl.org/sig/ont/fma/fma7200"},{"id":"A87","pred":"fma_id","subj":"T87","obj":"http://purl.org/sig/ont/fma/fma67498"}],"text":"As an emerging acute respiratory infectious disease, COVID-19 primarily spreads through the respiratory tract, by droplets, respiratory secretions, and direct contact [41] for a low infective dose [42]. Otherwise, it has been reported a SARS-CoV-2 was isolated from fecal swabs of a severe pneumonia patient on 10 February 2020 from a critical case in the Fifth Affiliated Hospital, Sun Yat-Sen University, Guangdong, China. Likewise, Zhang et al. [43] have found the presence of SARS-CoV-2 in fecal swabs and blood, indicating the possibility of multiple routes transmission. ACE2 protein presents in abundance on lung alveolar epithelial cells and enterocytes of small intestine remarkably [44], which may help understand the routes of infection and disease manifestations. Based on current epidemiological investigation, the incubation period is 1–14 days, mostly 3–7 days. And the COVID-19 is contagious during the latency period [45]. It is highly transmissible in humans, especially in the elderly and people with underlying diseases. The median age of patients is 47–59 years, and 41.9–45.7% of patients were females [16, 41, 46]. As it is designated SARS-CoV-2, COVID-19 patients presented certainly similar symptoms, such as fever, malaise, and cough [47]. Most adults or children with SARS-CoV-2 infection presented with mild flu-like symptoms and a few patients are in critical condition and rapidly develop acute respiratory distress syndrome, respiratory failure, multiple organ failure, even deaths [48]."}

LitCovid-PD-UBERON

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T7","span":{"begin":92,"end":109},"obj":"Body_part"},{"id":"T8","span":{"begin":510,"end":515},"obj":"Body_part"},{"id":"T9","span":{"begin":615,"end":619},"obj":"Body_part"},{"id":"T10","span":{"begin":665,"end":680},"obj":"Body_part"},{"id":"T11","span":{"begin":671,"end":680},"obj":"Body_part"},{"id":"T12","span":{"begin":1486,"end":1491},"obj":"Body_part"}],"attributes":[{"id":"A7","pred":"uberon_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/UBERON_0000065"},{"id":"A8","pred":"uberon_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"A9","pred":"uberon_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A10","pred":"uberon_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/UBERON_0002108"},{"id":"A11","pred":"uberon_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/UBERON_0000160"},{"id":"A12","pred":"uberon_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/UBERON_0000062"}],"text":"As an emerging acute respiratory infectious disease, COVID-19 primarily spreads through the respiratory tract, by droplets, respiratory secretions, and direct contact [41] for a low infective dose [42]. Otherwise, it has been reported a SARS-CoV-2 was isolated from fecal swabs of a severe pneumonia patient on 10 February 2020 from a critical case in the Fifth Affiliated Hospital, Sun Yat-Sen University, Guangdong, China. Likewise, Zhang et al. [43] have found the presence of SARS-CoV-2 in fecal swabs and blood, indicating the possibility of multiple routes transmission. ACE2 protein presents in abundance on lung alveolar epithelial cells and enterocytes of small intestine remarkably [44], which may help understand the routes of infection and disease manifestations. Based on current epidemiological investigation, the incubation period is 1–14 days, mostly 3–7 days. And the COVID-19 is contagious during the latency period [45]. It is highly transmissible in humans, especially in the elderly and people with underlying diseases. The median age of patients is 47–59 years, and 41.9–45.7% of patients were females [16, 41, 46]. As it is designated SARS-CoV-2, COVID-19 patients presented certainly similar symptoms, such as fever, malaise, and cough [47]. Most adults or children with SARS-CoV-2 infection presented with mild flu-like symptoms and a few patients are in critical condition and rapidly develop acute respiratory distress syndrome, respiratory failure, multiple organ failure, even deaths [48]."}

LitCovid-PD-MONDO

LitCovid-PD-CLO

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T124","span":{"begin":168,"end":170},"obj":"http://purl.obolibrary.org/obo/CLO_0053794"},{"id":"T125","span":{"begin":176,"end":177},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T126","span":{"begin":217,"end":220},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T127","span":{"begin":235,"end":236},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T128","span":{"begin":281,"end":282},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T129","span":{"begin":333,"end":334},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T130","span":{"begin":510,"end":515},"obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"T131","span":{"begin":510,"end":515},"obj":"http://www.ebi.ac.uk/efo/EFO_0000296"},{"id":"T132","span":{"begin":615,"end":619},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"T133","span":{"begin":615,"end":619},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"},{"id":"T134","span":{"begin":629,"end":639},"obj":"http://purl.obolibrary.org/obo/CL_0000066"},{"id":"T135","span":{"begin":640,"end":645},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T136","span":{"begin":665,"end":680},"obj":"http://purl.obolibrary.org/obo/UBERON_0002108"},{"id":"T137","span":{"begin":849,"end":853},"obj":"http://purl.obolibrary.org/obo/CLO_0053001"},{"id":"T138","span":{"begin":935,"end":937},"obj":"http://purl.obolibrary.org/obo/CLO_0053799"},{"id":"T139","span":{"begin":970,"end":976},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T140","span":{"begin":1116,"end":1123},"obj":"http://purl.obolibrary.org/obo/UBERON_0003100"},{"id":"T141","span":{"begin":1129,"end":1131},"obj":"http://purl.obolibrary.org/obo/CLO_0053794"},{"id":"T142","span":{"begin":1358,"end":1359},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T143","span":{"begin":1486,"end":1491},"obj":"http://purl.obolibrary.org/obo/UBERON_0003103"},{"id":"T144","span":{"begin":1514,"end":1516},"obj":"http://purl.obolibrary.org/obo/CLO_0001382"}],"text":"As an emerging acute respiratory infectious disease, COVID-19 primarily spreads through the respiratory tract, by droplets, respiratory secretions, and direct contact [41] for a low infective dose [42]. Otherwise, it has been reported a SARS-CoV-2 was isolated from fecal swabs of a severe pneumonia patient on 10 February 2020 from a critical case in the Fifth Affiliated Hospital, Sun Yat-Sen University, Guangdong, China. Likewise, Zhang et al. [43] have found the presence of SARS-CoV-2 in fecal swabs and blood, indicating the possibility of multiple routes transmission. ACE2 protein presents in abundance on lung alveolar epithelial cells and enterocytes of small intestine remarkably [44], which may help understand the routes of infection and disease manifestations. Based on current epidemiological investigation, the incubation period is 1–14 days, mostly 3–7 days. And the COVID-19 is contagious during the latency period [45]. It is highly transmissible in humans, especially in the elderly and people with underlying diseases. The median age of patients is 47–59 years, and 41.9–45.7% of patients were females [16, 41, 46]. As it is designated SARS-CoV-2, COVID-19 patients presented certainly similar symptoms, such as fever, malaise, and cough [47]. Most adults or children with SARS-CoV-2 infection presented with mild flu-like symptoms and a few patients are in critical condition and rapidly develop acute respiratory distress syndrome, respiratory failure, multiple organ failure, even deaths [48]."}

LitCovid-PD-CHEBI

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T50","span":{"begin":582,"end":589},"obj":"Chemical"}],"attributes":[{"id":"A50","pred":"chebi_id","subj":"T50","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"As an emerging acute respiratory infectious disease, COVID-19 primarily spreads through the respiratory tract, by droplets, respiratory secretions, and direct contact [41] for a low infective dose [42]. Otherwise, it has been reported a SARS-CoV-2 was isolated from fecal swabs of a severe pneumonia patient on 10 February 2020 from a critical case in the Fifth Affiliated Hospital, Sun Yat-Sen University, Guangdong, China. Likewise, Zhang et al. [43] have found the presence of SARS-CoV-2 in fecal swabs and blood, indicating the possibility of multiple routes transmission. ACE2 protein presents in abundance on lung alveolar epithelial cells and enterocytes of small intestine remarkably [44], which may help understand the routes of infection and disease manifestations. Based on current epidemiological investigation, the incubation period is 1–14 days, mostly 3–7 days. And the COVID-19 is contagious during the latency period [45]. It is highly transmissible in humans, especially in the elderly and people with underlying diseases. The median age of patients is 47–59 years, and 41.9–45.7% of patients were females [16, 41, 46]. As it is designated SARS-CoV-2, COVID-19 patients presented certainly similar symptoms, such as fever, malaise, and cough [47]. Most adults or children with SARS-CoV-2 infection presented with mild flu-like symptoms and a few patients are in critical condition and rapidly develop acute respiratory distress syndrome, respiratory failure, multiple organ failure, even deaths [48]."}

LitCovid-PD-GO-BP

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T20","span":{"begin":136,"end":146},"obj":"http://purl.obolibrary.org/obo/GO_0046903"}],"text":"As an emerging acute respiratory infectious disease, COVID-19 primarily spreads through the respiratory tract, by droplets, respiratory secretions, and direct contact [41] for a low infective dose [42]. Otherwise, it has been reported a SARS-CoV-2 was isolated from fecal swabs of a severe pneumonia patient on 10 February 2020 from a critical case in the Fifth Affiliated Hospital, Sun Yat-Sen University, Guangdong, China. Likewise, Zhang et al. [43] have found the presence of SARS-CoV-2 in fecal swabs and blood, indicating the possibility of multiple routes transmission. ACE2 protein presents in abundance on lung alveolar epithelial cells and enterocytes of small intestine remarkably [44], which may help understand the routes of infection and disease manifestations. Based on current epidemiological investigation, the incubation period is 1–14 days, mostly 3–7 days. And the COVID-19 is contagious during the latency period [45]. It is highly transmissible in humans, especially in the elderly and people with underlying diseases. The median age of patients is 47–59 years, and 41.9–45.7% of patients were females [16, 41, 46]. As it is designated SARS-CoV-2, COVID-19 patients presented certainly similar symptoms, such as fever, malaise, and cough [47]. Most adults or children with SARS-CoV-2 infection presented with mild flu-like symptoms and a few patients are in critical condition and rapidly develop acute respiratory distress syndrome, respiratory failure, multiple organ failure, even deaths [48]."}

LitCovid-sentences

{"project":"LitCovid-sentences","denotations":[{"id":"T97","span":{"begin":0,"end":202},"obj":"Sentence"},{"id":"T98","span":{"begin":203,"end":424},"obj":"Sentence"},{"id":"T99","span":{"begin":425,"end":576},"obj":"Sentence"},{"id":"T100","span":{"begin":577,"end":775},"obj":"Sentence"},{"id":"T101","span":{"begin":776,"end":876},"obj":"Sentence"},{"id":"T102","span":{"begin":877,"end":939},"obj":"Sentence"},{"id":"T103","span":{"begin":940,"end":1040},"obj":"Sentence"},{"id":"T104","span":{"begin":1041,"end":1137},"obj":"Sentence"},{"id":"T105","span":{"begin":1138,"end":1265},"obj":"Sentence"},{"id":"T106","span":{"begin":1266,"end":1518},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"As an emerging acute respiratory infectious disease, COVID-19 primarily spreads through the respiratory tract, by droplets, respiratory secretions, and direct contact [41] for a low infective dose [42]. Otherwise, it has been reported a SARS-CoV-2 was isolated from fecal swabs of a severe pneumonia patient on 10 February 2020 from a critical case in the Fifth Affiliated Hospital, Sun Yat-Sen University, Guangdong, China. Likewise, Zhang et al. [43] have found the presence of SARS-CoV-2 in fecal swabs and blood, indicating the possibility of multiple routes transmission. ACE2 protein presents in abundance on lung alveolar epithelial cells and enterocytes of small intestine remarkably [44], which may help understand the routes of infection and disease manifestations. Based on current epidemiological investigation, the incubation period is 1–14 days, mostly 3–7 days. And the COVID-19 is contagious during the latency period [45]. It is highly transmissible in humans, especially in the elderly and people with underlying diseases. The median age of patients is 47–59 years, and 41.9–45.7% of patients were females [16, 41, 46]. As it is designated SARS-CoV-2, COVID-19 patients presented certainly similar symptoms, such as fever, malaise, and cough [47]. Most adults or children with SARS-CoV-2 infection presented with mild flu-like symptoms and a few patients are in critical condition and rapidly develop acute respiratory distress syndrome, respiratory failure, multiple organ failure, even deaths [48]."}

LitCovid-PD-HP

{"project":"LitCovid-PD-HP","denotations":[{"id":"T15","span":{"begin":290,"end":299},"obj":"Phenotype"},{"id":"T16","span":{"begin":1234,"end":1239},"obj":"Phenotype"},{"id":"T17","span":{"begin":1241,"end":1248},"obj":"Phenotype"},{"id":"T18","span":{"begin":1254,"end":1259},"obj":"Phenotype"},{"id":"T19","span":{"begin":1425,"end":1445},"obj":"Phenotype"},{"id":"T20","span":{"begin":1456,"end":1475},"obj":"Phenotype"}],"attributes":[{"id":"A15","pred":"hp_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A16","pred":"hp_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/HP_0001945"},{"id":"A17","pred":"hp_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/HP_0012378"},{"id":"A18","pred":"hp_id","subj":"T18","obj":"http://purl.obolibrary.org/obo/HP_0012735"},{"id":"A19","pred":"hp_id","subj":"T19","obj":"http://purl.obolibrary.org/obo/HP_0002098"},{"id":"A20","pred":"hp_id","subj":"T20","obj":"http://purl.obolibrary.org/obo/HP_0002878"}],"text":"As an emerging acute respiratory infectious disease, COVID-19 primarily spreads through the respiratory tract, by droplets, respiratory secretions, and direct contact [41] for a low infective dose [42]. Otherwise, it has been reported a SARS-CoV-2 was isolated from fecal swabs of a severe pneumonia patient on 10 February 2020 from a critical case in the Fifth Affiliated Hospital, Sun Yat-Sen University, Guangdong, China. Likewise, Zhang et al. [43] have found the presence of SARS-CoV-2 in fecal swabs and blood, indicating the possibility of multiple routes transmission. ACE2 protein presents in abundance on lung alveolar epithelial cells and enterocytes of small intestine remarkably [44], which may help understand the routes of infection and disease manifestations. Based on current epidemiological investigation, the incubation period is 1–14 days, mostly 3–7 days. And the COVID-19 is contagious during the latency period [45]. It is highly transmissible in humans, especially in the elderly and people with underlying diseases. The median age of patients is 47–59 years, and 41.9–45.7% of patients were females [16, 41, 46]. As it is designated SARS-CoV-2, COVID-19 patients presented certainly similar symptoms, such as fever, malaise, and cough [47]. Most adults or children with SARS-CoV-2 infection presented with mild flu-like symptoms and a few patients are in critical condition and rapidly develop acute respiratory distress syndrome, respiratory failure, multiple organ failure, even deaths [48]."}

2_test

{"project":"2_test","denotations":[{"id":"32169119-32065057-70132214","span":{"begin":449,"end":451},"obj":"32065057"},{"id":"32169119-15141377-70132215","span":{"begin":693,"end":695},"obj":"15141377"},{"id":"32169119-32029004-70132216","span":{"begin":935,"end":937},"obj":"32029004"},{"id":"32169119-12671061-70132217","span":{"begin":1261,"end":1263},"obj":"12671061"},{"id":"32169119-31986264-70132218","span":{"begin":1514,"end":1516},"obj":"31986264"}],"text":"As an emerging acute respiratory infectious disease, COVID-19 primarily spreads through the respiratory tract, by droplets, respiratory secretions, and direct contact [41] for a low infective dose [42]. Otherwise, it has been reported a SARS-CoV-2 was isolated from fecal swabs of a severe pneumonia patient on 10 February 2020 from a critical case in the Fifth Affiliated Hospital, Sun Yat-Sen University, Guangdong, China. Likewise, Zhang et al. [43] have found the presence of SARS-CoV-2 in fecal swabs and blood, indicating the possibility of multiple routes transmission. ACE2 protein presents in abundance on lung alveolar epithelial cells and enterocytes of small intestine remarkably [44], which may help understand the routes of infection and disease manifestations. Based on current epidemiological investigation, the incubation period is 1–14 days, mostly 3–7 days. And the COVID-19 is contagious during the latency period [45]. It is highly transmissible in humans, especially in the elderly and people with underlying diseases. The median age of patients is 47–59 years, and 41.9–45.7% of patients were females [16, 41, 46]. As it is designated SARS-CoV-2, COVID-19 patients presented certainly similar symptoms, such as fever, malaise, and cough [47]. Most adults or children with SARS-CoV-2 infection presented with mild flu-like symptoms and a few patients are in critical condition and rapidly develop acute respiratory distress syndrome, respiratory failure, multiple organ failure, even deaths [48]."}

PMC:7068984 / 14047-15565 JSONTXT

Annnotations TAB JSON ListView MergeView

PMC:7068984 / 14047-15565 JSON TXT