PMC:7068163 / 3575-3950
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 60 | 232-240 | Species | denotes | SARS-CoV | Tax:694009 |
| 61 | 245-255 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 62 | 274-284 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 63 | 327-332 | Species | denotes | human | Tax:9606 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T9 | 68-72 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T10 | 120-124 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T11 | 356-359 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T17 | 232-240 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T18 | 245-253 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T19 | 274-282 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T21 | 16-22 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
| T22 | 68-72 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T23 | 120-124 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T24 | 199-201 | http://purl.obolibrary.org/obo/CLO_0008285 | denotes | P1 |
| T25 | 217-219 | http://purl.obolibrary.org/obo/CLO_0008307 | denotes | P2 |
| T26 | 311-313 | http://purl.obolibrary.org/obo/CLO_0008307 | denotes | P2 |
| T27 | 327-332 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T7 | 199-201 | Chemical | denotes | P1 | http://purl.obolibrary.org/obo/CHEBI_60949 |
| T8 | 217-219 | Chemical | denotes | P2 | http://purl.obolibrary.org/obo/CHEBI_33472 |
| T9 | 294-299 | Chemical | denotes | probe | http://purl.obolibrary.org/obo/CHEBI_50406 |
| T10 | 311-313 | Chemical | denotes | P2 | http://purl.obolibrary.org/obo/CHEBI_33472 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 333-340 | http://purl.obolibrary.org/obo/GO_0004526 | denotes | RNAse P |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T25 | 0-318 | Sentence | denotes | Each sample was tested by three PCRs: the screening assay for the E gene and two confirmatory assays targeting the RdRp gene, all performed as recommended in [5], with either both probes (RdRP_SARSr-P1 and RdRP_SARSr-P2), detecting SARS-CoV and SARS-CoV-2, or only with the SARS-CoV-2-specific probe RdRP_SARSr-P2 [5]. |
| T26 | 319-375 | Sentence | denotes | We used human RNAse P as control for RNA extraction [7]. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32156330-31992387-29325815 | 159-160 | 31992387 | denotes | 5 |
| 32156330-31992387-29325816 | 315-316 | 31992387 | denotes | 5 |
| 32156330-16274752-29325817 | 372-373 | 16274752 | denotes | 7 |
MyTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32156330-31992387-29325815 | 159-160 | 31992387 | denotes | 5 |
| 32156330-31992387-29325816 | 315-316 | 31992387 | denotes | 5 |
| 32156330-16274752-29325817 | 372-373 | 16274752 | denotes | 7 |