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PMC:7067204 / 5363-7028 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
369 1515-1518 Gene denotes Bat Gene:570
370 1458-1461 Gene denotes Bat Gene:570
371 1401-1404 Gene denotes Bat Gene:570
372 1164-1167 Gene denotes Bat Gene:570
373 1096-1099 Gene denotes Bat Gene:570
374 1066-1069 Gene denotes bat Gene:570
375 1010-1013 Gene denotes Bat Gene:570
376 981-984 Gene denotes bat Gene:570
377 926-929 Gene denotes Bat Gene:570
378 848-851 Gene denotes Bat Gene:570
379 770-773 Gene denotes Bat Gene:570
380 700-703 Gene denotes Bat Gene:570
381 626-629 Gene denotes Bat Gene:570
382 566-569 Gene denotes Bat Gene:570
383 35-38 Gene denotes the Gene:25085
384 489-493 Gene denotes SARS Gene:6301
385 91-99 Species denotes SARS-CoV Tax:694009
386 110-134 Species denotes SARS-related coronavirus Tax:694009
387 168-176 Species denotes SARS-CoV Tax:694009
388 187-208 Species denotes SARS coronavirus BJ01 Tax:228407
389 223-249 Species denotes SARS coronavirus HKU-39849 Tax:228404
390 255-281 Species denotes SARS coronavirus HKU-39849 Tax:228404
391 301-306 Species denotes Human Tax:9606
392 307-315 Species denotes SARS-CoV Tax:694009
393 326-347 Species denotes SARS coronavirus GZ02 Tax:256753
394 362-367 Species denotes Human Tax:9606
395 368-371 Species denotes CoV Tax:11118
396 382-404 Species denotes Human coronavirus OC43 Tax:31631
397 452-480 Species denotes SARS coronavirus HC/SZ/61/03 Tax:260069
398 509-521 Species denotes Bat CoV HKU9 Tax:694006
399 529-551 Species denotes Bat coronavirus HKU9-1 Tax:424367
400 573-576 Species denotes CoV Tax:11118
401 588-611 Species denotes Bat SARS CoV Rs672/2006 Tax:722424
402 633-636 Species denotes CoV Tax:11118
403 651-685 Species denotes Bat SARS-like coronavirus RsSHC014 Tax:1415851
404 707-710 Species denotes CoV Tax:11118
405 723-755 Species denotes Bat SARS-like coronavirus Rs3367 Tax:1415834
406 777-780 Species denotes CoV Tax:11118
407 793-818 Species denotes Bat SARS-like coronavirus Tax:1508227
408 855-858 Species denotes CoV Tax:11118
409 871-896 Species denotes Bat SARS-like coronavirus Tax:1508227
410 933-936 Species denotes CoV Tax:11118
411 947-972 Species denotes Bat SARS-like coronavirus Tax:1508227
412 1017-1020 Species denotes CoV Tax:11118
413 1032-1057 Species denotes Bat SARS-like coronavirus Tax:1508227
414 1100-1103 Species denotes CoV Tax:11118
415 1117-1149 Species denotes Coronavirus BtRs-BetaCoV/YN2018C Tax:2591236
416 1168-1171 Species denotes CoV Tax:11118
417 1185-1196 Species denotes Coronavirus Tax:11118
418 1202-1209 Species denotes BetaCoV Tax:694002
419 1245-1250 Species denotes Human Tax:9606
420 1251-1260 Species denotes 2019-nCoV Tax:2697049
421 1287-1292 Species denotes Human Tax:9606
422 1293-1296 Species denotes CoV Tax:11118
423 1307-1329 Species denotes Human coronavirus 229E Tax:11137
424 1344-1358 Species denotes Human CoV HKU1 Tax:290028
425 1364-1386 Species denotes Human coronavirus HKU1 Tax:290028
426 1405-1408 Species denotes CoV Tax:11118
427 1421-1443 Species denotes Bat coronavirus HKU4-1 Tax:424359
428 1462-1465 Species denotes CoV Tax:11118
429 1478-1500 Species denotes Bat coronavirus HKU5-1 Tax:424363
430 1519-1535 Species denotes SARS-related CoV Tax:694009
431 1549-1581 Species denotes Bat coronavirus BM48-31/BGR/2008 Tax:864596
432 1596-1601 Species denotes Human Tax:9606
433 1602-1610 Species denotes MERS-CoV Tax:1335626
434 1616-1660 Species denotes Middle East respiratory syndrome coronavirus Tax:1335626
435 316-320 Species denotes GZ02 Tax:256753
436 435-446 Species denotes HC/SZ/61/03 Tax:260069
437 577-587 Species denotes Rs672 2006 Tax:722424
438 1297-1301 Species denotes 229E Tax:11137
439 1409-1415 Species denotes HKU4-1 Tax:424359
440 1466-1472 Species denotes HKU5-1 Tax:424363
441 1224-1236 CellLine denotes MN975262 HKU CVCL:U508

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T22 64-70 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T32 91-99 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T33 110-114 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T34 168-176 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T35 187-191 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T36 223-227 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T37 255-259 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T38 307-315 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T39 326-330 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T40 426-430 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T41 452-456 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T42 489-493 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T43 592-596 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T44 655-659 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T45 727-731 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T46 797-801 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T47 875-879 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T48 951-955 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T49 1036-1040 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T50 1519-1523 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T65 85-90 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T66 162-167 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T67 301-306 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T68 362-367 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T69 382-387 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T70 495-499 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T71 942-946 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T72 981-984 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T73 996-1000 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T74 1027-1031 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T75 1066-1069 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T76 1082-1086 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T77 1112-1116 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T78 1150-1154 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T79 1180-1184 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T80 1219-1223 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T81 1245-1250 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T82 1287-1292 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T83 1307-1312 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T84 1344-1349 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T85 1364-1369 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T86 1573-1576 http://purl.obolibrary.org/obo/PR_000001807 denotes BGR
T87 1596-1601 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T12 570-572 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T13 630-632 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T14 704-706 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T15 774-776 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T16 852-854 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T17 930-932 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T18 985-987 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T19 1014-1016 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T20 1070-1072 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T45 0-75 Sentence denotes Accession number Name displayed on the tree Name of full-length genome Year
T46 76-152 Sentence denotes AY274119 Human SARS-CoV Tor2 2003 SARS-related coronavirus isolate Tor2 2003
T47 153-213 Sentence denotes AY278488 Human SARS-CoV BJ01 2003 SARS coronavirus BJ01 2003
T48 214-291 Sentence denotes AY278491 SARS coronavirus HKU-39849 2003 SARS coronavirus HKU-39849 2003 2003
T49 292-352 Sentence denotes AY390556 Human SARS-CoV GZ02 2003 SARS coronavirus GZ02 2003
T50 353-409 Sentence denotes AY391777 Human CoV OC43 2003 Human coronavirus OC43 2003
T51 410-499 Sentence denotes AY515512 Paguma SARS CoV HC/SZ/61/03 2003 SARS coronavirus HC/SZ/61/03 (paguma SARS) 2018
T52 500-556 Sentence denotes EF065513 Bat CoV HKU9-1 2006 Bat coronavirus HKU9-1 2006
T53 557-616 Sentence denotes FJ588686 Bat SL-CoV Rs672 2006 Bat SARS CoV Rs672/2006 2006
T54 617-690 Sentence denotes KC881005 Bat SL-CoV RsSHC014 2013 Bat SARS-like coronavirus RsSHC014 2013
T55 691-760 Sentence denotes KC881006 Bat SL-CoV Rs3367 2013 Bat SARS-like coronavirus Rs3367 2013
T56 761-838 Sentence denotes KY417146 Bat SL-CoV Rs4231 2016 Bat SARS-like coronavirus isolate Rs4231 2016
T57 839-916 Sentence denotes KY417149 Bat SL-CoV Rs4255 2016 Bat SARS-like coronavirus isolate Rs4255 2016
T58 917-1000 Sentence denotes MG772933 Bat SL-CoV ZC45 2018 Bat SARS-like coronavirus isolate bat-SL-CoVZC45 2018
T59 1001-1086 Sentence denotes MG772934 Bat SL-CoV ZXC21 2018 Bat SARS-like coronavirus isolate bat-SL-CoVZXC21 2018
T60 1087-1154 Sentence denotes MK211377 Bat CoV YN2018C 2018 Coronavirus BtRs-BetaCoV/YN2018C 2018
T61 1155-1223 Sentence denotes MK211378 Bat CoV YN2018D 2018 Coronavirus BtRs-BetaCoV/YN2018Da 2018
T62 1224-1277 Sentence denotes MN975262 HKU-SZ-005b Human 2019-nCoV HKU-SZ-005b 2020
T63 1278-1334 Sentence denotes NC002645 Human CoV 229E 2000 Human coronavirus 229E 2000
T64 1335-1391 Sentence denotes NC006577 Human CoV HKU1 2004 Human coronavirus HKU1 2004
T65 1392-1448 Sentence denotes NC009019 Bat CoV HKU4-1 2006 Bat coronavirus HKU4-1 2006
T66 1449-1505 Sentence denotes NC009020 Bat CoV HKU5-1 2006 Bat coronavirus HKU5-1 2006
T67 1506-1586 Sentence denotes NC014470 Bat SARS-related CoV BM48-31 2009 Bat coronavirus BM48-31/BGR/2008 2008
T68 1587-1665 Sentence denotes NC019843 Human MERS-CoV 2012 Middle East respiratory syndrome coronavirus 2012