PMC:7067204 / 4893-7103 JSONTXT

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{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7067204","sourcedb":"PMC","sourceid":"7067204","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7067204","text":"Viral sequences\nThe complete genome sequence of 2019-nCoV HKU-SZ-005b was available at GenBank (accession no. MN975262) (Table 1). The representative complete genomes of other related βCoVs strains collected from human or mammals were included for comparative analysis. These included strains collected from human, bats, and Himalayan palm civet between 2003 and 2018, with one 229E coronavirus strain as the outgroup.\nTable 1. List of coronaviruses used in this study.\nAccession number Name displayed on the tree Name of full-length genome Year\nAY274119 Human SARS-CoV Tor2 2003 SARS-related coronavirus isolate Tor2 2003\nAY278488 Human SARS-CoV BJ01 2003 SARS coronavirus BJ01 2003\nAY278491 SARS coronavirus HKU-39849 2003 SARS coronavirus HKU-39849 2003 2003\nAY390556 Human SARS-CoV GZ02 2003 SARS coronavirus GZ02 2003\nAY391777 Human CoV OC43 2003 Human coronavirus OC43 2003\nAY515512 Paguma SARS CoV HC/SZ/61/03 2003 SARS coronavirus HC/SZ/61/03 (paguma SARS) 2018\nEF065513 Bat CoV HKU9-1 2006 Bat coronavirus HKU9-1 2006\nFJ588686 Bat SL-CoV Rs672 2006 Bat SARS CoV Rs672/2006 2006\nKC881005 Bat SL-CoV RsSHC014 2013 Bat SARS-like coronavirus RsSHC014 2013\nKC881006 Bat SL-CoV Rs3367 2013 Bat SARS-like coronavirus Rs3367 2013\nKY417146 Bat SL-CoV Rs4231 2016 Bat SARS-like coronavirus isolate Rs4231 2016\nKY417149 Bat SL-CoV Rs4255 2016 Bat SARS-like coronavirus isolate Rs4255 2016\nMG772933 Bat SL-CoV ZC45 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