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PMC:7067204 / 19329-19808 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1160 4-8 Gene denotes orf8 Gene:43740577
1164 437-440 Gene denotes bat Gene:570
1165 375-378 Gene denotes bat Gene:570
1166 310-313 Gene denotes bat Gene:570
1167 260-263 Gene denotes bat Gene:570
1177 353-356 Gene denotes the Gene:25085
1178 183-186 Gene denotes the Gene:25085
1179 136-139 Gene denotes the Gene:25085
1180 35-38 Gene denotes the Gene:25085
1181 0-3 Gene denotes The Gene:25085
1191 396-398 Gene denotes to Gene:6999
1199 304-308 Gene denotes orf8 Gene:43740577
1200 108-112 Gene denotes orf8 Gene:43740577
1226 73-81 Species denotes SARS-CoV Tax:694009
1227 120-128 Species denotes SARS-CoV Tax:694009
1228 160-168 Species denotes SARS-CoV Tax:694009
1229 200-205 Species denotes human Tax:9606
1230 206-214 Species denotes SARS-CoV Tax:694009
1231 228-236 Species denotes SARS-CoV Tax:694009
1232 245-253 Species denotes SARS-CoV Tax:694009
1233 264-280 Species denotes SARS-related-CoV Tax:694009
1234 314-317 Species denotes CoV Tax:11118
1235 342-351 Species denotes 2019-nCoV Tax:2697049
1236 379-395 Species denotes SARS-related-CoV Tax:694009
1237 399-408 Species denotes 2019-nCoV Tax:2697049
1238 412-415 Species denotes CoV Tax:11118
1239 441-457 Species denotes SARS-related-CoV Tax:694009
1249 129-133 Species denotes GZ02 Tax:256753
1250 458-462 Species denotes HKU3 Tax:290028

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T94 9-16 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T92 73-81 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T93 120-128 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T94 160-168 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T95 206-214 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T96 228-236 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T97 245-253 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T98 264-268 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T99 379-383 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T100 441-445 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T227 114-119 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T228 200-205 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T229 260-263 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T230 310-313 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T231 375-378 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T232 437-440 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T233 475-476 http://purl.obolibrary.org/obo/CLO_0001020 denotes A

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T127 9-16 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T128 409-411 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T202 0-479 Sentence denotes The orf8 protein sequences used in the analysis derived from early phase SARS-CoV that includes full-length orf8 (human SARS-CoV GZ02), the mid- and late-phase SARS-CoV that includes the split orf8b (human SARS-CoV Tor2), civet SARS-CoV (paguma SARS-CoV), two bat SARS-related-CoV containing full-length orf8 (bat-CoV YNLF_31C and YNLF_34C), 2019-nCoV, the other two closest bat SARS-related-CoV to 2019-nCoV SL-CoV ZXC21 and ZC45), and bat SARS-related-CoV HKU3-1 (Figure 5(A)).