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PMC:7054964 / 9949-11613 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
172 341-349 Species denotes patients Tax:9606
173 533-540 Species denotes Patient Tax:9606
174 749-756 Species denotes patient Tax:9606
175 887-894 Species denotes patient Tax:9606
176 1246-1254 Species denotes patients Tax:9606
177 1440-1448 Species denotes patients Tax:9606
178 1623-1631 Species denotes patients Tax:9606
179 332-340 Disease denotes infected MESH:D007239

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T61 86-93 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T62 175-178 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T63 194-211 Body_part denotes respiratory tract http://purl.org/sig/ont/fma/fma265130
T64 303-308 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T65 409-414 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T66 421-424 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T67 498-503 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T68 619-622 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T69 630-635 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T70 919-924 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T71 1019-1024 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T72 1039-1044 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T73 1141-1144 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T74 1157-1172 Body_part denotes digestive tract http://purl.org/sig/ont/fma/fma317863
T75 1280-1283 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T36 194-211 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T37 303-308 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T38 409-414 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T39 498-503 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T40 630-635 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T41 919-924 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T42 1019-1024 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T43 1039-1044 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T44 1157-1172 Body_part denotes digestive tract http://purl.obolibrary.org/obo/UBERON_0001555

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T152 57-62 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T153 303-308 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T154 303-308 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T155 309-313 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T156 457-458 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T157 498-503 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T158 498-503 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T159 553-554 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T160 767-771 http://purl.obolibrary.org/obo/CLO_0001236 denotes 2(A)
T161 789-790 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T162 907-908 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T163 1135-1140 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T164 1157-1172 http://purl.obolibrary.org/obo/UBERON_0001555 denotes digestive tract
T165 1274-1279 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T166 1548-1553 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T11 513-518 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T80 0-112 Sentence denotes In this retrospective study, we analyzed the PCR data of virus detection in different tissues in our laboratory.
T81 113-295 Sentence denotes Firstly, our observation indicated that the presence of viral RNA outside of the respiratory tract might herald the severity of the disease and alarm the requirement of special care.
T82 296-532 Sentence denotes In the blood test cohort, all the 6 infected patients were in (or later progressed to) severe disease stage when serum viral RNA became detectable, which showed a significant difference compared to the blood negative group (p = 0.0001).
T83 533-696 Sentence denotes Patient 2 (Figure 2(B)), 5 (Figure 3(C)) and 6 (Figure 3(D)) all had detectable viral RNA in the serum before they progressed to the clinical severe symptom stage.
T84 697-987 Sentence denotes Unfortunately, we missed the earlier time points of patient 1 (Figure 2(A)) and 3 (Figure 3(A)) who were directly admitted to ICU on transfer to our hospital because of severe condition, of patient 4 (Figure 3(B)) who had serum sample collected one day post the diagnosis of severe illness.
T85 988-1079 Sentence denotes We, fortunately, observed high serum viral load in serum within their severe illness stage.
T86 1080-1239 Sentence denotes In the anal swab cohort, we found that the presence of virus RNA in the anal digestive tract was also positively correlated with disease severity (p = 0.0102).
T87 1240-1369 Sentence denotes The 3 patients detected with anal virus RNA but in mild stage should be monitored whether they will progress to the severe stage.
T88 1370-1534 Sentence denotes We have summarized the information of approximately 70 percent of the patients in Guangzhou city, and the study represented nearly the whole picture of this region.
T89 1535-1664 Sentence denotes However, the virus outbroke in such an emergence, allowing no delay in waiting for more patients to further confirm the findings.