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PMC:7054527 / 7822-9021 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
293 666-670 Gene denotes ACE2 Gene:59272
294 718-722 Gene denotes ACE2 Gene:59272
295 803-807 Gene denotes ACE2 Gene:59272
296 985-989 Gene denotes ACE2 Gene:59272
297 292-297 Gene denotes ~1–14
298 6-15 Species denotes 2019-nCoV Tax:2697049
299 258-267 Species denotes 2019-nCov Tax:2697049
300 581-590 Species denotes 2019-nCov Tax:2697049
301 627-643 Species denotes SARS coronavirus Tax:694009
302 688-697 Species denotes 2019-nCoV Tax:2697049
303 772-777 Species denotes human Tax:9606
304 781-786 Species denotes human Tax:9606
305 972-977 Species denotes human Tax:9606
306 1107-1116 Species denotes 2019-nCoV Tax:2697049
307 244-252 Disease denotes infected MESH:D007239
308 493-501 Disease denotes infected MESH:D007239
309 1081-1099 Disease denotes SARS-CoV infection MESH:C000657245

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T43 483-489 Body_part denotes saliva http://purl.org/sig/ont/fma/fma59862
T44 602-606 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T45 671-675 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T46 747-752 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T47 809-814 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T48 866-883 Body_part denotes respiratory tract http://purl.org/sig/ont/fma/fma265130
T49 900-905 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T50 938-957 Body_part denotes salivary gland duct http://purl.org/sig/ont/fma/fma59908
T51 958-968 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T52 978-983 Body_part denotes mouth http://purl.org/sig/ont/fma/fma49184
T53 991-1007 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T54 1002-1007 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T55 1011-1031 Body_part denotes salivary gland ducts http://purl.org/sig/ont/fma/fma59908
T56 1011-1025 Body_part denotes salivary gland http://purl.org/sig/ont/fma/fma9597

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T18 483-489 Body_part denotes saliva http://purl.obolibrary.org/obo/UBERON_0001836
T19 866-883 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T20 947-952 Body_part denotes gland http://purl.obolibrary.org/obo/UBERON_0002530
T21 953-957 Body_part denotes duct http://purl.obolibrary.org/obo/UBERON_0000058
T22 958-968 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T23 978-983 Body_part denotes mouth http://purl.obolibrary.org/obo/UBERON_0000165
T24 1020-1025 Body_part denotes gland http://purl.obolibrary.org/obo/UBERON_0002530

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T50 627-631 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T51 1081-1089 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T52 1081-1085 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T66 268-271 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T67 293-297 http://purl.obolibrary.org/obo/CLO_0053001 denotes 1–14
T68 455-462 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T69 557-560 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T70 602-606 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T71 671-675 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T72 726-727 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T73 747-752 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T74 772-777 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T75 781-786 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T76 809-814 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T77 900-905 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T78 947-952 http://purl.obolibrary.org/obo/UBERON_0002530 denotes gland
T79 947-952 http://www.ebi.ac.uk/efo/EFO_0000797 denotes gland
T80 953-957 http://purl.obolibrary.org/obo/UBERON_0000025 denotes duct
T81 953-957 http://purl.obolibrary.org/obo/UBERON_0000058 denotes duct
T82 958-968 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T83 972-977 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T84 978-983 http://www.ebi.ac.uk/efo/EFO_0000825 denotes mouth
T85 991-1001 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T86 1002-1007 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T87 1020-1025 http://purl.obolibrary.org/obo/UBERON_0002530 denotes gland
T88 1020-1025 http://www.ebi.ac.uk/efo/EFO_0000797 denotes gland
T89 1026-1031 http://purl.obolibrary.org/obo/UBERON_0000025 denotes ducts
T90 1026-1031 http://purl.obolibrary.org/obo/UBERON_0000058 denotes ducts
T91 1056-1057 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T92 1174-1177 http://purl.obolibrary.org/obo/CLO_0051582 denotes has

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T49 0-179 Sentence denotes Since 2019-nCoV can be passed directly from person to person by respiratory droplets, emerging evidence suggested that it may also be transmitted through contact and fomites43,48.
T50 180-425 Sentence denotes In addition, the asymptomatic incubation period for individuals infected with 2019-nCov has been reported to be ~1–14 days, and after 24 days individuals were reported, and it was confirmed that those without symptoms can spread the virus4,5,49.
T51 426-540 Sentence denotes To et al. reported that live viruses were present in the saliva of infected individuals by viral culture method43.
T52 541-687 Sentence denotes Furthermore, it has been confirmed that 2019-nCov enters the cell in the same path as SARS coronavirus, that is, through the ACE2 cell receptor25.
T53 688-802 Sentence denotes 2019-nCoV can effectively use ACE2 as a receptor to invade cells, which may promote human-to-human transmission11.
T54 803-984 Sentence denotes ACE2+ cells were found to be abundantly present throughout the respiratory tract, as well as the cells morphologically compatible with salivary gland duct epithelium in human mouth.
T55 985-1199 Sentence denotes ACE2+ epithelial cells of salivary gland ducts were demonstrated to be a class early targets of SARS-CoV infection50, and 2019-nCoV is likely to be the same situation, although no research has been reported so far.

2_test

Id Subject Object Predicate Lexical cue
32127517-32044389-53455642 176-178 32044389 denotes 48
32127517-31986264-53455643 418-419 31986264 denotes 4
32127517-21289121-53455644 1099-1101 21289121 denotes 50
T52401 176-178 32044389 denotes 48
T76856 418-419 31986264 denotes 4
T21772 1099-1101 21289121 denotes 50