PMC:7048180 / 8507-9569
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7048180","sourcedb":"PMC","sourceid":"7048180","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7048180","text":"Notably, one SARS-CoV-specific antibody, CR3022, was found to bind potently with 2019-nCoV RBD as determined by ELISA and BLI (Figure 1(e,f)). It followed a fast-on (kon of 1.84 × 105 Ms−1) and slow-off (koff of 1.16 × 10−3 s−1) binding kinetics, resulting in a KD of 6.3 nM (Figure 1(f)). This antibody was isolated from blood of a convalescent SARS patient and did not compete with the antibody CR3014 for binding to recombinant S protein [5]. To further elucidate the binding epitopes of CR3022, we measured the competition of CR3022 and human ACE2 for the binding to 2019-nCoV RBD. The streptavidin biosensors labelled with biotinylated 2019-nCoV RBD were saturated with human ACE2 in solution, followed by the addition of the test antibodies in the presence of ACE2. As shown in Figure 1(g), the antibody CR3022 did not show any competition with ACE2 for the binding to 2019-nCoV RBD. These results suggest that CR3022, distinct from the other two SARS-CoV antibodies, recognizes an epitope that does not overlap with the ACE2 binding site of 2019-nCoV RBD.","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T32","span":{"begin":31,"end":39},"obj":"Body_part"},{"id":"T33","span":{"begin":295,"end":303},"obj":"Body_part"},{"id":"T34","span":{"begin":322,"end":327},"obj":"Body_part"},{"id":"T35","span":{"begin":388,"end":396},"obj":"Body_part"},{"id":"T36","span":{"begin":433,"end":440},"obj":"Body_part"},{"id":"T37","span":{"begin":801,"end":809},"obj":"Body_part"}],"attributes":[{"id":"A32","pred":"fma_id","subj":"T32","obj":"http://purl.org/sig/ont/fma/fma62871"},{"id":"A33","pred":"fma_id","subj":"T33","obj":"http://purl.org/sig/ont/fma/fma62871"},{"id":"A34","pred":"fma_id","subj":"T34","obj":"http://purl.org/sig/ont/fma/fma9670"},{"id":"A35","pred":"fma_id","subj":"T35","obj":"http://purl.org/sig/ont/fma/fma62871"},{"id":"A36","pred":"fma_id","subj":"T36","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A37","pred":"fma_id","subj":"T37","obj":"http://purl.org/sig/ont/fma/fma62871"},{"subj":"T32","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T33","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T34","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T35","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T36","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T37","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T2","span":{"begin":322,"end":327},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T44","span":{"begin":13,"end":21},"obj":"Disease"},{"id":"T45","span":{"begin":346,"end":350},"obj":"Disease"},{"id":"T46","span":{"begin":953,"end":961},"obj":"Disease"}],"attributes":[{"id":"A44","pred":"mondo_id","subj":"T44","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A45","pred":"mondo_id","subj":"T45","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A46","pred":"mondo_id","subj":"T46","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T44","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T45","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T46","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T51","span":{"begin":155,"end":156},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T52","span":{"begin":166,"end":169},"obj":"http://purl.obolibrary.org/obo/CLO_0009946"},{"id":"T53","span":{"begin":184,"end":188},"obj":"http://purl.obolibrary.org/obo/CLO_0007875"},{"id":"T54","span":{"begin":184,"end":188},"obj":"http://purl.obolibrary.org/obo/CLO_0050048"},{"id":"T55","span":{"begin":184,"end":188},"obj":"http://purl.obolibrary.org/obo/CLO_0052410"},{"id":"T56","span":{"begin":224,"end":227},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T57","span":{"begin":260,"end":264},"obj":"http://purl.obolibrary.org/obo/CLO_0001692"},{"id":"T58","span":{"begin":322,"end":327},"obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"T59","span":{"begin":322,"end":327},"obj":"http://www.ebi.ac.uk/efo/EFO_0000296"},{"id":"T60","span":{"begin":331,"end":332},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T61","span":{"begin":541,"end":546},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T62","span":{"begin":614,"end":622},"obj":"http://purl.obolibrary.org/obo/CLO_0007225"},{"id":"T63","span":{"begin":675,"end":680},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T64","span":{"begin":731,"end":735},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"}],"attributes":[{"subj":"T51","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T52","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T53","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T54","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T55","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T56","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T57","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T58","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T59","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T60","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T61","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T62","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T63","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T64","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T47","span":{"begin":262,"end":264},"obj":"Chemical"},{"id":"T48","span":{"begin":433,"end":440},"obj":"Chemical"},{"id":"T49","span":{"begin":689,"end":697},"obj":"Chemical"},{"id":"T50","span":{"begin":988,"end":995},"obj":"Chemical"}],"attributes":[{"id":"A47","pred":"chebi_id","subj":"T47","obj":"http://purl.obolibrary.org/obo/CHEBI_73601"},{"id":"A48","pred":"chebi_id","subj":"T48","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A49","pred":"chebi_id","subj":"T49","obj":"http://purl.obolibrary.org/obo/CHEBI_75958"},{"id":"A50","pred":"chebi_id","subj":"T50","obj":"http://purl.obolibrary.org/obo/CHEBI_53000"},{"subj":"T47","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T48","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T49","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T50","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T52","span":{"begin":0,"end":142},"obj":"Sentence"},{"id":"T53","span":{"begin":143,"end":289},"obj":"Sentence"},{"id":"T54","span":{"begin":290,"end":445},"obj":"Sentence"},{"id":"T55","span":{"begin":446,"end":585},"obj":"Sentence"},{"id":"T56","span":{"begin":586,"end":771},"obj":"Sentence"},{"id":"T57","span":{"begin":772,"end":889},"obj":"Sentence"},{"id":"T58","span":{"begin":890,"end":1062},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T52","pred":"source","obj":"LitCovid-sentences"},{"subj":"T53","pred":"source","obj":"LitCovid-sentences"},{"subj":"T54","pred":"source","obj":"LitCovid-sentences"},{"subj":"T55","pred":"source","obj":"LitCovid-sentences"},{"subj":"T56","pred":"source","obj":"LitCovid-sentences"},{"subj":"T57","pred":"source","obj":"LitCovid-sentences"},{"subj":"T58","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"317","span":{"begin":547,"end":551},"obj":"Gene"},{"id":"318","span":{"begin":681,"end":685},"obj":"Gene"},{"id":"319","span":{"begin":766,"end":770},"obj":"Gene"},{"id":"320","span":{"begin":851,"end":855},"obj":"Gene"},{"id":"321","span":{"begin":1027,"end":1031},"obj":"Gene"},{"id":"322","span":{"begin":81,"end":90},"obj":"Species"},{"id":"323","span":{"begin":351,"end":358},"obj":"Species"},{"id":"324","span":{"begin":541,"end":546},"obj":"Species"},{"id":"325","span":{"begin":571,"end":580},"obj":"Species"},{"id":"326","span":{"begin":641,"end":650},"obj":"Species"},{"id":"327","span":{"begin":675,"end":680},"obj":"Species"},{"id":"328","span":{"begin":875,"end":884},"obj":"Species"},{"id":"329","span":{"begin":1048,"end":1057},"obj":"Species"},{"id":"330","span":{"begin":13,"end":21},"obj":"Species"},{"id":"331","span":{"begin":953,"end":961},"obj":"Species"},{"id":"332","span":{"begin":41,"end":47},"obj":"Chemical"},{"id":"333","span":{"begin":397,"end":403},"obj":"Chemical"},{"id":"334","span":{"begin":491,"end":497},"obj":"Chemical"},{"id":"335","span":{"begin":530,"end":536},"obj":"Chemical"},{"id":"336","span":{"begin":810,"end":816},"obj":"Chemical"},{"id":"337","span":{"begin":917,"end":923},"obj":"Chemical"}],"attributes":[{"id":"A317","pred":"tao:has_database_id","subj":"317","obj":"Gene:59272"},{"id":"A318","pred":"tao:has_database_id","subj":"318","obj":"Gene:59272"},{"id":"A319","pred":"tao:has_database_id","subj":"319","obj":"Gene:59272"},{"id":"A320","pred":"tao:has_database_id","subj":"320","obj":"Gene:59272"},{"id":"A321","pred":"tao:has_database_id","subj":"321","obj":"Gene:59272"},{"id":"A322","pred":"tao:has_database_id","subj":"322","obj":"Tax:2697049"},{"id":"A323","pred":"tao:has_database_id","subj":"323","obj":"Tax:9606"},{"id":"A324","pred":"tao:has_database_id","subj":"324","obj":"Tax:9606"},{"id":"A325","pred":"tao:has_database_id","subj":"325","obj":"Tax:2697049"},{"id":"A326","pred":"tao:has_database_id","subj":"326","obj":"Tax:2697049"},{"id":"A327","pred":"tao:has_database_id","subj":"327","obj":"Tax:9606"},{"id":"A328","pred":"tao:has_database_id","subj":"328","obj":"Tax:2697049"},{"id":"A329","pred":"tao:has_database_id","subj":"329","obj":"Tax:2697049"},{"id":"A330","pred":"tao:has_database_id","subj":"330","obj":"Tax:694009"},{"id":"A331","pred":"tao:has_database_id","subj":"331","obj":"Tax:694009"},{"subj":"317","pred":"source","obj":"LitCovid-PubTator"},{"subj":"318","pred":"source","obj":"LitCovid-PubTator"},{"subj":"319","pred":"source","obj":"LitCovid-PubTator"},{"subj":"320","pred":"source","obj":"LitCovid-PubTator"},{"subj":"321","pred":"source","obj":"LitCovid-PubTator"},{"subj":"322","pred":"source","obj":"LitCovid-PubTator"},{"subj":"323","pred":"source","obj":"LitCovid-PubTator"},{"subj":"324","pred":"source","obj":"LitCovid-PubTator"},{"subj":"325","pred":"source","obj":"LitCovid-PubTator"},{"subj":"326","pred":"source","obj":"LitCovid-PubTator"},{"subj":"327","pred":"source","obj":"LitCovid-PubTator"},{"subj":"328","pred":"source","obj":"LitCovid-PubTator"},{"subj":"329","pred":"source","obj":"LitCovid-PubTator"},{"subj":"330","pred":"source","obj":"LitCovid-PubTator"},{"subj":"331","pred":"source","obj":"LitCovid-PubTator"},{"subj":"332","pred":"source","obj":"LitCovid-PubTator"},{"subj":"333","pred":"source","obj":"LitCovid-PubTator"},{"subj":"334","pred":"source","obj":"LitCovid-PubTator"},{"subj":"335","pred":"source","obj":"LitCovid-PubTator"},{"subj":"336","pred":"source","obj":"LitCovid-PubTator"},{"subj":"337","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#ec9c93","default":true},{"id":"LitCovid-PD-UBERON","color":"#93a4ec"},{"id":"LitCovid-PD-MONDO","color":"#beec93"},{"id":"LitCovid-PD-CLO","color":"#ec93d8"},{"id":"LitCovid-PD-CHEBI","color":"#93ece6"},{"id":"LitCovid-sentences","color":"#eccc93"},{"id":"LitCovid-PubTator","color":"#b293ec"}]}]}}