PMC:7045880 / 1381-2380
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
72 | 268-273 | Gene | denotes | spike | Gene:43740568 |
73 | 0-11 | Species | denotes | Coronavirus | Tax:11118 |
74 | 104-115 | Species | denotes | Coronavirus | Tax:11118 |
75 | 137-150 | Species | denotes | Coronaviridae | Tax:11118 |
76 | 201-214 | Species | denotes | coronaviruses | Tax:11118 |
77 | 431-437 | Species | denotes | humans | Tax:9606 |
78 | 638-651 | Species | denotes | coronaviruses | Tax:11118 |
79 | 686-692 | Species | denotes | humans | Tax:9606 |
80 | 707-723 | Species | denotes | coronavirus 229E | Tax:11137 |
81 | 795-840 | Species | denotes | severe acute respiratory syndrome-coronavirus | Tax:694009 |
82 | 842-850 | Species | denotes | SARS-CoV | Tax:694009 |
83 | 865-920 | Species | denotes | Middle East respiratory syndrome-coronavirus (MERS-CoV) | Tax:1335626 |
84 | 731-735 | Species | denotes | NL63 | Tax:277944 |
85 | 465-473 | Disease | denotes | Infected | MESH:D007239 |
86 | 673-682 | Disease | denotes | infection | MESH:D007239 |
87 | 944-964 | Disease | denotes | respiratory diseases | MESH:D012140 |
88 | 973-982 | Disease | denotes | pneumonia | MESH:D011014 |
89 | 987-992 | Disease | denotes | death | MESH:D003643 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T8 | 18-21 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
T9 | 73-76 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
T10 | 274-281 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T3 | 606-612 | Body_part | denotes | organs | http://purl.obolibrary.org/obo/UBERON_0000062 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T12 | 673-682 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T13 | 795-828 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
T14 | 842-850 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T15 | 944-964 | Disease | denotes | respiratory diseases | http://purl.obolibrary.org/obo/MONDO_0005087 |
T16 | 973-982 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18 | 22-27 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T19 | 94-96 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
T20 | 100-102 | http://purl.obolibrary.org/obo/CLO_0007074 | denotes | kb |
T21 | 100-102 | http://purl.obolibrary.org/obo/CLO_0051988 | denotes | kb |
T22 | 291-292 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T23 | 374-379 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T24 | 399-400 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T25 | 431-437 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | humans |
T26 | 598-612 | http://purl.obolibrary.org/obo/UBERON_0003133 | denotes | genital organs |
T27 | 686-692 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | humans |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T3 | 171-176 | Chemical | denotes | alpha | http://purl.obolibrary.org/obo/CHEBI_30216 |
T4 | 178-182 | Chemical | denotes | beta | http://purl.obolibrary.org/obo/CHEBI_10545 |
T5 | 195-200 | Chemical | denotes | gamma | http://purl.obolibrary.org/obo/CHEBI_30212 |
T6 | 274-281 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T7 | 308-313 | Chemical | denotes | crown | http://purl.obolibrary.org/obo/CHEBI_37409 |
T8 | 343-351 | Chemical | denotes | electron | http://purl.obolibrary.org/obo/CHEBI_10545 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32149036-30531947-81764444 | 216-217 | 30531947 | denotes | 1 |
32149036-24737708-81764445 | 364-365 | 24737708 | denotes | 3 |
32149036-31522710-81764446 | 366-367 | 31522710 | denotes | 4 |
32149036-30531947-81764447 | 614-615 | 30531947 | denotes | 1 |
32149036-29551135-81764448 | 994-995 | 29551135 | denotes | 5 |
32149036-27344959-81764449 | 996-997 | 27344959 | denotes | 6 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18 | 0-103 | Sentence | denotes | Coronavirus is an RNA virus consisting of positive-sense single-stranded RNA of approximately 27–32 kb. |
T19 | 104-221 | Sentence | denotes | Coronavirus belong to the family Coronaviridae, which comprises of alpha, beta, delta, and gamma coronaviruses [1,2]. |
T20 | 222-369 | Sentence | denotes | As the name indicates, the spherical external spike protein displays a characteristic crown shape when observed under an electron microscope [3,4]. |
T21 | 370-464 | Sentence | denotes | The virus is known to infect a wide range of hosts including humans, other mammals, and birds. |
T22 | 465-619 | Sentence | denotes | Infected hosts exhibit different clinical courses, ranging from asymptomatic to severe symptoms in their respiratory, digestive, and genital organs [1,2]. |
T23 | 620-693 | Sentence | denotes | There are 6 known coronaviruses that typically cause infection in humans. |
T24 | 694-999 | Sentence | denotes | Among these, coronavirus 229E, OC43, NL63, and HKU1 generally cause mild cold-like symptoms, whereas severe acute respiratory syndrome-coronavirus (SARS-CoV) in 2003, and Middle East respiratory syndrome-coronavirus (MERS-CoV) in 2012, caused severe respiratory diseases such as pneumonia and death [5,6]. |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T5 | 973-982 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |