PMC:7039910 / 23917-26049 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"281","span":{"begin":440,"end":448},"obj":"Species"},{"id":"282","span":{"begin":480,"end":488},"obj":"Species"},{"id":"283","span":{"begin":364,"end":374},"obj":"Disease"},{"id":"284","span":{"begin":391,"end":396},"obj":"Disease"},{"id":"285","span":{"begin":400,"end":408},"obj":"Disease"},{"id":"286","span":{"begin":453,"end":471},"obj":"Disease"},{"id":"287","span":{"begin":568,"end":573},"obj":"Disease"},{"id":"290","span":{"begin":1511,"end":1522},"obj":"Chemical"},{"id":"291","span":{"begin":1561,"end":1572},"obj":"Chemical"}],"attributes":[{"id":"A281","pred":"tao:has_database_id","subj":"281","obj":"Tax:694009"},{"id":"A282","pred":"tao:has_database_id","subj":"282","obj":"Tax:9606"},{"id":"A283","pred":"tao:has_database_id","subj":"283","obj":"MESH:D007239"},{"id":"A284","pred":"tao:has_database_id","subj":"284","obj":"MESH:D005334"},{"id":"A285","pred":"tao:has_database_id","subj":"285","obj":"MESH:C000657245"},{"id":"A286","pred":"tao:has_database_id","subj":"286","obj":"MESH:D018352"},{"id":"A287","pred":"tao:has_database_id","subj":"287","obj":"MESH:D005334"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Estimation of the epidemic trend assuming the prevention and control measures are sufficient\nThis section discussed the scenario where the current prevention and control measures are sufficient. The set of S, E, I, R, σ, and γ is the same as the first section except that we also explored the model with E at 30 times of I to provide a possible range of number of infections. The absence of fever in COVID-19 cases is more frequent than in SARS-CoV and MERS-CoV infection35. Such patients may be missed since the current surveillance case definition focused mainly on fever detection. Accordingly, the possibility of E at 30 times of I cannot be excluded.\nR0 in this section was chosen by phases. The first phase ranges from 1 December 2019 to 23 January 2020 and can be regarded as the early phase of the epidemic when a few prevention and control measures were implemented. R0 was set as 3.1 consistent with Imai et al.’s9 estimation of high transmission level. On 23 January 2020, airplanes, trains, and other public transportation within the city were restricted and other prevention and control measures such as quarantine and isolation were gradually established in Wuhan20. So, the second phase began on 24 January and Rt was set as 2.6 consistent with Imai et al.’s9 estimation of moderate transmission level. Second February was the last day of the extended Spring Festival holiday and Chinese authorities mobilized more medical resources to support Wuhan ever since36. The newly constructed hospital “Huoshenshan” came into service on this day37 and “Leishenshan,” mobile cabin hospitals several days later38. Also, more and more medical teams arrived in Wuhan. So the third phase began on 3 February and Rt was set as 1.9 consistent with Imai et al.’s9 estimation of low transmission level. All of these measures may need one longest incubation period to take effect. So, the last phase began on 16 February and Rt was set as 0.9 and 0.5, respectively, assuming the prevention and control measures are sufficient and effective to depict two different levels of effect of the measures in reducing transmission probability."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T13","span":{"begin":391,"end":396},"obj":"Phenotype"},{"id":"T14","span":{"begin":568,"end":573},"obj":"Phenotype"}],"attributes":[{"id":"A13","pred":"hp_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/HP_0001945"},{"id":"A14","pred":"hp_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/HP_0001945"}],"text":"Estimation of the epidemic trend assuming the prevention and control measures are sufficient\nThis section discussed the scenario where the current prevention and control measures are sufficient. The set of S, E, I, R, σ, and γ is the same as the first section except that we also explored the model with E at 30 times of I to provide a possible range of number of infections. The absence of fever in COVID-19 cases is more frequent than in SARS-CoV and MERS-CoV infection35. Such patients may be missed since the current surveillance case definition focused mainly on fever detection. Accordingly, the possibility of E at 30 times of I cannot be excluded.\nR0 in this section was chosen by phases. The first phase ranges from 1 December 2019 to 23 January 2020 and can be regarded as the early phase of the epidemic when a few prevention and control measures were implemented. R0 was set as 3.1 consistent with Imai et al.’s9 estimation of high transmission level. On 23 January 2020, airplanes, trains, and other public transportation within the city were restricted and other prevention and control measures such as quarantine and isolation were gradually established in Wuhan20. So, the second phase began on 24 January and Rt was set as 2.6 consistent with Imai et al.’s9 estimation of moderate transmission level. Second February was the last day of the extended Spring Festival holiday and Chinese authorities mobilized more medical resources to support Wuhan ever since36. The newly constructed hospital “Huoshenshan” came into service on this day37 and “Leishenshan,” mobile cabin hospitals several days later38. Also, more and more medical teams arrived in Wuhan. So the third phase began on 3 February and Rt was set as 1.9 consistent with Imai et al.’s9 estimation of low transmission level. All of these measures may need one longest incubation period to take effect. So, the last phase began on 16 February and Rt was set as 0.9 and 0.5, respectively, assuming the prevention and control measures are sufficient and effective to depict two different levels of effect of the measures in reducing transmission probability."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T87","span":{"begin":364,"end":374},"obj":"Disease"},{"id":"T88","span":{"begin":400,"end":408},"obj":"Disease"},{"id":"T89","span":{"begin":440,"end":448},"obj":"Disease"}],"attributes":[{"id":"A87","pred":"mondo_id","subj":"T87","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A88","pred":"mondo_id","subj":"T88","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A89","pred":"mondo_id","subj":"T89","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"Estimation of the epidemic trend assuming the prevention and control measures are sufficient\nThis section discussed the scenario where the current prevention and control measures are sufficient. The set of S, E, I, R, σ, and γ is the same as the first section except that we also explored the model with E at 30 times of I to provide a possible range of number of infections. The absence of fever in COVID-19 cases is more frequent than in SARS-CoV and MERS-CoV infection35. Such patients may be missed since the current surveillance case definition focused mainly on fever detection. Accordingly, the possibility of E at 30 times of I cannot be excluded.\nR0 in this section was chosen by phases. The first phase ranges from 1 December 2019 to 23 January 2020 and can be regarded as the early phase of the epidemic when a few prevention and control measures were implemented. R0 was set as 3.1 consistent with Imai et al.’s9 estimation of high transmission level. On 23 January 2020, airplanes, trains, and other public transportation within the city were restricted and other prevention and control measures such as quarantine and isolation were gradually established in Wuhan20. So, the second phase began on 24 January and Rt was set as 2.6 consistent with Imai et al.’s9 estimation of moderate transmission level. Second February was the last day of the extended Spring Festival holiday and Chinese authorities mobilized more medical resources to support Wuhan ever since36. The newly constructed hospital “Huoshenshan” came into service on this day37 and “Leishenshan,” mobile cabin hospitals several days later38. Also, more and more medical teams arrived in Wuhan. So the third phase began on 3 February and Rt was set as 1.9 consistent with Imai et al.’s9 estimation of low transmission level. All of these measures may need one longest incubation period to take effect. So, the last phase began on 16 February and Rt was set as 0.9 and 0.5, respectively, assuming the prevention and control measures are sufficient and effective to depict two different levels of effect of the measures in reducing transmission probability."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T86","span":{"begin":334,"end":335},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T87","span":{"begin":550,"end":557},"obj":"http://purl.obolibrary.org/obo/CLO_0009985"},{"id":"T88","span":{"begin":820,"end":821},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T89","span":{"begin":922,"end":924},"obj":"http://purl.obolibrary.org/obo/CLO_0008935"},{"id":"T90","span":{"begin":1272,"end":1274},"obj":"http://purl.obolibrary.org/obo/CLO_0008935"},{"id":"T91","span":{"begin":1761,"end":1763},"obj":"http://purl.obolibrary.org/obo/CLO_0008935"}],"text":"Estimation of the epidemic trend assuming the prevention and control measures are sufficient\nThis section discussed the scenario where the current prevention and control measures are sufficient. The set of S, E, I, R, σ, and γ is the same as the first section except that we also explored the model with E at 30 times of I to provide a possible range of number of infections. The absence of fever in COVID-19 cases is more frequent than in SARS-CoV and MERS-CoV infection35. Such patients may be missed since the current surveillance case definition focused mainly on fever detection. Accordingly, the possibility of E at 30 times of I cannot be excluded.\nR0 in this section was chosen by phases. The first phase ranges from 1 December 2019 to 23 January 2020 and can be regarded as the early phase of the epidemic when a few prevention and control measures were implemented. R0 was set as 3.1 consistent with Imai et al.’s9 estimation of high transmission level. On 23 January 2020, airplanes, trains, and other public transportation within the city were restricted and other prevention and control measures such as quarantine and isolation were gradually established in Wuhan20. So, the second phase began on 24 January and Rt was set as 2.6 consistent with Imai et al.’s9 estimation of moderate transmission level. Second February was the last day of the extended Spring Festival holiday and Chinese authorities mobilized more medical resources to support Wuhan ever since36. The newly constructed hospital “Huoshenshan” came into service on this day37 and “Leishenshan,” mobile cabin hospitals several days later38. Also, more and more medical teams arrived in Wuhan. So the third phase began on 3 February and Rt was set as 1.9 consistent with Imai et al.’s9 estimation of low transmission level. All of these measures may need one longest incubation period to take effect. So, the last phase began on 16 February and Rt was set as 0.9 and 0.5, respectively, assuming the prevention and control measures are sufficient and effective to depict two different levels of effect of the measures in reducing transmission probability."}

{"project":"LitCovid-sentences","denotations":[{"id":"T164","span":{"begin":0,"end":92},"obj":"Sentence"},{"id":"T165","span":{"begin":93,"end":194},"obj":"Sentence"},{"id":"T166","span":{"begin":195,"end":375},"obj":"Sentence"},{"id":"T167","span":{"begin":376,"end":474},"obj":"Sentence"},{"id":"T168","span":{"begin":475,"end":584},"obj":"Sentence"},{"id":"T169","span":{"begin":585,"end":655},"obj":"Sentence"},{"id":"T170","span":{"begin":656,"end":696},"obj":"Sentence"},{"id":"T171","span":{"begin":697,"end":875},"obj":"Sentence"},{"id":"T172","span":{"begin":876,"end":963},"obj":"Sentence"},{"id":"T173","span":{"begin":964,"end":1180},"obj":"Sentence"},{"id":"T174","span":{"begin":1181,"end":1317},"obj":"Sentence"},{"id":"T175","span":{"begin":1318,"end":1478},"obj":"Sentence"},{"id":"T176","span":{"begin":1479,"end":1619},"obj":"Sentence"},{"id":"T177","span":{"begin":1620,"end":1671},"obj":"Sentence"},{"id":"T178","span":{"begin":1672,"end":1801},"obj":"Sentence"},{"id":"T179","span":{"begin":1802,"end":1878},"obj":"Sentence"},{"id":"T180","span":{"begin":1879,"end":2132},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Estimation of the epidemic trend assuming the prevention and control measures are sufficient\nThis section discussed the scenario where the current prevention and control measures are sufficient. The set of S, E, I, R, σ, and γ is the same as the first section except that we also explored the model with E at 30 times of I to provide a possible range of number of infections. The absence of fever in COVID-19 cases is more frequent than in SARS-CoV and MERS-CoV infection35. Such patients may be missed since the current surveillance case definition focused mainly on fever detection. Accordingly, the possibility of E at 30 times of I cannot be excluded.\nR0 in this section was chosen by phases. The first phase ranges from 1 December 2019 to 23 January 2020 and can be regarded as the early phase of the epidemic when a few prevention and control measures were implemented. R0 was set as 3.1 consistent with Imai et al.’s9 estimation of high transmission level. On 23 January 2020, airplanes, trains, and other public transportation within the city were restricted and other prevention and control measures such as quarantine and isolation were gradually established in Wuhan20. So, the second phase began on 24 January and Rt was set as 2.6 consistent with Imai et al.’s9 estimation of moderate transmission level. Second February was the last day of the extended Spring Festival holiday and Chinese authorities mobilized more medical resources to support Wuhan ever since36. The newly constructed hospital “Huoshenshan” came into service on this day37 and “Leishenshan,” mobile cabin hospitals several days later38. Also, more and more medical teams arrived in Wuhan. So the third phase began on 3 February and Rt was set as 1.9 consistent with Imai et al.’s9 estimation of low transmission level. All of these measures may need one longest incubation period to take effect. So, the last phase began on 16 February and Rt was set as 0.9 and 0.5, respectively, assuming the prevention and control measures are sufficient and effective to depict two different levels of effect of the measures in reducing transmission probability."}