PMC:7036342 / 9317-9766 JSONTXT

Annnotations TAB JSON ListView MergeView

    LitCovid-PubTator

    {"project":"LitCovid-PubTator","denotations":[{"id":"196","span":{"begin":76,"end":82},"obj":"Gene"},{"id":"197","span":{"begin":162,"end":166},"obj":"Gene"},{"id":"198","span":{"begin":206,"end":212},"obj":"Gene"},{"id":"199","span":{"begin":249,"end":255},"obj":"Gene"},{"id":"200","span":{"begin":332,"end":337},"obj":"Gene"},{"id":"201","span":{"begin":375,"end":380},"obj":"Gene"},{"id":"202","span":{"begin":119,"end":125},"obj":"Gene"},{"id":"203","span":{"begin":293,"end":294},"obj":"Gene"}],"attributes":[{"id":"A196","pred":"tao:has_database_id","subj":"196","obj":"Gene:43740578"},{"id":"A197","pred":"tao:has_database_id","subj":"197","obj":"Gene:55354"},{"id":"A198","pred":"tao:has_database_id","subj":"198","obj":"Gene:43740578"},{"id":"A199","pred":"tao:has_database_id","subj":"199","obj":"Gene:43740578"},{"id":"A200","pred":"tao:has_database_id","subj":"200","obj":"Gene:43740569"},{"id":"A201","pred":"tao:has_database_id","subj":"201","obj":"Gene:43740569"},{"id":"A202","pred":"tao:has_database_id","subj":"202","obj":"Gene:43740578"},{"id":"A203","pred":"tao:has_database_id","subj":"203","obj":"Gene:43740568"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Position Gene Ref Alt Ref AA Alt AA Total depth Ref, % Alt, %\n2971 ORF1ab G T Met Ile 7917 31 69\n6031 ORF1ab C T Asn Asn 7966 5 95\n12115 ORF1ab C T Ser Ser 7875 33 67\n15597 ORF1ab T C Tyr Tyr 7977 4 96\n20936 ORF1ab C T Thr Met 7984 31 69\n22224 S C G Ser Trp 7993 33 67\n25775 ORF3a G T Trp Leu 7995 32 68\n26144 ORF3a G T Gly Val 7885 0 100\n26354 E T A Leu His 7609 36 64"}

    LitCovid-PD-FMA-UBERON

    {"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T59","span":{"begin":10,"end":14},"obj":"Body_part"}],"attributes":[{"id":"A59","pred":"fma_id","subj":"T59","obj":"http://purl.org/sig/ont/fma/fma74402"}],"text":"Position Gene Ref Alt Ref AA Alt AA Total depth Ref, % Alt, %\n2971 ORF1ab G T Met Ile 7917 31 69\n6031 ORF1ab C T Asn Asn 7966 5 95\n12115 ORF1ab C T Ser Ser 7875 33 67\n15597 ORF1ab T C Tyr Tyr 7977 4 96\n20936 ORF1ab C T Thr Met 7984 31 69\n22224 S C G Ser Trp 7993 33 67\n25775 ORF3a G T Trp Leu 7995 32 68\n26144 ORF3a G T Gly Val 7885 0 100\n26354 E T A Leu His 7609 36 64"}

    LitCovid-PD-CLO

    {"project":"LitCovid-PD-CLO","denotations":[{"id":"T96","span":{"begin":10,"end":14},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T97","span":{"begin":30,"end":32},"obj":"http://purl.obolibrary.org/obo/CLO_0001627"},{"id":"T98","span":{"begin":38,"end":40},"obj":"http://purl.obolibrary.org/obo/CLO_0001627"},{"id":"T99","span":{"begin":293,"end":297},"obj":"http://purl.obolibrary.org/obo/CLO_0008954"},{"id":"T100","span":{"begin":393,"end":396},"obj":"http://purl.obolibrary.org/obo/CLO_0037067"},{"id":"T101","span":{"begin":424,"end":425},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T102","span":{"begin":443,"end":445},"obj":"http://purl.obolibrary.org/obo/CLO_0001313"}],"text":"Position Gene Ref Alt Ref AA Alt AA Total depth Ref, % Alt, %\n2971 ORF1ab G T Met Ile 7917 31 69\n6031 ORF1ab C T Asn Asn 7966 5 95\n12115 ORF1ab C T Ser Ser 7875 33 67\n15597 ORF1ab T C Tyr Tyr 7977 4 96\n20936 ORF1ab C T Thr Met 7984 31 69\n22224 S C G Ser Trp 7993 33 67\n25775 ORF3a G T Trp Leu 7995 32 68\n26144 ORF3a G T Gly Val 7885 0 100\n26354 E T A Leu His 7609 36 64"}

    LitCovid-PD-CHEBI

    {"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T51","span":{"begin":21,"end":24},"obj":"Chemical"},{"id":"T52","span":{"begin":30,"end":32},"obj":"Chemical"},{"id":"T54","span":{"begin":34,"end":37},"obj":"Chemical"},{"id":"T55","span":{"begin":38,"end":40},"obj":"Chemical"},{"id":"T57","span":{"begin":63,"end":66},"obj":"Chemical"},{"id":"T58","span":{"begin":90,"end":93},"obj":"Chemical"},{"id":"T61","span":{"begin":95,"end":98},"obj":"Chemical"},{"id":"T63","span":{"begin":133,"end":136},"obj":"Chemical"},{"id":"T66","span":{"begin":138,"end":141},"obj":"Chemical"},{"id":"T69","span":{"begin":176,"end":179},"obj":"Chemical"},{"id":"T71","span":{"begin":181,"end":184},"obj":"Chemical"},{"id":"T73","span":{"begin":220,"end":223},"obj":"Chemical"},{"id":"T76","span":{"begin":225,"end":228},"obj":"Chemical"},{"id":"T79","span":{"begin":263,"end":266},"obj":"Chemical"},{"id":"T81","span":{"begin":268,"end":271},"obj":"Chemical"},{"id":"T84","span":{"begin":302,"end":305},"obj":"Chemical"},{"id":"T86","span":{"begin":307,"end":310},"obj":"Chemical"},{"id":"T89","span":{"begin":345,"end":348},"obj":"Chemical"},{"id":"T92","span":{"begin":350,"end":353},"obj":"Chemical"},{"id":"T95","span":{"begin":388,"end":391},"obj":"Chemical"},{"id":"T96","span":{"begin":393,"end":396},"obj":"Chemical"},{"id":"T98","span":{"begin":427,"end":430},"obj":"Chemical"}],"attributes":[{"id":"A51","pred":"chebi_id","subj":"T51","obj":"http://purl.obolibrary.org/obo/CHEBI_37708"},{"id":"A52","pred":"chebi_id","subj":"T52","obj":"http://purl.obolibrary.org/obo/CHEBI_15843"},{"id":"A53","pred":"chebi_id","subj":"T52","obj":"http://purl.obolibrary.org/obo/CHEBI_72816"},{"id":"A54","pred":"chebi_id","subj":"T54","obj":"http://purl.obolibrary.org/obo/CHEBI_37708"},{"id":"A55","pred":"chebi_id","subj":"T55","obj":"http://purl.obolibrary.org/obo/CHEBI_15843"},{"id":"A56","pred":"chebi_id","subj":"T55","obj":"http://purl.obolibrary.org/obo/CHEBI_72816"},{"id":"A57","pred":"chebi_id","subj":"T57","obj":"http://purl.obolibrary.org/obo/CHEBI_37708"},{"id":"A58","pred":"chebi_id","subj":"T58","obj":"http://purl.obolibrary.org/obo/CHEBI_16044"},{"id":"A59","pred":"chebi_id","subj":"T58","obj":"http://purl.obolibrary.org/obo/CHEBI_16643"},{"id":"A60","pred":"chebi_id","subj":"T58","obj":"http://purl.obolibrary.org/obo/CHEBI_16811"},{"id":"A61","pred":"chebi_id","subj":"T61","obj":"http://purl.obolibrary.org/obo/CHEBI_17191"},{"id":"A62","pred":"chebi_id","subj":"T61","obj":"http://purl.obolibrary.org/obo/CHEBI_30009"},{"id":"A63","pred":"chebi_id","subj":"T63","obj":"http://purl.obolibrary.org/obo/CHEBI_17196"},{"id":"A64","pred":"chebi_id","subj":"T63","obj":"http://purl.obolibrary.org/obo/CHEBI_22653"},{"id":"A65","pred":"chebi_id","subj":"T63","obj":"http://purl.obolibrary.org/obo/CHEBI_50347"},{"id":"A66","pred":"chebi_id","subj":"T66","obj":"http://purl.obolibrary.org/obo/CHEBI_17196"},{"id":"A67","pred":"chebi_id","subj":"T66","obj":"http://purl.obolibrary.org/obo/CHEBI_22653"},{"id":"A68","pred":"chebi_id","subj":"T66","obj":"http://purl.obolibrary.org/obo/CHEBI_50347"},{"id":"A69","pred":"chebi_id","subj":"T69","obj":"http://purl.obolibrary.org/obo/CHEBI_17115"},{"id":"A70","pred":"chebi_id","subj":"T69","obj":"http://purl.obolibrary.org/obo/CHEBI_29999"},{"id":"A71","pred":"chebi_id","subj":"T71","obj":"http://purl.obolibrary.org/obo/CHEBI_17115"},{"id":"A72","pred":"chebi_id","subj":"T71","obj":"http://purl.obolibrary.org/obo/CHEBI_29999"},{"id":"A73","pred":"chebi_id","subj":"T73","obj":"http://purl.obolibrary.org/obo/CHEBI_17895"},{"id":"A74","pred":"chebi_id","subj":"T73","obj":"http://purl.obolibrary.org/obo/CHEBI_18186"},{"id":"A75","pred":"chebi_id","subj":"T73","obj":"http://purl.obolibrary.org/obo/CHEBI_46858"},{"id":"A76","pred":"chebi_id","subj":"T76","obj":"http://purl.obolibrary.org/obo/CHEBI_17895"},{"id":"A77","pred":"chebi_id","subj":"T76","obj":"http://purl.obolibrary.org/obo/CHEBI_18186"},{"id":"A78","pred":"chebi_id","subj":"T76","obj":"http://purl.obolibrary.org/obo/CHEBI_46858"},{"id":"A79","pred":"chebi_id","subj":"T79","obj":"http://purl.obolibrary.org/obo/CHEBI_16857"},{"id":"A80","pred":"chebi_id","subj":"T79","obj":"http://purl.obolibrary.org/obo/CHEBI_30013"},{"id":"A81","pred":"chebi_id","subj":"T81","obj":"http://purl.obolibrary.org/obo/CHEBI_16044"},{"id":"A82","pred":"chebi_id","subj":"T81","obj":"http://purl.obolibrary.org/obo/CHEBI_16643"},{"id":"A83","pred":"chebi_id","subj":"T81","obj":"http://purl.obolibrary.org/obo/CHEBI_16811"},{"id":"A84","pred":"chebi_id","subj":"T84","obj":"http://purl.obolibrary.org/obo/CHEBI_17115"},{"id":"A85","pred":"chebi_id","subj":"T84","obj":"http://purl.obolibrary.org/obo/CHEBI_29999"},{"id":"A86","pred":"chebi_id","subj":"T86","obj":"http://purl.obolibrary.org/obo/CHEBI_16828"},{"id":"A87","pred":"chebi_id","subj":"T86","obj":"http://purl.obolibrary.org/obo/CHEBI_27897"},{"id":"A88","pred":"chebi_id","subj":"T86","obj":"http://purl.obolibrary.org/obo/CHEBI_29954"},{"id":"A89","pred":"chebi_id","subj":"T89","obj":"http://purl.obolibrary.org/obo/CHEBI_16828"},{"id":"A90","pred":"chebi_id","subj":"T89","obj":"http://purl.obolibrary.org/obo/CHEBI_27897"},{"id":"A91","pred":"chebi_id","subj":"T89","obj":"http://purl.obolibrary.org/obo/CHEBI_29954"},{"id":"A92","pred":"chebi_id","subj":"T92","obj":"http://purl.obolibrary.org/obo/CHEBI_15603"},{"id":"A93","pred":"chebi_id","subj":"T92","obj":"http://purl.obolibrary.org/obo/CHEBI_25017"},{"id":"A94","pred":"chebi_id","subj":"T92","obj":"http://purl.obolibrary.org/obo/CHEBI_30006"},{"id":"A95","pred":"chebi_id","subj":"T95","obj":"http://purl.obolibrary.org/obo/CHEBI_15428"},{"id":"A96","pred":"chebi_id","subj":"T96","obj":"http://purl.obolibrary.org/obo/CHEBI_16414"},{"id":"A97","pred":"chebi_id","subj":"T96","obj":"http://purl.obolibrary.org/obo/CHEBI_30015"},{"id":"A98","pred":"chebi_id","subj":"T98","obj":"http://purl.obolibrary.org/obo/CHEBI_15603"},{"id":"A99","pred":"chebi_id","subj":"T98","obj":"http://purl.obolibrary.org/obo/CHEBI_25017"},{"id":"A100","pred":"chebi_id","subj":"T98","obj":"http://purl.obolibrary.org/obo/CHEBI_30006"}],"text":"Position Gene Ref Alt Ref AA Alt AA Total depth Ref, % Alt, %\n2971 ORF1ab G T Met Ile 7917 31 69\n6031 ORF1ab C T Asn Asn 7966 5 95\n12115 ORF1ab C T Ser Ser 7875 33 67\n15597 ORF1ab T C Tyr Tyr 7977 4 96\n20936 ORF1ab C T Thr Met 7984 31 69\n22224 S C G Ser Trp 7993 33 67\n25775 ORF3a G T Trp Leu 7995 32 68\n26144 ORF3a G T Gly Val 7885 0 100\n26354 E T A Leu His 7609 36 64"}

    LitCovid-sentences

    {"project":"LitCovid-sentences","denotations":[{"id":"T68","span":{"begin":0,"end":69},"obj":"Sentence"},{"id":"T69","span":{"begin":70,"end":112},"obj":"Sentence"},{"id":"T70","span":{"begin":113,"end":154},"obj":"Sentence"},{"id":"T71","span":{"begin":155,"end":198},"obj":"Sentence"},{"id":"T72","span":{"begin":199,"end":241},"obj":"Sentence"},{"id":"T73","span":{"begin":242,"end":285},"obj":"Sentence"},{"id":"T74","span":{"begin":286,"end":324},"obj":"Sentence"},{"id":"T75","span":{"begin":325,"end":367},"obj":"Sentence"},{"id":"T76","span":{"begin":368,"end":410},"obj":"Sentence"},{"id":"T77","span":{"begin":411,"end":449},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Position Gene Ref Alt Ref AA Alt AA Total depth Ref, % Alt, %\n2971 ORF1ab G T Met Ile 7917 31 69\n6031 ORF1ab C T Asn Asn 7966 5 95\n12115 ORF1ab C T Ser Ser 7875 33 67\n15597 ORF1ab T C Tyr Tyr 7977 4 96\n20936 ORF1ab C T Thr Met 7984 31 69\n22224 S C G Ser Trp 7993 33 67\n25775 ORF3a G T Trp Leu 7995 32 68\n26144 ORF3a G T Gly Val 7885 0 100\n26354 E T A Leu His 7609 36 64"}