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PMC:7036342 / 9317-9766 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
196 76-82 Gene denotes ORF1ab Gene:43740578
197 162-166 Gene denotes ORF1 Gene:55354
198 206-212 Gene denotes ORF1ab Gene:43740578
199 249-255 Gene denotes ORF1ab Gene:43740578
200 332-337 Gene denotes ORF3a Gene:43740569
201 375-380 Gene denotes ORF3a Gene:43740569
202 119-125 Gene denotes ORF1ab Gene:43740578
203 293-294 Gene denotes S Gene:43740568

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T59 10-14 Body_part denotes Gene http://purl.org/sig/ont/fma/fma74402

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T96 10-14 http://purl.obolibrary.org/obo/OGG_0000000002 denotes Gene
T97 30-32 http://purl.obolibrary.org/obo/CLO_0001627 denotes AA
T98 38-40 http://purl.obolibrary.org/obo/CLO_0001627 denotes AA
T99 293-297 http://purl.obolibrary.org/obo/CLO_0008954 denotes S C
T100 393-396 http://purl.obolibrary.org/obo/CLO_0037067 denotes Val
T101 424-425 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T102 443-445 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T51 21-24 Chemical denotes Alt http://purl.obolibrary.org/obo/CHEBI_37708
T52 30-32 Chemical denotes AA http://purl.obolibrary.org/obo/CHEBI_15843|http://purl.obolibrary.org/obo/CHEBI_72816
T54 34-37 Chemical denotes Alt http://purl.obolibrary.org/obo/CHEBI_37708
T55 38-40 Chemical denotes AA http://purl.obolibrary.org/obo/CHEBI_15843|http://purl.obolibrary.org/obo/CHEBI_72816
T57 63-66 Chemical denotes Alt http://purl.obolibrary.org/obo/CHEBI_37708
T58 90-93 Chemical denotes Met http://purl.obolibrary.org/obo/CHEBI_16044|http://purl.obolibrary.org/obo/CHEBI_16643|http://purl.obolibrary.org/obo/CHEBI_16811
T61 95-98 Chemical denotes Ile http://purl.obolibrary.org/obo/CHEBI_17191|http://purl.obolibrary.org/obo/CHEBI_30009
T63 133-136 Chemical denotes Asn http://purl.obolibrary.org/obo/CHEBI_17196|http://purl.obolibrary.org/obo/CHEBI_22653|http://purl.obolibrary.org/obo/CHEBI_50347
T66 138-141 Chemical denotes Asn http://purl.obolibrary.org/obo/CHEBI_17196|http://purl.obolibrary.org/obo/CHEBI_22653|http://purl.obolibrary.org/obo/CHEBI_50347
T69 176-179 Chemical denotes Ser http://purl.obolibrary.org/obo/CHEBI_17115|http://purl.obolibrary.org/obo/CHEBI_29999
T71 181-184 Chemical denotes Ser http://purl.obolibrary.org/obo/CHEBI_17115|http://purl.obolibrary.org/obo/CHEBI_29999
T73 220-223 Chemical denotes Tyr http://purl.obolibrary.org/obo/CHEBI_17895|http://purl.obolibrary.org/obo/CHEBI_18186|http://purl.obolibrary.org/obo/CHEBI_46858
T76 225-228 Chemical denotes Tyr http://purl.obolibrary.org/obo/CHEBI_17895|http://purl.obolibrary.org/obo/CHEBI_18186|http://purl.obolibrary.org/obo/CHEBI_46858
T79 263-266 Chemical denotes Thr http://purl.obolibrary.org/obo/CHEBI_16857|http://purl.obolibrary.org/obo/CHEBI_30013
T81 268-271 Chemical denotes Met http://purl.obolibrary.org/obo/CHEBI_16044|http://purl.obolibrary.org/obo/CHEBI_16643|http://purl.obolibrary.org/obo/CHEBI_16811
T84 302-305 Chemical denotes Ser http://purl.obolibrary.org/obo/CHEBI_17115|http://purl.obolibrary.org/obo/CHEBI_29999
T86 307-310 Chemical denotes Trp http://purl.obolibrary.org/obo/CHEBI_16828|http://purl.obolibrary.org/obo/CHEBI_27897|http://purl.obolibrary.org/obo/CHEBI_29954
T89 345-348 Chemical denotes Trp http://purl.obolibrary.org/obo/CHEBI_16828|http://purl.obolibrary.org/obo/CHEBI_27897|http://purl.obolibrary.org/obo/CHEBI_29954
T92 350-353 Chemical denotes Leu http://purl.obolibrary.org/obo/CHEBI_15603|http://purl.obolibrary.org/obo/CHEBI_25017|http://purl.obolibrary.org/obo/CHEBI_30006
T95 388-391 Chemical denotes Gly http://purl.obolibrary.org/obo/CHEBI_15428
T96 393-396 Chemical denotes Val http://purl.obolibrary.org/obo/CHEBI_16414|http://purl.obolibrary.org/obo/CHEBI_30015
T98 427-430 Chemical denotes Leu http://purl.obolibrary.org/obo/CHEBI_15603|http://purl.obolibrary.org/obo/CHEBI_25017|http://purl.obolibrary.org/obo/CHEBI_30006

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T68 0-69 Sentence denotes Position Gene Ref Alt Ref AA Alt AA Total depth Ref, % Alt, %
T69 70-112 Sentence denotes 2971 ORF1ab G T Met Ile 7917 31 69
T70 113-154 Sentence denotes 6031 ORF1ab C T Asn Asn 7966 5 95
T71 155-198 Sentence denotes 12115 ORF1ab C T Ser Ser 7875 33 67
T72 199-241 Sentence denotes 15597 ORF1ab T C Tyr Tyr 7977 4 96
T73 242-285 Sentence denotes 20936 ORF1ab C T Thr Met 7984 31 69
T74 286-324 Sentence denotes 22224 S C G Ser Trp 7993 33 67
T75 325-367 Sentence denotes 25775 ORF3a G T Trp Leu 7995 32 68
T76 368-410 Sentence denotes 26144 ORF3a G T Gly Val 7885 0 100
T77 411-449 Sentence denotes 26354 E T A Leu His 7609 36 64