PMC:7036342 / 3069-4007 JSONTXT

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{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7036342","sourcedb":"PMC","sourceid":"7036342","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7036342","text":"The patient's oropharyngeal samples were obtained by using UTM™ kit containing 1 mL of viral transport media (Copan Diagnostics Inc., Murrieta, CA, USA) on day 7 of her illness. We inoculated monolayers of Vero cells (ATCC ® CCL-81™) with the samples and cultured the cells at 37°C in a 5% carbon dioxide atmosphere. Until 5 days after inoculation, cytopathic effects were not distinct, which is compatible with the previous findings that no specific cytopathic effects were observed in the Vero E6 cells until 6 days after inoculation in the report about first isolation of SARS-CoV-2.3 Five days after inoculation, we did blind passage of culture supernatant into T-25 culture flask (ThermoFisher Scientific Inc., Waltham, MA, USA) with monolayers of Vero cells, and cytopathic effects consisting of rounding and detachment of cells were observed in the whole area of the T-25 flask 3 days after the first blind passage (Fig. 1A and B).","tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"96","span":{"begin":4,"end":11},"obj":"Species"},{"id":"97","span":{"begin":575,"end":585},"obj":"Species"},{"id":"98","span":{"begin":225,"end":231},"obj":"Chemical"},{"id":"99","span":{"begin":290,"end":304},"obj":"Chemical"}],"attributes":[{"id":"A96","pred":"tao:has_database_id","subj":"96","obj":"Tax:9606"},{"id":"A97","pred":"tao:has_database_id","subj":"97","obj":"Tax:2697049"},{"id":"A99","pred":"tao:has_database_id","subj":"99","obj":"MESH:D002245"},{"subj":"96","pred":"source","obj":"LitCovid-PubTator"},{"subj":"97","pred":"source","obj":"LitCovid-PubTator"},{"subj":"98","pred":"source","obj":"LitCovid-PubTator"},{"subj":"99","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T124","span":{"begin":14,"end":27},"obj":"UBERON:0001179"},{"id":"T123","span":{"begin":87,"end":92},"obj":"NCBITaxon:10239"},{"id":"T122","span":{"begin":206,"end":210},"obj":"CL_6"},{"id":"T121","span":{"begin":297,"end":304},"obj":"CHEBI:16526;CHEBI:16526"},{"id":"T120","span":{"begin":491,"end":495},"obj":"CL_6"},{"id":"T119","span":{"begin":575,"end":585},"obj":"SP_7"},{"id":"T118","span":{"begin":753,"end":757},"obj":"CL_6"}],"attributes":[{"subj":"T124","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T123","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T122","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T121","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T120","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T119","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T118","pred":"source","obj":"LitCovid-PMC-OGER-BB"}]},{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T16","span":{"begin":211,"end":216},"obj":"Body_part"},{"id":"T17","span":{"begin":268,"end":273},"obj":"Body_part"},{"id":"T18","span":{"begin":499,"end":504},"obj":"Body_part"},{"id":"T19","span":{"begin":758,"end":763},"obj":"Body_part"},{"id":"T20","span":{"begin":829,"end":834},"obj":"Body_part"}],"attributes":[{"id":"A16","pred":"fma_id","subj":"T16","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A17","pred":"fma_id","subj":"T17","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A18","pred":"fma_id","subj":"T18","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A19","pred":"fma_id","subj":"T19","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A20","pred":"fma_id","subj":"T20","obj":"http://purl.org/sig/ont/fma/fma68646"},{"subj":"T16","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T17","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T18","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T19","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T20","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T35","span":{"begin":575,"end":583},"obj":"Disease"},{"id":"T36","span":{"begin":575,"end":579},"obj":"Disease"}],"attributes":[{"id":"A35","pred":"mondo_id","subj":"T35","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A36","pred":"mondo_id","subj":"T36","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T35","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T36","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T33","span":{"begin":206,"end":210},"obj":"http://purl.obolibrary.org/obo/CLO_0009524"},{"id":"T34","span":{"begin":206,"end":210},"obj":"http://purl.obolibrary.org/obo/CLO_0050515"},{"id":"T35","span":{"begin":211,"end":216},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T36","span":{"begin":255,"end":273},"obj":"http://purl.obolibrary.org/obo/CL_0000010"},{"id":"T37","span":{"begin":285,"end":286},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T38","span":{"begin":491,"end":504},"obj":"http://purl.obolibrary.org/obo/CLO_0051719"},{"id":"T39","span":{"begin":753,"end":757},"obj":"http://purl.obolibrary.org/obo/CLO_0009524"},{"id":"T40","span":{"begin":753,"end":757},"obj":"http://purl.obolibrary.org/obo/CLO_0050515"},{"id":"T41","span":{"begin":758,"end":763},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T42","span":{"begin":829,"end":834},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T43","span":{"begin":935,"end":936},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"}],"attributes":[{"subj":"T33","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T34","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T35","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T36","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T37","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T38","pred":"source","obj":"LitCovid-PD-CLO"},{"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