PMC:7036338 / 10223-11701
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 157 | 70-78 | Species | denotes | patients | Tax:9606 |
| 158 | 127-135 | Species | denotes | patients | Tax:9606 |
| 159 | 252-260 | Species | denotes | patients | Tax:9606 |
| 160 | 534-544 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 161 | 618-626 | Species | denotes | patients | Tax:9606 |
| 162 | 1292-1300 | Species | denotes | patients | Tax:9606 |
| 163 | 1394-1402 | Species | denotes | patients | Tax:9606 |
| 164 | 215-234 | Chemical | denotes | Lopinavir/ritonavir | MESH:C558899 |
| 165 | 417-436 | Chemical | denotes | Lopinavir/ritonavir | MESH:C558899 |
| 166 | 458-466 | Disease | denotes | diarrhea | MESH:D003967 |
| 167 | 1272-1291 | Disease | denotes | SARS-CoV-2 infected | MESH:C000657245 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T74 | 480-502 | Body_part | denotes | gastrointestinal tract | http://purl.org/sig/ont/fma/fma71132 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T37 | 458-466 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T38 | 534-542 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T39 | 1021-1031 | Disease | denotes | infectious | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T40 | 1272-1280 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T51 | 480-502 | http://purl.obolibrary.org/obo/UBERON_0005409 | denotes | gastrointestinal tract |
| T52 | 643-648 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T53 | 683-688 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T54 | 779-784 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T55 | 867-872 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T56 | 873-876 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T57 | 1005-1010 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T58 | 1092-1097 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T59 | 1139-1144 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T60 | 1164-1165 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T61 | 1472-1477 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T9 | 215-224 | Chemical | denotes | Lopinavir | http://purl.obolibrary.org/obo/CHEBI_31781 |
| T10 | 225-234 | Chemical | denotes | ritonavir | http://purl.obolibrary.org/obo/CHEBI_45409 |
| T11 | 417-426 | Chemical | denotes | Lopinavir | http://purl.obolibrary.org/obo/CHEBI_31781 |
| T12 | 427-436 | Chemical | denotes | ritonavir | http://purl.obolibrary.org/obo/CHEBI_45409 |
| T13 | 548-552 | Chemical | denotes | drug | http://purl.obolibrary.org/obo/CHEBI_23888 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 712-722 | http://purl.obolibrary.org/obo/GO_0046903 | denotes | secretions |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T70 | 0-41 | Sentence | denotes | There are also limitations in our report. |
| T71 | 42-206 | Sentence | denotes | Since we only presented two patients (mild and moderate), the information from these patients may not be generalizable to many other cases, especially severe cases. |
| T72 | 207-383 | Sentence | denotes | Second, Lopinavir/ritonavir was used in both patients on day 5 and day 17 from symptom onset, but its role cannot be determined in viral load reduction or clinical improvement. |
| T73 | 384-565 | Sentence | denotes | In addition, since they received Lopinavir/ritonavir which can also cause diarrhea, how much of gastrointestinal tract symptom was in fact related to SARS-CoV-2 or drug side effect. |
| T74 | 566-723 | Sentence | denotes | Third, we cannot estimate the time point when these patients were exposed to virus and when they started to shed the virus from their respiratory secretions. |
| T75 | 724-853 | Sentence | denotes | These data are also urgently needed to understand this virus better and to implement the control strategies as early as possible. |
| T76 | 854-959 | Sentence | denotes | Finally, the virus has not been readily cultured from these specimens, yet, although we are still trying. |
| T77 | 960-1115 | Sentence | denotes | It is not clear whether there was not viable virus (possibly infectious) or we were not successful to culture this newly discovered virus in the beginning. |
| T78 | 1116-1217 | Sentence | denotes | Therefore, knowing the virus load that can give a positive culture result is important in the future. |
| T79 | 1218-1324 | Sentence | denotes | There is scarce information on viral load kinetics in SARS-CoV-2 infected patients throughout the illness. |
| T80 | 1325-1478 | Sentence | denotes | Therefore, although our report is based on observation from only two patients, this will provide valuable insight to understand the nature of this virus. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T18 | 458-466 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |