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PMC:7033720 / 14028-16434 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
234 1124-1130 Species denotes b A 15 Tax:447219
235 1333-1339 Species denotes b A 20 Tax:447224
236 195-200 CellLine denotes WHU01 CVCL:9726
237 257-262 CellLine denotes WHU01 CVCL:9726
238 323-328 CellLine denotes WHU01 CVCL:9726
239 387-392 CellLine denotes WHU01 CVCL:9726
240 451-456 CellLine denotes WHU01 CVCL:9726
241 514-519 CellLine denotes WHU01 CVCL:9726
242 578-583 CellLine denotes WHU01 CVCL:9726
243 642-647 CellLine denotes WHU01 CVCL:9726
244 705-710 CellLine denotes WHU01 CVCL:9726
245 770-775 CellLine denotes WHU01 CVCL:9726
246 833-838 CellLine denotes WHU01 CVCL:9726
247 896-901 CellLine denotes WHU01 CVCL:9726
248 978-983 CellLine denotes WHU01 CVCL:9726
249 1046-1051 CellLine denotes WHU01 CVCL:9726
250 1117-1122 CellLine denotes WHU01 CVCL:9726
251 1186-1191 CellLine denotes WHU01 CVCL:9726
252 1256-1261 CellLine denotes WHU01 CVCL:9726
253 1311-1331 CellLine denotes 19.10 1.90E-47 WHU01 CVCL:6820
254 1395-1400 CellLine denotes WHU01 CVCL:9726
255 1462-1467 CellLine denotes WHU01 CVCL:9726
256 1530-1535 CellLine denotes WHU01 CVCL:9726
257 1593-1598 CellLine denotes WHU01 CVCL:9726
259 50-55 CellLine denotes WHU01 CVCL:9726

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T71 15-25 Body_part denotes nucleotide http://purl.org/sig/ont/fma/fma82740
T72 66-73 Body_part denotes genomes http://purl.org/sig/ont/fma/fma84116

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T114 210-215 http://purl.obolibrary.org/obo/CLO_0001012 denotes 221 1
T115 222-224 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T116 266-267 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T117 284-285 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T118 332-333 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T119 350-351 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T120 384-386 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T121 410-411 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T122 460-462 http://purl.obolibrary.org/obo/CLO_0009421 denotes TT
T123 460-462 http://purl.obolibrary.org/obo/CLO_0052184 denotes TT
T124 460-462 http://purl.obolibrary.org/obo/CLO_0052185 denotes TT
T125 475-477 http://purl.obolibrary.org/obo/CLO_0001627 denotes AA
T126 480-482 http://purl.obolibrary.org/obo/CLO_0009421 denotes TT
T127 480-482 http://purl.obolibrary.org/obo/CLO_0052184 denotes TT
T128 480-482 http://purl.obolibrary.org/obo/CLO_0052185 denotes TT
T129 665-666 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T130 714-715 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T131 732-733 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T132 793-794 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T133 1055-1057 http://purl.obolibrary.org/obo/CLO_0009421 denotes TT
T134 1055-1057 http://purl.obolibrary.org/obo/CLO_0052184 denotes TT
T135 1055-1057 http://purl.obolibrary.org/obo/CLO_0052185 denotes TT
T136 1074-1076 http://purl.obolibrary.org/obo/CLO_0001627 denotes AA
T137 1079-1081 http://purl.obolibrary.org/obo/CLO_0009421 denotes TT
T138 1079-1081 http://purl.obolibrary.org/obo/CLO_0052184 denotes TT
T139 1079-1081 http://purl.obolibrary.org/obo/CLO_0052185 denotes TT
T140 1126-1127 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T141 1148-1149 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T142 1213-1214 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T143 1335-1336 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T144 1357-1358 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T145 1403-1404 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T146 1425-1426 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T147 1470-1471 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T148 1492-1496 http://purl.obolibrary.org/obo/CLO_0001599 denotes A 54
T149 1536-1539 http://purl.obolibrary.org/obo/CLO_0008954 denotes S C
T150 1556-1557 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T151 1609-1610 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T152 1631-1632 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T153 1741-1742 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T154 1759-1760 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T155 1807-1808 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T156 1825-1826 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T157 1859-1861 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T158 1886-1891 http://purl.obolibrary.org/obo/CLO_0002087 denotes C 129
T159 1925-1926 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T160 1947-1948 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T161 2013-2014 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T162 2153-2154 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T163 2159-2162 http://purl.obolibrary.org/obo/CLO_0001311 denotes 356
T164 2273-2274 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T165 2295-2296 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T166 2349-2350 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T167 2371-2372 http://purl.obolibrary.org/obo/CLO_0001020 denotes A

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T34 15-25 Chemical denotes nucleotide http://purl.obolibrary.org/obo/CHEBI_36976
T35 460-462 Chemical denotes TT http://purl.obolibrary.org/obo/CHEBI_73665
T36 475-477 Chemical denotes AA http://purl.obolibrary.org/obo/CHEBI_15843|http://purl.obolibrary.org/obo/CHEBI_72816
T38 480-482 Chemical denotes TT http://purl.obolibrary.org/obo/CHEBI_73665
T39 1055-1057 Chemical denotes TT http://purl.obolibrary.org/obo/CHEBI_73665
T40 1074-1076 Chemical denotes AA http://purl.obolibrary.org/obo/CHEBI_15843|http://purl.obolibrary.org/obo/CHEBI_72816
T42 1079-1081 Chemical denotes TT http://purl.obolibrary.org/obo/CHEBI_73665

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T126 0-8 Sentence denotes Table 2.
T127 9-74 Sentence denotes Minor nucleotide variant identified from WHU01 and WHU02 genomes.
T128 75-194 Sentence denotes Strain Region Variant Start Poisiton End Position Length Change Coverage Polymorphism Type VariantFrequency (%) P-value
T129 195-256 Sentence denotes WHU01 1a T 221 221 1 C → T 27 SNP (transition) 14.80 6.70E-07
T130 257-322 Sentence denotes WHU01 1a A 1103 1103 1 T → A 119 SNP (transversion) 5.00 5.40E-14
T131 323-386 Sentence denotes WHU01 1a A 1820 1820 1 G → A 97 SNP (transition) 11.30 2.00E-27
T132 387-450 Sentence denotes WHU01 1a G 3916 3916 1 A → G 113 SNP (transition) 5.30 3.90E-14
T133 451-513 Sentence denotes WHU01 1a TT 3919 3920 2 AA → TT 110 Substitution 5.50 1.30E-13
T134 514-577 Sentence denotes WHU01 1a T 3923 3923 1 C → T 108 SNP (transition) 5.60 3.00E-14
T135 578-641 Sentence denotes WHU01 1a T 5701 5701 1 C → T 247 SNP (transition) 5.30 5.70E-29
T136 642-704 Sentence denotes WHU01 1a G 8892 8892 1 A → G 69 SNP (transition) 5.80 5.40E-10
T137 705-769 Sentence denotes WHU01 1a A 8895 8895 1 T → A 65 SNP (transversion) 6.20 4.20E-10
T138 770-832 Sentence denotes WHU01 1a G 8975 8975 1 A → G 59 SNP (transition) 5.10 6.50E-08
T139 833-895 Sentence denotes WHU01 1a C 9114 9114 1 T → C 43 SNP (transition) 7.00 7.70E-07
T140 896-977 Sentence denotes WHU01 1a   11,081 11,081 1 (T)8 → (T)7 78 Deletion (tandem repeat) 12.80 1.20E-20
T141 978-1045 Sentence denotes WHU01 1a C 13,074 13,074 1 T → C 110 SNP (transition) 5.50 3.30E-14
T142 1046-1116 Sentence denotes WHU01 1a TT 13,282 13,283 2 AA → TT 78 → 79 Substitution 5.10 9.40E-10
T143 1117-1185 Sentence denotes WHU01 1b A 15,079 15,079 1 C → A 57 SNP (transversion) 8.80 1.30E-13
T144 1186-1255 Sentence denotes WHU01 1b T 18,252 18,252 1 A → T 192 SNP (transversion) 6.30 5.50E-23
T145 1256-1325 Sentence denotes WHU01 1b T 19,163 19,163 1 C → → T 89 SNP (transition) 19.10 1.90E-47
T146 1326-1394 Sentence denotes WHU01 1b A 20,234 20,234 1 C → A 67 SNP (transversion) 6.00 1.20E-09
T147 1395-1461 Sentence denotes WHU01 S A 22,315 22,315 1 G → A 182 SNP (transition) 6.60 4.70E-28
T148 1462-1529 Sentence denotes WHU01 S A 22,447 22,447 1 C → A 54 SNP (transversion) 5.60 2.00E-07
T149 1530-1592 Sentence denotes WHU01 S C 24,322 24,322 1 A → C 325 SNP (transversion) 38.50 0
T150 1593-1667 Sentence denotes WHU01 Other ORF A 26,313 26,313 1 G → A 29 SNP (transition) 10.30 1.50E-08
T151 1668-1731 Sentence denotes WHU02 1a T 1100 1100 1 C → T 390 SNP (transition) 6.70 1.50E-56
T152 1732-1797 Sentence denotes WHU02 1a A 1103 1103 1 T → A 391 SNP (transversion) 5.90 3.10E-51
T153 1798-1861 Sentence denotes WHU02 1a A 1820 1820 1 G → A 382 SNP (transition) 5.20 1.00E-41
T154 1862-1915 Sentence denotes WHU02 1a C 6823 6822 0 +C 129 Insertion 5.40 2.50E-16
T155 1916-1985 Sentence denotes WHU02 1a A 10,778 10,778 1 T → A 323 SNP (transversion) 5.30 2.40E-32
T156 1986-2055 Sentence denotes WHU02 1a T 11,366 11,366 1 A → T 250 SNP (transversion) 6.00 4.40E-31
T157 2056-2125 Sentence denotes WHU02 1a T 11,562 11,562 1 C → T 397 SNP (transition) 13.60 1.30E-138
T158 2126-2195 Sentence denotes WHU02 1b T 13,692 13,692 1 A → T 356 SNP (transversion) 7.00 1.60E-57
T159 2196-2263 Sentence denotes WHU02 1b C 14,306 14,306 1 T → C 279 SNP (transition) 7.90 9.20E-50
T160 2264-2332 Sentence denotes WHU02 1b A 14,315 14,315 1 G → A 244 SNP (transition) 10.70 6.90E-57
T161 2333-2406 Sentence denotes WHU02 Other ORF A 26,504 26,504 1 G → A 63 SNP (transition) 6.30 1.50E-10