PMC:7029452 / 11955-12891
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 194 | 779-783 | Gene | denotes | RdRp | Gene:43740578 |
| 195 | 695-708 | Gene | denotes | Cases 2 and 3 | |
| 196 | 845-849 | Gene | denotes | RdRp | Gene:43740578 |
| 197 | 596-606 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 198 | 800-809 | Species | denotes | 2019-nCov | Tax:2697049 |
| 199 | 128-133 | Disease | denotes | fever | MESH:D005334 |
| 200 | 143-150 | Disease | denotes | fatigue | MESH:D005221 |
| 201 | 152-166 | Disease | denotes | conjunctivitis | MESH:D003231 |
| 202 | 171-176 | Disease | denotes | cough | MESH:D003371 |
| 203 | 281-286 | Disease | denotes | fever | MESH:D005334 |
| 204 | 296-303 | Disease | denotes | fatigue | MESH:D005221 |
| 205 | 308-313 | Disease | denotes | cough | MESH:D003371 |
| 206 | 571-579 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 207 | 581-590 | Disease | denotes | Infection | MESH:D007239 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T11 | 924-928 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T67 | 152-166 | Disease | denotes | conjunctivitis | http://purl.obolibrary.org/obo/MONDO_0003799 |
| T68 | 571-579 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T69 | 581-590 | Disease | denotes | Infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T70 | 596-604 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T71 | 596-600 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T86 | 11-12 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T87 | 33-37 | http://purl.obolibrary.org/obo/UBERON_0003101 | denotes | male |
| T88 | 33-37 | http://www.ebi.ac.uk/efo/EFO_0000970 | denotes | male |
| T89 | 68-70 | http://purl.obolibrary.org/obo/CLO_0050510 | denotes | 18 |
| T90 | 203-204 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T91 | 225-231 | http://purl.obolibrary.org/obo/UBERON_0003100 | denotes | female |
| T92 | 488-489 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T93 | 784-787 | http://purl.obolibrary.org/obo/NCBITaxon_9596 | denotes | Pan |
| T94 | 818-822 | http://purl.obolibrary.org/obo/CLO_0037161 | denotes | E; N |
| T95 | 924-928 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T10 | 33-37 | Chemical | denotes | male | http://purl.obolibrary.org/obo/CHEBI_30780 |
| T11 | 850-852 | Chemical | denotes | IP | http://purl.obolibrary.org/obo/CHEBI_74076 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T13 | 128-133 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T14 | 135-141 | Phenotype | denotes | chills | http://purl.obolibrary.org/obo/HP_0025143 |
| T15 | 143-150 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T16 | 152-166 | Phenotype | denotes | conjunctivitis | http://purl.obolibrary.org/obo/HP_0000509 |
| T17 | 171-176 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T18 | 281-286 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T19 | 288-294 | Phenotype | denotes | chills | http://purl.obolibrary.org/obo/HP_0025143 |
| T20 | 296-303 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T21 | 308-313 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T83 | 0-114 | Sentence | denotes | Case 2 was a 31-year-old Chinese male tourist who had left Wuhan on 18 January and arrived in Paris on 19 January. |
| T84 | 115-191 | Sentence | denotes | He developed fever, chills, fatigue, conjunctivitis and cough on 19 January. |
| T85 | 192-266 | Sentence | denotes | Case 3 was a 30-year-old Chinese female tourist who travelled with Case 2. |
| T86 | 267-328 | Sentence | denotes | She developed fever, chills, fatigue and cough on 23 January. |
| T87 | 329-580 | Sentence | denotes | On 24 January, they were advised by the Chinese embassy to seek medical attention at the national hotline (SAMU-centre 15) and were immediately transferred to a regional referring hospital, isolated and sampled for laboratory confirmation of COVID-19. |
| T88 | 581-694 | Sentence | denotes | Infection with SARS-CoV-2 was confirmed on 24 January for both of them by the National Reference Centre (Figure). |
| T89 | 695-936 | Sentence | denotes | Cases 2 and 3 were positive by RT-PCR for all targets of the Charité procedure [4] (RdRp Pan Sarbeco and 2019-nCov probes; E; N) as well for the four RdRp-IP targets with Ct values in good agreement with those obtained for the E gene target. |