PMC:7019868 / 1663-3217
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 60 | 0-31 | Species | denotes | Porcine epidemic diarrhea virus | Tax:28295 |
| 61 | 33-37 | Species | denotes | PEDV | Tax:28295 |
| 62 | 142-146 | Species | denotes | PEDV | Tax:28295 |
| 63 | 244-249 | Species | denotes | swine | Tax:9823 |
| 64 | 657-661 | Species | denotes | PEDV | Tax:28295 |
| 65 | 741-745 | Species | denotes | PEDV | Tax:28295 |
| 66 | 909-913 | Species | denotes | PEDV | Tax:28295 |
| 67 | 1042-1047 | Species | denotes | swine | Tax:9823 |
| 68 | 1119-1123 | Species | denotes | PEDV | Tax:28295 |
| 69 | 1210-1214 | Species | denotes | PEDV | Tax:28295 |
| 70 | 1306-1310 | Species | denotes | PEDV | Tax:28295 |
| 71 | 1506-1510 | Species | denotes | PEDV | Tax:28295 |
| 72 | 173-180 | Species | denotes | porcine | Tax:1586324 |
| 73 | 181-198 | Disease | denotes | epidemic diarrhea | MESH:D003967 |
| 74 | 275-283 | Disease | denotes | diarrhea | MESH:D003967 |
| 75 | 285-296 | Disease | denotes | dehydration | MESH:D003681 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T10 | 91-94 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T5 | 17-25 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T6 | 190-198 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T7 | 244-257 | Disease | denotes | swine disease | http://purl.obolibrary.org/obo/MONDO_0024990 |
| T8 | 275-283 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T20 | 26-31 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T21 | 95-100 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T22 | 206-207 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T23 | 495-496 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T24 | 719-720 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T25 | 1423-1426 | http://purl.obolibrary.org/obo/CLO_0003423 | denotes | G1b |
| T26 | 1447-1448 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T27 | 1486-1487 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T28 | 1534-1535 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T2 | 1268-1270 | Chemical | denotes | II | http://purl.obolibrary.org/obo/CHEBI_74067 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12 | 306-312 | http://purl.obolibrary.org/obo/GO_0040007 | denotes | growth |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T13 | 0-141 | Sentence | denotes | Porcine epidemic diarrhea virus (PEDV) is an enveloped, positive-sense and single stranded RNA virus belonging to the genus Alphacoronavirus. |
| T14 | 142-351 | Sentence | denotes | PEDV is the causative agent of porcine epidemic diarrhea (PED), a historic, highly contagious enteric swine disease characterized by diarrhea, dehydration and poor growth performance in pigs at all ages [1,2]. |
| T15 | 352-548 | Sentence | denotes | PED was first identified in 1971 in the United Kingdom, and subsequently became an endemic disease in the Europe and most Asian countries with a low mortality rate and limited economic losses [1]. |
| T16 | 549-689 | Sentence | denotes | For decades, the disease was controlled through the use of live attenuated vaccines (LAVs) derived from the PEDV prototypes, CV777- or DR13. |
| T17 | 690-823 | Sentence | denotes | Unfortunately, in late 2010, a new highly virulent PEDV strain emerged in China and quickly spread worldwide, including Taiwan [3,4]. |
| T18 | 824-1084 | Sentence | denotes | Moreover, the conventional LAV failed to induce protection against this new virulent PEDV strain, consequently resulting in nearly 100% mortality amongst neonatal piglets and leading to substantial economic impacts on swine markets in the affected regions [5]. |
| T19 | 1085-1148 | Sentence | denotes | Phylogenetic analysis categorizes PEDV into two genogroups [2]. |
| T20 | 1149-1346 | Sentence | denotes | Genogroup I consists primarily of the historic, low-virulent PEDV strains that appeared around 1970, whereas genogroup II is composed of the highly virulent PEDV strains, which emerged after 2010s. |
| T21 | 1347-1554 | Sentence | denotes | Both genogroups can be further divided into two subgroups each, namely G1a, G1b, G2a and G2b though a recent phylogenetic study identified a novel recombinant PEDV strain classified into a new G1c clade [6]. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T5 | 17-25 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T6 | 190-198 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T7 | 275-283 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T8 | 285-296 | Phenotype | denotes | dehydration | http://purl.obolibrary.org/obo/HP_0001944 |
| T9 | 301-312 | Phenotype | denotes | poor growth | http://purl.obolibrary.org/obo/HP_0001510 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 31905842-83132-144353208 | 346-347 | 83132 | denotes | 1 |
| 31905842-26689811-144353209 | 348-349 | 26689811 | denotes | 2 |
| 31905842-83132-144353210 | 545-546 | 83132 | denotes | 1 |
| 31905842-22840964-144353211 | 818-819 | 22840964 | denotes | 3 |
| 31905842-25903998-144353212 | 820-821 | 25903998 | denotes | 4 |
| 31905842-26641031-144353213 | 1081-1082 | 26641031 | denotes | 5 |
| 31905842-26689811-144353214 | 1145-1146 | 26689811 | denotes | 2 |