PMC:7003341 / 43282-44434
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T169 | 108-113 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T170 | 128-133 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
| T171 | 138-144 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
| T172 | 185-196 | Body_part | denotes | erythrocyte | http://purl.org/sig/ont/fma/fma62845 |
| T173 | 234-241 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T174 | 307-312 | Body_part | denotes | urine | http://purl.org/sig/ont/fma/fma12274 |
| T175 | 349-360 | Body_part | denotes | interleukin | http://purl.org/sig/ont/fma/fma86578 |
| T176 | 361-363 | Body_part | denotes | IL | http://purl.org/sig/ont/fma/fma86578 |
| T177 | 368-370 | Body_part | denotes | IL | http://purl.org/sig/ont/fma/fma86578 |
| T178 | 462-467 | Body_part | denotes | Blood | http://purl.org/sig/ont/fma/fma9670 |
| T179 | 713-718 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
| T180 | 728-734 | Body_part | denotes | muscle | http://purl.org/sig/ont/fma/fma32558 |
| T181 | 871-875 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T182 | 1032-1045 | Body_part | denotes | blood vessels | http://purl.org/sig/ont/fma/fma63183 |
| T183 | 1032-1037 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T111 | 108-113 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T112 | 128-133 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
| T113 | 138-144 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
| T114 | 307-312 | Body_part | denotes | urine | http://purl.obolibrary.org/obo/UBERON_0001088 |
| T115 | 462-467 | Body_part | denotes | Blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T116 | 713-718 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
| T117 | 871-875 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T118 | 1032-1045 | Body_part | denotes | blood vessels | http://purl.obolibrary.org/obo/UBERON_0001981 |
| T119 | 1032-1037 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T120 | 1038-1045 | Body_part | denotes | vessels | http://purl.obolibrary.org/obo/UBERON_0000055 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T106 | 77-96 | Disease | denotes | 2019-nCoV infection | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T107 | 87-96 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T108 | 264-267 | Disease | denotes | PCT | http://purl.obolibrary.org/obo/MONDO_0008296|http://purl.obolibrary.org/obo/MONDO_0015104 |
| T110 | 397-409 | Disease | denotes | tuberculosis | http://purl.obolibrary.org/obo/MONDO_0018076 |
| T111 | 411-413 | Disease | denotes | TB | http://purl.obolibrary.org/obo/MONDO_0018076 |
| T112 | 787-790 | Disease | denotes | PCT | http://purl.obolibrary.org/obo/MONDO_0008296|http://purl.obolibrary.org/obo/MONDO_0015104 |
| T114 | 844-863 | Disease | denotes | bacterial infection | http://purl.obolibrary.org/obo/MONDO_0005113 |
| T115 | 854-863 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T297 | 17-24 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
| T298 | 53-58 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
| T299 | 108-113 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T300 | 108-113 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T301 | 128-133 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
| T302 | 128-133 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
| T303 | 138-144 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| T304 | 138-144 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
| T305 | 138-144 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
| T306 | 174-183 | http://purl.obolibrary.org/obo/PR_000010213 | denotes | myoglobin |
| T307 | 185-196 | http://purl.obolibrary.org/obo/CL_0000232 | denotes | erythrocyte |
| T308 | 321-325 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T309 | 385-387 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
| T310 | 462-467 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | Blood |
| T311 | 462-467 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | Blood |
| T312 | 713-718 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
| T313 | 713-718 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
| T314 | 728-734 | http://purl.obolibrary.org/obo/UBERON_0001630 | denotes | muscle |
| T315 | 728-734 | http://purl.obolibrary.org/obo/UBERON_0005090 | denotes | muscle |
| T316 | 728-734 | http://www.ebi.ac.uk/efo/EFO_0000801 | denotes | muscle |
| T317 | 728-734 | http://www.ebi.ac.uk/efo/EFO_0001949 | denotes | muscle |
| T318 | 751-760 | http://purl.obolibrary.org/obo/PR_000010213 | denotes | myoglobin |
| T319 | 871-875 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T320 | 871-875 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T321 | 1032-1045 | http://purl.obolibrary.org/obo/UBERON_0001981 | denotes | blood vessels |
| T322 | 1032-1045 | http://www.ebi.ac.uk/efo/EFO_0000817 | denotes | blood vessels |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T57 | 174-183 | Chemical | denotes | myoglobin | http://purl.obolibrary.org/obo/CHEBI_7044 |
| T58 | 234-241 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T59 | 270-277 | Chemical | denotes | lactate | http://purl.obolibrary.org/obo/CHEBI_24996 |
| T60 | 361-363 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
| T62 | 368-370 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
| T64 | 442-446 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T65 | 591-595 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T66 | 751-760 | Chemical | denotes | myoglobin | http://purl.obolibrary.org/obo/CHEBI_7044 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T104 | 703-726 | Phenotype | denotes | increased liver enzymes | http://purl.obolibrary.org/obo/HP_0002910 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7 | 288-299 | http://purl.obolibrary.org/obo/GO_0050817 | denotes | coagulation |
| T8 | 969-977 | http://purl.obolibrary.org/obo/GO_0050817 | denotes | clotting |
| T9 | 1008-1017 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | formation |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T346 | 0-25 | Sentence | denotes | Other laboratory testing. |
| T347 | 26-461 | Sentence | denotes | There are other laboratory tests for the status of 2019-nCoV infection, including blood gas analysis, liver and kidney function, myocardial enzyme, myoglobin, erythrocyte sedimentation rate (ESR), C-reactive protein (CRP), Procalcitonin (PCT), lactate, D-dimer, coagulation image, urine routine test, inflammatory factors (interleukin(IL)-6, IL-10, TNF - α), 11 items of tuberculosis (TB) subgroup, complement, anti-acid staining, etc. |
| T348 | 462-557 | Sentence | denotes | Blood gas analysis is helpful to judge the oxygenation of moderately-illed and severe patients. |
| T349 | 558-674 | Sentence | denotes | Combining the increase of lactic acid, it is feasible to screen the patients with high-risk of oxygenation disorder. |
| T350 | 675-761 | Sentence | denotes | Some infected patients have increased liver enzymes, muscle enzyme, ESR and myoglobin. |
| T351 | 762-876 | Sentence | denotes | The detection of CRP and PCT is of certain value to distinguish whether there was bacterial infection in the lung. |
| T352 | 877-1046 | Sentence | denotes | D-dimer of most severe patients was significantly increased in this epidemic, with frequent clotting disorders and microthrombotic formation in peripheral blood vessels. |
| T353 | 1047-1152 | Sentence | denotes | Detection of other inflammatory factors may help to preliminarily evaluate the immune status of patients. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 643 | 174-183 | Gene | denotes | myoglobin | Gene:4151 |
| 644 | 223-241 | Gene | denotes | C-reactive protein | Gene:1401 |
| 645 | 243-246 | Gene | denotes | CRP | Gene:1401 |
| 646 | 348-366 | Gene | denotes | (interleukin(IL)-6 | Gene:3569 |
| 647 | 368-373 | Gene | denotes | IL-10 | Gene:3586 |
| 648 | 375-382 | Gene | denotes | TNF - α | Gene:7124 |
| 649 | 751-760 | Gene | denotes | myoglobin | Gene:4151 |
| 650 | 779-782 | Gene | denotes | CRP | Gene:1401 |
| 651 | 548-556 | Species | denotes | patients | Tax:9606 |
| 652 | 626-634 | Species | denotes | patients | Tax:9606 |
| 653 | 689-697 | Species | denotes | patients | Tax:9606 |
| 654 | 900-908 | Species | denotes | patients | Tax:9606 |
| 655 | 1143-1151 | Species | denotes | patients | Tax:9606 |
| 656 | 270-277 | Chemical | denotes | lactate | MESH:D019344 |
| 657 | 584-595 | Chemical | denotes | lactic acid | MESH:D019344 |
| 658 | 77-96 | Disease | denotes | 2019-nCoV infection | MESH:C000657245 |
| 659 | 397-409 | Disease | denotes | tuberculosis | MESH:D014376 |
| 660 | 653-673 | Disease | denotes | oxygenation disorder | MESH:D000860 |
| 661 | 680-688 | Disease | denotes | infected | MESH:D007239 |
| 662 | 854-863 | Disease | denotes | infection | MESH:D007239 |
| 663 | 969-987 | Disease | denotes | clotting disorders | MESH:D020141 |