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PMC:7001239 / 3330-4246 JSONTXT

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LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T32 3-4 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T33 130-131 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T34 324-325 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T35 514-515 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T36 542-543 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T37 596-597 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T38 733-734 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T2 491-496 Chemical denotes gamma http://purl.obolibrary.org/obo/CHEBI_30212

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T24 0-64 Sentence denotes In a first step, we initialised simulations with one index case.
T25 65-209 Sentence denotes For each primary case, we generated secondary cases according to a negative-binomial offspring distribution with mean R0 and dispersion k [7,8].
T26 210-441 Sentence denotes The dispersion parameter k quantifies the variability in the number of secondary cases, and can be interpreted as a measure of the impact of superspreading events (the lower the value of k, the higher the impact of superspreading).
T27 442-583 Sentence denotes The generation time interval D was assumed to be gamma-distributed with a shape parameter of 2, and a mean that varied between 7 and 14 days.
T28 584-712 Sentence denotes We explored a wide range of parameter combinations (Table) and ran 1,000 stochastic simulations for each individual combination.
T29 713-916 Sentence denotes This corresponds to a total of 3.52 million one-index-case simulations that were run on UBELIX (http://www.id.unibe.ch/hpc), the high performance computing cluster at the University of Bern, Switzerland.

2_test

Id Subject Object Predicate Lexical cue
32019669-16292310-29338348 204-205 16292310 denotes 7
32019669-25932579-29338349 206-207 25932579 denotes 8

MyTest

Id Subject Object Predicate Lexical cue
32019669-16292310-29338348 204-205 16292310 denotes 7
32019669-25932579-29338349 206-207 25932579 denotes 8