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PMC:6988269 / 17855-18622 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T85 192-198 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T86 210-213 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T87 324-327 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T88 469-475 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T89 487-490 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T90 553-556 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T91 694-700 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T92 712-715 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T6 192-198 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T7 469-475 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T8 694-700 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T185 0-1 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T186 28-35 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T187 50-55 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T188 134-135 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T189 169-174 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T190 184-191 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T191 280-285 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T192 286-292 http://purl.obolibrary.org/obo/UBERON_0001005 denotes airway
T193 293-303 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T194 446-451 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T195 461-468 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T196 671-676 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T197 686-693 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T172 0-133 Sentence denotes a For samples with multiple viruses detected, the virus with highest concentration is listed, as indicated by real-time PCR Ct value.
T173 134-199 Sentence denotes b Directly quantified or spiked in human negative-testing sputum.
T174 200-265 Sentence denotes c 1 × 105 RNA copies/mL, determined by specific real-time RT-PCR.
T175 266-312 Sentence denotes Isolated from human airway epithelial culture.
T176 313-394 Sentence denotes d 1 × 1010 RNA copies/mL, determined by specific real-time RT-PCR of one isolate.
T177 395-476 Sentence denotes The other isolate was not quantified but spiked in human negative-testing sputum.
T178 477-542 Sentence denotes e 4 × 109 RNA copies/mL, determined by specific real-time RT-PCR.
T179 543-623 Sentence denotes f 3 × 109 RNA copies/mL, determined by specific real-time RT-PCR of one isolate.
T180 624-701 Sentence denotes The other isolate was not quantified spiked in human negative-testing sputum.
T181 702-767 Sentence denotes g 1 × 108 RNA copies/mL, determined by specific real-time RT-PCR.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
329 169-174 Species denotes human Tax:9606
332 221-223 Gene denotes mL Gene:21832
333 280-285 Species denotes human Tax:9606
336 335-337 Gene denotes mL Gene:21832
337 446-451 Species denotes human Tax:9606
339 498-500 Gene denotes mL Gene:21832
342 564-566 Gene denotes mL Gene:21832
343 671-676 Species denotes human Tax:9606
345 723-725 Gene denotes mL Gene:21832