PMC:6988269 / 16296-16988 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/6988269","sourcedb":"PMC","sourceid":"6988269","source_url":"https://www.ncbi.nlm.nih.gov/pmc/6988269","text":"Cell culture supernatants containing all endemic human coronaviruses (HCoV)‑229E, ‑NL63, ‑OC43 and ‑HKU1 as well as MERS-CoV were tested in duplicate in all three assays (Table 2). For the non-cultivable HCoV-HKU1, supernatant from human airway culture was used. Viral RNA concentration in all samples was determined by specific real-time RT-PCRs and in vitro-transcribed RNA standards designed for absolute quantification of viral load. Additional undiluted (but not quantified) cell culture supernatants were tested as summarised in Table 2. These were additionally mixed into negative human sputum samples. None of the tested viruses or virus preparations showed reactivity with any assay.","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T78","span":{"begin":0,"end":4},"obj":"Body_part"},{"id":"T79","span":{"begin":269,"end":272},"obj":"Body_part"},{"id":"T80","span":{"begin":372,"end":375},"obj":"Body_part"},{"id":"T81","span":{"begin":480,"end":484},"obj":"Body_part"},{"id":"T82","span":{"begin":594,"end":600},"obj":"Body_part"}],"attributes":[{"id":"A78","pred":"fma_id","subj":"T78","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A79","pred":"fma_id","subj":"T79","obj":"http://purl.org/sig/ont/fma/fma67095"},{"id":"A80","pred":"fma_id","subj":"T80","obj":"http://purl.org/sig/ont/fma/fma67095"},{"id":"A81","pred":"fma_id","subj":"T81","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A82","pred":"fma_id","subj":"T82","obj":"http://purl.org/sig/ont/fma/fma312401"},{"subj":"T78","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T79","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T80","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T81","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T82","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T5","span":{"begin":594,"end":600},"obj":"Body_part"}],"attributes":[{"id":"A5","pred":"uberon_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/UBERON_0007311"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T146","span":{"begin":0,"end":4},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T147","span":{"begin":49,"end":54},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T148","span":{"begin":130,"end":136},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T149","span":{"begin":232,"end":237},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T150","span":{"begin":238,"end":244},"obj":"http://purl.obolibrary.org/obo/UBERON_0001005"},{"id":"T151","span":{"begin":480,"end":484},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T152","span":{"begin":511,"end":517},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T153","span":{"begin":588,"end":593},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T154","span":{"begin":622,"end":628},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T155","span":{"begin":629,"end":636},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T156","span":{"begin":640,"end":645},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"}],"attributes":[{"subj":"T146","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T147","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T148","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T149","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T150","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T151","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T152","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T153","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T154","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T155","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T156","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T139","span":{"begin":0,"end":180},"obj":"Sentence"},{"id":"T140","span":{"begin":181,"end":262},"obj":"Sentence"},{"id":"T141","span":{"begin":263,"end":437},"obj":"Sentence"},{"id":"T142","span":{"begin":438,"end":543},"obj":"Sentence"},{"id":"T143","span":{"begin":544,"end":609},"obj":"Sentence"},{"id":"T144","span":{"begin":610,"end":692},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T139","pred":"source","obj":"LitCovid-sentences"},{"subj":"T140","pred":"source","obj":"LitCovid-sentences"},{"subj":"T141","pred":"source","obj":"LitCovid-sentences"},{"subj":"T142","pred":"source","obj":"LitCovid-sentences"},{"subj":"T143","pred":"source","obj":"LitCovid-sentences"},{"subj":"T144","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"287","span":{"begin":89,"end":104},"obj":"Gene"},{"id":"288","span":{"begin":49,"end":54},"obj":"Species"},{"id":"289","span":{"begin":55,"end":68},"obj":"Species"},{"id":"290","span":{"begin":70,"end":80},"obj":"Species"},{"id":"291","span":{"begin":116,"end":124},"obj":"Species"},{"id":"292","span":{"begin":204,"end":213},"obj":"Species"},{"id":"293","span":{"begin":232,"end":237},"obj":"Species"},{"id":"294","span":{"begin":588,"end":593},"obj":"Species"},{"id":"295","span":{"begin":83,"end":87},"obj":"Species"}],"attributes":[{"id":"A288","pred":"tao:has_database_id","subj":"288","obj":"Tax:9606"},{"id":"A289","pred":"tao:has_database_id","subj":"289","obj":"Tax:11118"},{"id":"A290","pred":"tao:has_database_id","subj":"290","obj":"Tax:11137"},{"id":"A291","pred":"tao:has_database_id","subj":"291","obj":"Tax:1335626"},{"id":"A292","pred":"tao:has_database_id","subj":"292","obj":"Tax:290028"},{"id":"A293","pred":"tao:has_database_id","subj":"293","obj":"Tax:9606"},{"id":"A294","pred":"tao:has_database_id","subj":"294","obj":"Tax:9606"},{"id":"A295","pred":"tao:has_database_id","subj":"295","obj":"Tax:277944"},{"subj":"287","pred":"source","obj":"LitCovid-PubTator"},{"subj":"288","pred":"source","obj":"LitCovid-PubTator"},{"subj":"289","pred":"source","obj":"LitCovid-PubTator"},{"subj":"290","pred":"source","obj":"LitCovid-PubTator"},{"subj":"291","pred":"source","obj":"LitCovid-PubTator"},{"subj":"292","pred":"source","obj":"LitCovid-PubTator"},{"subj":"293","pred":"source","obj":"LitCovid-PubTator"},{"subj":"294","pred":"source","obj":"LitCovid-PubTator"},{"subj":"295","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#9793ec","default":true},{"id":"LitCovid-PD-UBERON","color":"#a9ec93"},{"id":"LitCovid-PD-CLO","color":"#ec93c3"},{"id":"LitCovid-sentences","color":"#93ddec"},{"id":"LitCovid-PubTator","color":"#ece193"}]}]}}