PMC:6988269 / 14522-15115
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T73 | 38-41 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T74 | 157-160 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T75 | 553-556 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T76 | 589-592 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T45 | 29-37 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T46 | 29-33 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T47 | 257-265 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T48 | 257-261 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T49 | 580-588 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T50 | 580-584 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T126 | 57-58 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T127 | 223-224 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T128 | 485-490 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T129 | 522-524 | http://purl.obolibrary.org/obo/CLO_0008307 | denotes | P2 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T44 | 237-242 | Chemical | denotes | probe | http://purl.obolibrary.org/obo/CHEBI_50406 |
| T45 | 298-303 | Chemical | denotes | probe | http://purl.obolibrary.org/obo/CHEBI_50406 |
| T46 | 505-510 | Chemical | denotes | probe | http://purl.obolibrary.org/obo/CHEBI_50406 |
| T47 | 522-524 | Chemical | denotes | P2 | http://purl.obolibrary.org/obo/CHEBI_33472 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12 | 557-567 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcript |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T125 | 0-336 | Sentence | denotes | Following the rationale that SARS-CoV RNA can be used as a positive control for the entire laboratory procedure, thus obviating the need to handle 2019-nCoV RNA, we formulated the RdRp assay so that it contains two probes: a broad-range probe reacting with SARS-CoV and 2019-nCoV and an additional probe that reacts only with 2019-nCoV. |
| T126 | 337-491 | Sentence | denotes | By limiting dilution experiments, we confirmed that both probes, whether used individually or in combination, provided the same LOD for each target virus. |
| T127 | 492-593 | Sentence | denotes | The specific probe RdRP_SARSr-P2 detected only the 2019-nCoV RNA transcript but not the SARS-CoV RNA. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 256 | 180-184 | Gene | denotes | RdRp | Gene:43740578 |
| 257 | 29-37 | Species | denotes | SARS-CoV | Tax:694009 |
| 258 | 147-156 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 259 | 257-265 | Species | denotes | SARS-CoV | Tax:694009 |
| 260 | 270-279 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 261 | 326-335 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 262 | 543-552 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 263 | 580-588 | Species | denotes | SARS-CoV | Tax:694009 |