PMC:6988269 / 14445-15115
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T73 | 115-118 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T74 | 234-237 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T75 | 630-633 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T76 | 666-669 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T44 | 46-50 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T45 | 106-114 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T46 | 106-110 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T47 | 334-342 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T48 | 334-338 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T49 | 657-665 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T50 | 657-661 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T126 | 134-135 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T127 | 300-301 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T128 | 562-567 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T129 | 599-601 | http://purl.obolibrary.org/obo/CLO_0008307 | denotes | P2 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T44 | 314-319 | Chemical | denotes | probe | http://purl.obolibrary.org/obo/CHEBI_50406 |
| T45 | 375-380 | Chemical | denotes | probe | http://purl.obolibrary.org/obo/CHEBI_50406 |
| T46 | 582-587 | Chemical | denotes | probe | http://purl.obolibrary.org/obo/CHEBI_50406 |
| T47 | 599-601 | Chemical | denotes | P2 | http://purl.obolibrary.org/obo/CHEBI_33472 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12 | 634-644 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcript |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T124 | 0-76 | Sentence | denotes | Discrimination of 2019 novel coronavirus from SARS coronavirus by RdRp assay |
| T125 | 77-413 | Sentence | denotes | Following the rationale that SARS-CoV RNA can be used as a positive control for the entire laboratory procedure, thus obviating the need to handle 2019-nCoV RNA, we formulated the RdRp assay so that it contains two probes: a broad-range probe reacting with SARS-CoV and 2019-nCoV and an additional probe that reacts only with 2019-nCoV. |
| T126 | 414-568 | Sentence | denotes | By limiting dilution experiments, we confirmed that both probes, whether used individually or in combination, provided the same LOD for each target virus. |
| T127 | 569-670 | Sentence | denotes | The specific probe RdRP_SARSr-P2 detected only the 2019-nCoV RNA transcript but not the SARS-CoV RNA. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 245 | 66-70 | Gene | denotes | RdRp | Gene:43740578 |
| 246 | 18-40 | Species | denotes | 2019 novel coronavirus | Tax:2697049 |
| 247 | 46-62 | Species | denotes | SARS coronavirus | Tax:694009 |
| 256 | 257-261 | Gene | denotes | RdRp | Gene:43740578 |
| 257 | 106-114 | Species | denotes | SARS-CoV | Tax:694009 |
| 258 | 224-233 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 259 | 334-342 | Species | denotes | SARS-CoV | Tax:694009 |
| 260 | 347-356 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 261 | 403-412 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 262 | 620-629 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 263 | 657-665 | Species | denotes | SARS-CoV | Tax:694009 |