PMC:6988269 / 10381-11185
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T40 | 597-608 | Body_part | denotes | nucleotides | http://purl.org/sig/ont/fma/fma82740 |
| T41 | 648-658 | Body_part | denotes | Nucleotide | http://purl.org/sig/ont/fma/fma82740 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T31 | 65-69 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T32 | 204-212 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T33 | 204-208 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T34 | 363-367 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T35 | 485-489 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T91 | 254-255 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T92 | 330-331 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T93 | 348-351 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bat |
| T94 | 352-357 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T95 | 388-391 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bat |
| T96 | 498-501 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bat |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T33 | 32-47 | Chemical | denotes | oligonucleotide | http://purl.obolibrary.org/obo/CHEBI_7754 |
| T34 | 392-394 | Chemical | denotes | SL | http://purl.obolibrary.org/obo/CHEBI_74815 |
| T35 | 597-608 | Chemical | denotes | nucleotides | http://purl.obolibrary.org/obo/CHEBI_36976 |
| T36 | 648-658 | Chemical | denotes | Nucleotide | http://purl.obolibrary.org/obo/CHEBI_36976 |
| T37 | 701-717 | Chemical | denotes | oligonucleotides | http://purl.obolibrary.org/obo/CHEBI_7754 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T84 | 0-99 | Sentence | denotes | Figure 2 Partial alignments of oligonucleotide binding regions, SARS-related coronaviruses (n = 9) |
| T85 | 100-301 | Sentence | denotes | The panels show six available sequences of 2019-nCoV, aligned to the corresponding partial sequences of SARS-CoV strain Frankfurt 1, which can be used as a positive control for all three RT-PCR assays. |
| T86 | 302-571 | Sentence | denotes | The alignment also contains a closely related bat virus (Bat SARS-related CoV isolate bat-SL-CoVZC45, GenBank accession number MG772933) as well as the most distant member within the SARS-related bat CoV clade, detected in Bulgaria (GenBank accession number NC_014470). |
| T87 | 572-647 | Sentence | denotes | Dots represent identical nucleotides compared with the WH_Human_1 sequence. |
| T88 | 648-687 | Sentence | denotes | Nucleotide substitutions are specified. |
| T89 | 688-742 | Sentence | denotes | Blue arrows: oligonucleotides as specified in Table 1. |
| T90 | 743-804 | Sentence | denotes | More comprehensive alignments can be found in the Supplement. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 192 | 65-91 | Species | denotes | SARS-related coronaviruses | Tax:694009 |
| 193 | 32-47 | Chemical | denotes | oligonucleotide | MESH:D009841 |
| 199 | 143-152 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 200 | 204-212 | Species | denotes | SARS-CoV | Tax:694009 |
| 201 | 363-379 | Species | denotes | SARS-related CoV | Tax:694009 |
| 202 | 502-505 | Species | denotes | CoV | Tax:11118 |
| 203 | 701-717 | Chemical | denotes | oligonucleotides | MESH:D009841 |