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PMC:539297 / 18429-19105 JSONTXT

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craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T9758 0-11 GO:0006897 denotes Endocytosis
T9759 54-56 UBERON:0002037 denotes Cb
T9760 56-60 PR:000005591 denotes Cln3
T9761 73-80 CHEBI:52071 denotes Dextran
T9762 81-85 CHEBI:37926 denotes FITC
T9763 135-137 UBERON:0002037 denotes Cb
T9764 137-141 PR:000005591 denotes Cln3
T9765 188-190 UBERON:0002037 denotes Cb
T9766 190-194 PR:000005591 denotes Cln3
T9767 229-231 UBERON:0002037 denotes Cb
T9768 231-235 PR:000005591 denotes Cln3
T9769 266-273 CHEBI:52071 denotes dextran
T9770 274-278 CHEBI:37926 denotes FITC
T9771 307-314 GO:0005634 denotes nuclear
T9772 325-334 GO:0031982 denotes vesicular
T9773 366-374 GO:0031982 denotes vesicles
T9774 419-426 CHEBI:52071 denotes dextran
T9775 427-431 CHEBI:37926 denotes FITC
T9776 460-462 UBERON:0002037 denotes Cb
T9777 462-466 PR:000005591 denotes Cln3
T9778 550-558 GO:0031982 denotes vesicles
T9779 573-580 GO:0005634 denotes nuclear

craft-sa-dev

Id Subject Object Predicate Lexical cue
T9816 0-11 NN denotes Endocytosis
T9817 167-172 VBN denotes shown
T9818 12-14 IN denotes in
T9819 15-19 JJ denotes wild
T9820 20-24 NN denotes type
T9821 19-20 HYPH denotes -
T9822 67-72 NNS denotes cells
T9823 24-26 , denotes ,
T9824 26-38 JJ denotes heterozygous
T9825 39-42 CC denotes and
T9826 43-53 JJ denotes homozygous
T9827 54-64 NN denotes CbCln3Δex7
T9828 64-65 HYPH denotes /
T9829 65-66 CD denotes 8
T9830 73-80 NN denotes Dextran
T9831 81-85 NN denotes FITC
T9832 80-81 HYPH denotes -
T9833 86-92 NN denotes uptake
T9834 93-95 IN denotes in
T9835 96-100 JJ denotes wild
T9836 101-105 NN denotes type
T9837 100-101 HYPH denotes -
T9838 158-163 NNS denotes cells
T9839 105-107 , denotes ,
T9840 107-119 JJ denotes heterozygous
T9841 120-123 CC denotes and
T9842 124-134 JJ denotes homozygous
T9843 135-145 NN denotes CbCln3Δex7
T9844 145-146 HYPH denotes /
T9845 146-147 CD denotes 8
T9846 148-157 NN denotes precursor
T9847 164-166 VBZ denotes is
T9848 172-173 . denotes .
T9849 173-405 sentence denotes In wild-type (CbCln3+/+, left panel) and heterozygous (CbCln3+/Δex7/8, middle panel) cells, dextran-FITC label was observed in a perinuclear-clustered vesicular pattern with scattered labeled vesicles also present in the periphery.
T9850 174-176 IN denotes In
T9851 289-297 VBN denotes observed
T9852 177-181 JJ denotes wild
T9853 182-186 NN denotes type
T9854 181-182 HYPH denotes -
T9855 259-264 NNS denotes cells
T9856 187-188 -LRB- denotes (
T9857 188-194 NN denotes CbCln3
T9858 194-195 SYM denotes +
T9859 195-196 HYPH denotes /
T9860 196-197 SYM denotes +
T9861 197-199 , denotes ,
T9862 204-209 NN denotes panel
T9863 199-203 JJ denotes left
T9864 209-210 -RRB- denotes )
T9865 211-214 CC denotes and
T9866 215-227 JJ denotes heterozygous
T9867 228-229 -LRB- denotes (
T9868 252-257 NN denotes panel
T9869 229-235 NN denotes CbCln3
T9870 237-241 NN denotes Δex7
T9871 235-236 SYM denotes +
T9872 236-237 HYPH denotes /
T9873 241-242 HYPH denotes /
T9874 242-243 CD denotes 8
T9875 243-245 , denotes ,
T9876 245-251 JJ denotes middle
T9877 257-258 -RRB- denotes )
T9878 264-266 , denotes ,
T9879 266-273 NN denotes dextran
T9880 274-278 NN denotes FITC
T9881 273-274 HYPH denotes -
T9882 279-284 NN denotes label
T9883 285-288 VBD denotes was
T9884 298-300 IN denotes in
T9885 301-302 DT denotes a
T9886 335-342 NN denotes pattern
T9887 303-314 JJ denotes perinuclear
T9888 315-324 VBN denotes clustered
T9889 314-315 HYPH denotes -
T9890 325-334 JJ denotes vesicular
T9891 343-347 IN denotes with
T9892 348-357 VBN denotes scattered
T9893 366-374 NNS denotes vesicles
T9894 358-365 VBN denotes labeled
T9895 375-379 RB denotes also
T9896 380-387 JJ denotes present
T9897 388-390 IN denotes in
T9898 391-394 DT denotes the
T9899 395-404 NN denotes periphery
T9900 404-405 . denotes .
T9901 405-592 sentence denotes In contrast, dextran-FITC label of homozygous mutant (CbCln3Δex7/8/Δex7/8, right panel) cells was reduced overall and exhibited smaller stained vesicles with less perinuclear clustering.
T9902 406-408 IN denotes In
T9903 504-511 VBN denotes reduced
T9904 409-417 NN denotes contrast
T9905 417-419 , denotes ,
T9906 419-426 NN denotes dextran
T9907 427-431 NN denotes FITC
T9908 426-427 HYPH denotes -
T9909 432-437 NN denotes label
T9910 438-440 IN denotes of
T9911 441-451 JJ denotes homozygous
T9912 452-458 NN denotes mutant
T9913 494-499 NNS denotes cells
T9914 459-460 -LRB- denotes (
T9915 460-470 NN denotes CbCln3Δex7
T9916 473-477 NN denotes Δex7
T9917 470-471 HYPH denotes /
T9918 471-472 CD denotes 8
T9919 472-473 HYPH denotes /
T9920 477-478 HYPH denotes /
T9921 478-479 CD denotes 8
T9922 479-481 , denotes ,
T9923 487-492 NN denotes panel
T9924 481-486 JJ denotes right
T9925 492-493 -RRB- denotes )
T9926 500-503 VBD denotes was
T9927 512-519 RB denotes overall
T9928 520-523 CC denotes and
T9929 524-533 VBD denotes exhibited
T9930 534-541 JJR denotes smaller
T9931 550-558 NNS denotes vesicles
T9932 542-549 VBN denotes stained
T9933 559-563 IN denotes with
T9934 564-568 RBR denotes less
T9935 581-591 NN denotes clustering
T9936 569-580 JJ denotes perinuclear
T9937 591-592 . denotes .
T9938 592-656 sentence denotes Confocal images were captured with identical exposure settings.
T9939 593-601 JJ denotes Confocal
T9940 602-608 NNS denotes images
T9941 614-622 VBN denotes captured
T9942 609-613 VBD denotes were
T9943 623-627 IN denotes with
T9944 628-637 JJ denotes identical
T9945 647-655 NNS denotes settings
T9946 638-646 NN denotes exposure
T9947 655-656 . denotes .
T9948 656-676 sentence denotes 40 × magnification.
T9949 657-659 CD denotes 40
T9950 662-675 NN denotes magnification
T9951 660-661 SYM denotes ×
T9952 675-676 . denotes .
R6202 T9820 T9822 nmod type,cells
R6199 T9816 T9817 dep Endocytosis,shown
R6200 T9818 T9816 prep in,Endocytosis
R6201 T9819 T9820 amod wild,type
R6203 T9821 T9820 punct -,type
R6204 T9822 T9818 pobj cells,in
R6205 T9823 T9820 punct ", ",type
R6206 T9824 T9820 conj heterozygous,type
R6207 T9825 T9824 cc and,heterozygous
R6208 T9826 T9824 conj homozygous,heterozygous
R6209 T9827 T9822 nmod CbCln3Δex7,cells
R6210 T9828 T9827 punct /,CbCln3Δex7
R6211 T9829 T9827 nummod 8,CbCln3Δex7
R6212 T9830 T9831 compound Dextran,FITC
R6213 T9831 T9833 compound FITC,uptake
R6214 T9832 T9831 punct -,FITC
R6215 T9833 T9817 nsubjpass uptake,shown
R6216 T9834 T9833 prep in,uptake
R6217 T9835 T9836 amod wild,type
R6218 T9836 T9838 nmod type,cells
R6219 T9837 T9836 punct -,type
R6221 T9839 T9836 punct ", ",type
R6222 T9840 T9836 conj heterozygous,type
R6223 T9841 T9840 cc and,heterozygous
R6224 T9842 T9840 conj homozygous,heterozygous
R6235 T9855 T9850 pobj cells,In
R6248 T9868 T9866 parataxis panel,heterozygous
R6249 T9869 T9870 nmod CbCln3,Δex7
R6250 T9870 T9868 dep Δex7,panel
R6251 T9871 T9870 punct +,Δex7
R6252 T9872 T9870 punct /,Δex7
R6253 T9873 T9870 punct /,Δex7
R6254 T9874 T9870 nummod 8,Δex7
R6255 T9875 T9868 punct ", ",panel
R6256 T9876 T9868 amod middle,panel
R6257 T9877 T9868 punct ),panel
R6258 T9878 T9851 punct ", ",observed
R6259 T9879 T9880 compound dextran,FITC
R6260 T9880 T9882 compound FITC,label
R6261 T9881 T9880 punct -,FITC
R6262 T9882 T9851 nsubjpass label,observed
R6263 T9883 T9851 auxpass was,observed
R6264 T9884 T9851 prep in,observed
R6265 T9885 T9886 det a,pattern
R6266 T9886 T9884 pobj pattern,in
R6267 T9887 T9888 amod perinuclear,clustered
R6268 T9888 T9886 amod clustered,pattern
R6269 T9889 T9888 punct -,clustered
R6270 T9890 T9886 amod vesicular,pattern
R6271 T9891 T9851 prep with,observed
R6272 T9892 T9893 amod scattered,vesicles
R6274 T9894 T9893 amod labeled,vesicles
R6276 T9896 T9893 relcl present,vesicles
R6277 T9897 T9896 prep in,present
R6278 T9898 T9899 det the,periphery
R6279 T9899 T9897 pobj periphery,in
R6280 T9900 T9851 punct .,observed
R6281 T9902 T9903 prep In,reduced
R6282 T9904 T9902 pobj contrast,In
R6283 T9905 T9903 punct ", ",reduced
R6284 T9906 T9907 compound dextran,FITC
R6285 T9907 T9909 compound FITC,label
R6286 T9908 T9907 punct -,FITC
R6287 T9909 T9903 nsubjpass label,reduced
R6288 T9910 T9909 prep of,label
R6289 T9911 T9912 amod homozygous,mutant
R6290 T9912 T9913 nmod mutant,cells
R6291 T9913 T9910 pobj cells,of
R6292 T9914 T9912 punct (,mutant
R6293 T9915 T9916 nmod CbCln3Δex7,Δex7
R6294 T9916 T9912 appos Δex7,mutant
R6295 T9917 T9916 punct /,Δex7
R6296 T9918 T9916 nummod 8,Δex7
R6297 T9919 T9916 punct /,Δex7
R6298 T9920 T9916 punct /,Δex7
R6299 T9921 T9916 nummod 8,Δex7
R6300 T9922 T9923 punct ", ",panel
R6301 T9923 T9912 parataxis panel,mutant
R6302 T9924 T9923 amod right,panel
R6303 T9925 T9923 punct ),panel
R6304 T9926 T9903 auxpass was,reduced
R6305 T9927 T9903 advmod overall,reduced
R6306 T9928 T9903 cc and,reduced
R6307 T9929 T9903 conj exhibited,reduced
R6308 T9930 T9931 amod smaller,vesicles
R6309 T9931 T9929 dobj vesicles,exhibited
R6310 T9932 T9931 amod stained,vesicles
R6311 T9933 T9931 prep with,vesicles
R6312 T9934 T9935 advmod less,clustering
R6313 T9935 T9933 pobj clustering,with
R6314 T9936 T9935 amod perinuclear,clustering
R6315 T9937 T9903 punct .,reduced
R6316 T9939 T9940 amod Confocal,images
R6317 T9940 T9941 nsubjpass images,captured
R6318 T9942 T9941 auxpass were,captured
R6319 T9943 T9941 prep with,captured
R6320 T9944 T9945 amod identical,settings
R6321 T9945 T9943 pobj settings,with
R6322 T9946 T9945 compound exposure,settings
R6323 T9947 T9941 punct .,captured
R6324 T9949 T9950 nummod 40,magnification
R6325 T9951 T9949 punct ×,40
R6326 T9952 T9950 punct .,magnification
R6234 T9854 T9853 punct -,type
R6236 T9856 T9853 punct (,type
R6237 T9857 T9853 appos CbCln3,type
R6238 T9858 T9857 punct +,CbCln3
R6239 T9859 T9857 punct /,CbCln3
R6240 T9860 T9857 punct +,CbCln3
R6241 T9861 T9862 punct ", ",panel
R6273 T9893 T9891 pobj vesicles,with
R6275 T9895 T9896 advmod also,present
R6220 T9838 T9834 pobj cells,in
R6225 T9843 T9838 nmod CbCln3Δex7,cells
R6226 T9844 T9843 punct /,CbCln3Δex7
R6227 T9845 T9843 nummod 8,CbCln3Δex7
R6228 T9846 T9838 compound precursor,cells
R6229 T9847 T9817 auxpass is,shown
R6230 T9848 T9817 punct .,shown
R6231 T9850 T9851 prep In,observed
R6232 T9852 T9853 amod wild,type
R6233 T9853 T9855 nmod type,cells
R6242 T9862 T9853 parataxis panel,type
R6243 T9863 T9862 amod left,panel
R6244 T9864 T9862 punct ),panel
R6245 T9865 T9853 cc and,type
R6246 T9866 T9853 conj heterozygous,type
R6247 T9867 T9868 punct (,panel

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T9780 0-11 GO:0006897 denotes Endocytosis
T9781 15-24 SO_EXT:wild_type_entity_or_quality denotes wild-type
T9782 54-56 UBERON:0002037 denotes Cb
T9783 56-60 PR_EXT:000005591 denotes Cln3
T9784 67-72 CL_GO_EXT:cell denotes cells
T9785 73-80 CHEBI:52071 denotes Dextran
T9786 81-85 CHEBI:37926 denotes FITC
T9787 96-105 SO_EXT:wild_type_entity_or_quality denotes wild-type
T9788 135-137 UBERON:0002037 denotes Cb
T9789 137-141 PR_EXT:000005591 denotes Cln3
T9790 158-163 CL_GO_EXT:cell denotes cells
T9791 177-186 SO_EXT:wild_type_entity_or_quality denotes wild-type
T9792 188-190 UBERON:0002037 denotes Cb
T9793 190-194 PR_EXT:000005591 denotes Cln3
T9794 194-195 SO_EXT:normal_or_wild_type_or_present denotes +
T9795 196-197 SO_EXT:normal_or_wild_type_or_present denotes +
T9796 229-231 UBERON:0002037 denotes Cb
T9797 231-235 PR_EXT:000005591 denotes Cln3
T9798 235-236 SO_EXT:normal_or_wild_type_or_present denotes +
T9799 259-264 CL_GO_EXT:cell denotes cells
T9800 266-273 CHEBI:52071 denotes dextran
T9801 274-278 CHEBI:37926 denotes FITC
T9802 279-284 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes label
T9803 307-314 GO:0005634 denotes nuclear
T9804 325-334 GO:0031982 denotes vesicular
T9805 358-365 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes labeled
T9806 366-374 GO:0031982 denotes vesicles
T9807 419-426 CHEBI:52071 denotes dextran
T9808 427-431 CHEBI:37926 denotes FITC
T9809 432-437 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes label
T9810 452-458 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T9811 460-462 UBERON:0002037 denotes Cb
T9812 462-466 PR_EXT:000005591 denotes Cln3
T9813 494-499 CL_GO_EXT:cell denotes cells
T9814 550-558 GO:0031982 denotes vesicles
T9815 573-580 GO:0005634 denotes nuclear