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PMC:539061 / 19310-20053 JSONTXT

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craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3742 0-10 GO:0010467 denotes Expression
T3743 18-23 PR:000015308 denotes Snail
T3744 24-33 SO:0000902 denotes transgene
T3745 99-108 UBERON:0007376 denotes epidermis
T3746 176-189 GO:0008283 denotes proliferating
T3747 202-207 PR:000015308 denotes Snail
T3748 208-218 GO:0010467 denotes expression
T3749 247-253 _FRAGMENT denotes layers
T3750 259-266 UBERON:0002026 denotes spinous
T3751 354-363 PR:000009481 denotes keratin 5
T3752 365-367 PR:000009481 denotes K5
T3753 407-418 UBERON:0002025 denotes basal layer
T3754 459-464 PR:000015308 denotes Snail
T3755 470-474 NCBITaxon:10088 denotes mice
T3756 491-503 GO:0007369 denotes gastrulation
T3757 552-557 PR:000015308 denotes Snail
T3758 570-586 GO:0043588 denotes skin development
T3759 627-637 GO:0010467 denotes expression
T3760 641-646 PR:000015308 denotes Snail
T3761 676-678 PR:000009481 denotes K5
T3762 680-684 PR:000010425 denotes Ki67
T3763 696-708 UBERON:0010402 denotes suprabasally
R2287 T3750 T3749 _lexicallyChainedTo spinous,layers

2_test

Id Subject Object Predicate Lexical cue
15630473-11689706-84810262 505-507 11689706 denotes 21
T54526 505-507 11689706 denotes 21

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3851 0-10 GO:0010467 denotes Expression
T3852 18-23 PR_EXT:000015308 denotes Snail
T3853 24-33 SO_EXT:0000902 denotes transgene
T3854 57-72 GO_RO_EXT:developmental_differentiation_process denotes differentiation
T3855 85-98 GO_PATO_EXT:cell_proliferation_or_proliferativity denotes proliferative
T3856 99-108 UBERON:0007376 denotes epidermis
T3857 176-189 GO:0008283 denotes proliferating
T3858 202-207 PR_EXT:000015308 denotes Snail
T3859 208-218 GO:0010467 denotes expression
T3860 247-253 _FRAGMENT denotes layers
T3861 259-266 UBERON:0002026 denotes spinous
T3862 354-363 PR_EXT:000009481 denotes keratin 5
T3863 365-367 PR_EXT:000009481 denotes K5
T3864 407-418 UBERON:0002025 denotes basal layer
T3865 459-464 PR_EXT:000015308 denotes Snail
T3866 465-469 SO_EXT:sequence_nullness denotes null
T3867 470-474 NCBITaxon:10088 denotes mice
T3868 491-503 GO:0007369 denotes gastrulation
T3869 552-557 PR_EXT:000015308 denotes Snail
T3870 570-574 UBERON_EXT:zone_of_skin_or_skin_of_body denotes skin
T3871 570-586 GO:0043588 denotes skin development
T3872 627-637 GO:0010467 denotes expression
T3873 641-646 PR_EXT:000015308 denotes Snail
T3874 647-654 CHEBI_PR_EXT:protein denotes protein
T3875 676-678 PR_EXT:000009481 denotes K5
T3876 680-684 PR_EXT:000010425 denotes Ki67
T3877 696-708 UBERON:0010402 denotes suprabasally
R2288 T3861 T3860 _lexicallyChainedTo spinous,layers

craft-sa-dev

Id Subject Object Predicate Lexical cue
T4221 0-10 NN denotes Expression
T4222 42-47 VB denotes block
T4223 11-13 IN denotes of
T4224 14-17 DT denotes the
T4225 24-33 NN denotes transgene
T4226 18-23 NN denotes Snail
T4227 34-37 VBD denotes did
T4228 38-41 RB denotes not
T4229 48-56 JJ denotes terminal
T4230 57-72 NN denotes differentiation
T4231 73-75 IN denotes in
T4232 76-79 DT denotes the
T4233 99-108 NN denotes epidermis
T4234 80-98 JJ denotes hyperproliferative
T4235 108-110 , denotes ,
T4236 110-113 CC denotes but
T4237 114-116 PRP denotes it
T4238 117-126 VBD denotes distorted
T4239 127-129 PRP denotes it
T4240 130-138 RB denotes markedly
T4241 139-140 -LRB- denotes (
T4242 147-149 NN denotes 3A
T4243 140-146 NN denotes Figure
T4244 149-150 SYM denotes –
T4245 150-152 NN denotes 3H
T4246 152-153 -RRB- denotes )
T4247 153-154 . denotes .
T4248 154-291 sentence denotes Typical of most hyperproliferating conditions, Snail expression led to a large expansion in layers with spinous and granular morphology.
T4249 155-162 JJ denotes Typical
T4250 219-222 VBD denotes led
T4251 163-165 IN denotes of
T4252 166-170 JJS denotes most
T4253 190-200 NNS denotes conditions
T4254 171-189 NN denotes hyperproliferating
T4255 200-202 , denotes ,
T4256 202-207 NN denotes Snail
T4257 208-218 NN denotes expression
T4258 223-225 IN denotes to
T4259 226-227 DT denotes a
T4260 234-243 NN denotes expansion
T4261 228-233 JJ denotes large
T4262 244-246 IN denotes in
T4263 247-253 NNS denotes layers
T4264 254-258 IN denotes with
T4265 259-266 JJ denotes spinous
T4266 280-290 NN denotes morphology
T4267 267-270 CC denotes and
T4268 271-279 JJ denotes granular
T4269 290-291 . denotes .
T4270 291-434 sentence denotes Additionally, however, was a marked and variable expansion of keratin 5 (K5), normally restricted to the innermost basal layer (see Figure 3).
T4271 292-304 RB denotes Additionally
T4272 315-318 VBD denotes was
T4273 304-306 , denotes ,
T4274 306-313 RB denotes however
T4275 313-315 , denotes ,
T4276 319-320 DT denotes a
T4277 341-350 NN denotes expansion
T4278 321-327 JJ denotes marked
T4279 328-331 CC denotes and
T4280 332-340 JJ denotes variable
T4281 351-353 IN denotes of
T4282 354-361 NN denotes keratin
T4283 362-363 CD denotes 5
T4284 364-365 -LRB- denotes (
T4285 365-367 NN denotes K5
T4286 367-368 -RRB- denotes )
T4287 368-370 , denotes ,
T4288 370-378 RB denotes normally
T4289 379-389 VBN denotes restricted
T4290 390-392 IN denotes to
T4291 393-396 DT denotes the
T4292 413-418 NN denotes layer
T4293 397-406 JJS denotes innermost
T4294 407-412 JJ denotes basal
T4295 419-420 -LRB- denotes (
T4296 420-423 VB denotes see
T4297 424-430 NN denotes Figure
T4298 431-432 CD denotes 3
T4299 432-433 -RRB- denotes )
T4300 433-434 . denotes .
T4301 434-743 sentence denotes Although the failure of Snail-null mice to develop past gastrulation [21] precluded our ability to study the loss of Snail function in skin development, a good correlation emerged between the expression of Snail protein and the extension of K5, Ki67, and pMAPK suprabasally (compare data in Figures 2 and 3).
T4302 435-443 IN denotes Although
T4303 509-518 VBD denotes precluded
T4304 444-447 DT denotes the
T4305 448-455 NN denotes failure
T4306 456-458 IN denotes of
T4307 459-464 NN denotes Snail
T4308 470-474 NNS denotes mice
T4309 464-465 HYPH denotes -
T4310 465-469 JJ denotes null
T4311 475-477 TO denotes to
T4312 478-485 VB denotes develop
T4313 486-490 JJ denotes past
T4314 491-503 NN denotes gastrulation
T4315 504-505 -LRB- denotes [
T4316 505-507 CD denotes 21
T4317 507-508 -RRB- denotes ]
T4318 607-614 VBD denotes emerged
T4319 519-522 PRP$ denotes our
T4320 523-530 NN denotes ability
T4321 531-533 TO denotes to
T4322 534-539 VB denotes study
T4323 540-543 DT denotes the
T4324 544-548 NN denotes loss
T4325 549-551 IN denotes of
T4326 552-557 NN denotes Snail
T4327 558-566 NN denotes function
T4328 567-569 IN denotes in
T4329 570-574 NN denotes skin
T4330 575-586 NN denotes development
T4331 586-588 , denotes ,
T4332 588-589 DT denotes a
T4333 595-606 NN denotes correlation
T4334 590-594 JJ denotes good
T4335 615-622 IN denotes between
T4336 623-626 DT denotes the
T4337 627-637 NN denotes expression
T4338 638-640 IN denotes of
T4339 641-646 NN denotes Snail
T4340 647-654 NN denotes protein
T4341 655-658 CC denotes and
T4342 659-662 DT denotes the
T4343 663-672 NN denotes extension
T4344 673-675 IN denotes of
T4345 676-678 NN denotes K5
T4346 678-680 , denotes ,
T4347 680-684 NN denotes Ki67
T4348 684-686 , denotes ,
T4349 686-689 CC denotes and
T4350 690-695 NN denotes pMAPK
T4351 696-708 RB denotes suprabasally
T4352 709-710 -LRB- denotes (
T4353 710-717 VB denotes compare
T4354 718-722 NNS denotes data
T4355 723-725 IN denotes in
T4356 726-733 NNS denotes Figures
T4357 734-735 CD denotes 2
T4358 736-739 CC denotes and
T4359 740-741 CD denotes 3
T4360 741-742 -RRB- denotes )
T4361 742-743 . denotes .
R2576 T4221 T4222 nsubj Expression,block
R2577 T4223 T4221 prep of,Expression
R2578 T4224 T4225 det the,transgene
R2579 T4225 T4223 pobj transgene,of
R2580 T4226 T4225 compound Snail,transgene
R2581 T4227 T4222 aux did,block
R2582 T4228 T4222 neg not,block
R2583 T4229 T4230 amod terminal,differentiation
R2584 T4230 T4222 dobj differentiation,block
R2585 T4231 T4222 prep in,block
R2586 T4232 T4233 det the,epidermis
R2587 T4233 T4231 pobj epidermis,in
R2588 T4234 T4233 amod hyperproliferative,epidermis
R2589 T4235 T4222 punct ", ",block
R2590 T4236 T4222 cc but,block
R2591 T4237 T4238 nsubj it,distorted
R2592 T4238 T4222 conj distorted,block
R2593 T4239 T4238 dobj it,distorted
R2594 T4240 T4238 advmod markedly,distorted
R2595 T4241 T4242 punct (,3A
R2596 T4242 T4238 parataxis 3A,distorted
R2597 T4243 T4242 compound Figure,3A
R2598 T4244 T4245 punct –,3H
R2599 T4245 T4242 prep 3H,3A
R2600 T4246 T4242 punct ),3A
R2601 T4247 T4238 punct .,distorted
R2602 T4249 T4250 advcl Typical,led
R2603 T4251 T4249 prep of,Typical
R2604 T4252 T4253 amod most,conditions
R2605 T4253 T4251 pobj conditions,of
R2606 T4254 T4253 compound hyperproliferating,conditions
R2607 T4255 T4250 punct ", ",led
R2608 T4256 T4257 compound Snail,expression
R2609 T4257 T4250 nsubj expression,led
R2610 T4258 T4250 prep to,led
R2611 T4259 T4260 det a,expansion
R2612 T4260 T4258 pobj expansion,to
R2613 T4261 T4260 amod large,expansion
R2614 T4262 T4250 prep in,led
R2615 T4263 T4262 pobj layers,in
R2616 T4264 T4263 prep with,layers
R2617 T4265 T4266 amod spinous,morphology
R2618 T4266 T4264 pobj morphology,with
R2619 T4267 T4265 cc and,spinous
R2620 T4268 T4265 conj granular,spinous
R2621 T4269 T4250 punct .,led
R2622 T4271 T4272 advmod Additionally,was
R2623 T4273 T4272 punct ", ",was
R2624 T4274 T4272 advmod however,was
R2625 T4275 T4272 punct ", ",was
R2626 T4276 T4277 det a,expansion
R2627 T4277 T4272 attr expansion,was
R2628 T4278 T4277 amod marked,expansion
R2629 T4279 T4278 cc and,marked
R2630 T4280 T4278 conj variable,marked
R2631 T4281 T4277 prep of,expansion
R2632 T4282 T4281 pobj keratin,of
R2633 T4283 T4282 nummod 5,keratin
R2634 T4284 T4282 punct (,keratin
R2635 T4285 T4282 appos K5,keratin
R2636 T4286 T4282 punct ),keratin
R2637 T4287 T4282 punct ", ",keratin
R2638 T4288 T4289 advmod normally,restricted
R2639 T4289 T4282 acl restricted,keratin
R2640 T4290 T4289 prep to,restricted
R2641 T4291 T4292 det the,layer
R2642 T4292 T4290 pobj layer,to
R2643 T4293 T4292 amod innermost,layer
R2644 T4294 T4292 amod basal,layer
R2645 T4295 T4296 punct (,see
R2646 T4296 T4272 parataxis see,was
R2647 T4297 T4296 dobj Figure,see
R2648 T4298 T4297 nummod 3,Figure
R2649 T4299 T4296 punct ),see
R2650 T4300 T4272 punct .,was
R2651 T4302 T4303 mark Although,precluded
R2652 T4303 T4318 advcl precluded,emerged
R2653 T4304 T4305 det the,failure
R2654 T4305 T4303 nsubj failure,precluded
R2655 T4306 T4305 prep of,failure
R2656 T4307 T4308 nmod Snail,mice
R2657 T4308 T4306 pobj mice,of
R2658 T4309 T4307 punct -,Snail
R2659 T4310 T4307 amod null,Snail
R2660 T4311 T4312 aux to,develop
R2661 T4312 T4305 acl develop,failure
R2662 T4313 T4314 amod past,gastrulation
R2663 T4314 T4312 dobj gastrulation,develop
R2664 T4315 T4316 punct [,21
R2665 T4316 T4305 parataxis 21,failure
R2666 T4317 T4316 punct ],21
R2667 T4319 T4320 poss our,ability
R2668 T4320 T4303 dobj ability,precluded
R2669 T4321 T4322 aux to,study
R2670 T4322 T4320 acl study,ability
R2671 T4323 T4324 det the,loss
R2672 T4324 T4322 dobj loss,study
R2673 T4325 T4324 prep of,loss
R2674 T4326 T4327 compound Snail,function
R2675 T4327 T4325 pobj function,of
R2676 T4328 T4324 prep in,loss
R2677 T4329 T4330 compound skin,development
R2678 T4330 T4328 pobj development,in
R2679 T4331 T4318 punct ", ",emerged
R2680 T4332 T4333 det a,correlation
R2681 T4333 T4318 nsubj correlation,emerged
R2682 T4334 T4333 amod good,correlation
R2683 T4335 T4318 prep between,emerged
R2684 T4336 T4337 det the,expression
R2685 T4337 T4335 pobj expression,between
R2686 T4338 T4337 prep of,expression
R2687 T4339 T4340 compound Snail,protein
R2688 T4340 T4338 pobj protein,of
R2689 T4341 T4337 cc and,expression
R2690 T4342 T4343 det the,extension
R2691 T4343 T4337 conj extension,expression
R2692 T4344 T4343 prep of,extension
R2693 T4345 T4344 pobj K5,of
R2694 T4346 T4345 punct ", ",K5
R2695 T4347 T4345 conj Ki67,K5
R2696 T4348 T4347 punct ", ",Ki67
R2697 T4349 T4347 cc and,Ki67
R2698 T4350 T4347 conj pMAPK,Ki67
R2699 T4351 T4343 advmod suprabasally,extension
R2700 T4352 T4353 punct (,compare
R2701 T4353 T4318 parataxis compare,emerged
R2702 T4354 T4353 dobj data,compare
R2703 T4355 T4353 prep in,compare
R2704 T4356 T4357 nmod Figures,2
R2705 T4357 T4355 pobj 2,in
R2706 T4358 T4357 cc and,2
R2707 T4359 T4357 conj 3,2
R2708 T4360 T4353 punct ),compare
R2709 T4361 T4318 punct .,emerged