> top > docs > PMC:539061 > spans > 16573-17325 > annotations

PMC:539061 / 16573-17325 JSONTXT

Annnotations TAB JSON ListView MergeView

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3724 3-8 PR:000015308 denotes Snail
T3725 12-19 NCBITaxon:33208 denotes animals
T3726 20-24 GO:0040007 denotes grew
T3727 79-84 UBERON:0002415 denotes tails
T3728 152-156 NCBITaxon:10088 denotes mice
T3729 191-200 UBERON:0007376 denotes epidermal
T3730 280-285 PR:000015308 denotes Snail
T3731 332-342 GO:0010467 denotes expressing
T3732 343-350 GO:0005634 denotes nuclear
T3733 361-366 PR:000015308 denotes Snail
T3734 432-445 GO:0008283 denotes proliferation
T3735 462-472 GO:0042571 denotes antibodies
T3736 485-498 GO:0008283 denotes proliferating
T3737 499-506 GO:0005634 denotes nuclear
T3738 507-514 CHEBI:59132 denotes antigen
T3739 515-519 PR:000010425 denotes Ki67
T3740 641-651 GO:0010467 denotes expressing
T3741 688-705 UBERON:0010402 denotes suprabasal layers

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3823 3-8 PR_EXT:000015308 denotes Snail
T3824 9-11 SO_EXT:transgenic_entity denotes Tg
T3825 12-19 NCBITaxon:33208 denotes animals
T3826 20-24 GO:0040007 denotes grew
T3827 79-84 UBERON:0002415 denotes tails
T3828 96-100 UBERON_EXT:zone_of_skin_or_skin_of_body denotes skin
T3829 152-156 NCBITaxon:10088 denotes mice
T3830 191-200 UBERON:0007376 denotes epidermal
T3831 277-279 SO_EXT:transgenic_entity denotes Tg
T3832 280-285 PR_EXT:000015308 denotes Snail
T3833 286-293 CHEBI_PR_EXT:protein denotes protein
T3834 332-342 GO:0010467 denotes expressing
T3835 343-350 GO:0005634 denotes nuclear
T3836 354-360 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes tagged
T3837 361-366 PR_EXT:000015308 denotes Snail
T3838 432-445 GO:0008283 denotes proliferation
T3839 462-472 GO:0042571 denotes antibodies
T3840 485-498 GO:0008283 denotes proliferating
T3841 499-506 GO:0005634 denotes nuclear
T3842 507-514 CHEBI_EXT:59132 denotes antigen
T3843 515-519 PR_EXT:000010425 denotes Ki67
T3844 566-571 CL_GO_EXT:cell denotes cells
T3845 635-640 CL_GO_EXT:cell denotes cells
T3846 641-651 GO:0010467 denotes expressing
T3847 652-661 PR_EXT:keratin_6 denotes keratin 6
T3848 688-705 UBERON:0010402 denotes suprabasal layers
T3849 714-727 GO_PATO_EXT:cell_proliferation_or_proliferativity denotes proliferative
T3850 728-732 UBERON_EXT:zone_of_skin_or_skin_of_body denotes skin

craft-sa-dev

Id Subject Object Predicate Lexical cue
T4070 0-2 IN denotes As
T4071 20-24 VBD denotes grew
T4072 3-8 NN denotes Snail
T4073 12-19 NNS denotes animals
T4074 9-11 NN denotes Tg
T4075 31-37 VBD denotes became
T4076 24-26 , denotes ,
T4077 26-30 PRP denotes they
T4078 38-51 JJ denotes distinguished
T4079 52-54 IN denotes by
T4080 55-60 PRP$ denotes their
T4081 67-71 NN denotes size
T4082 61-66 JJ denotes small
T4083 71-73 , denotes ,
T4084 73-78 JJ denotes short
T4085 79-84 NNS denotes tails
T4086 84-86 , denotes ,
T4087 86-89 CC denotes and
T4088 90-95 JJ denotes flaky
T4089 96-100 NN denotes skin
T4090 101-102 -LRB- denotes (
T4091 109-111 NN denotes 2A
T4092 102-108 NN denotes Figure
T4093 111-112 -RRB- denotes )
T4094 112-113 . denotes .
T4095 113-224 sentence denotes Histological analyses of 3-d old (P3) mice revealed mosaic patches marked by epidermal thickening (Figure 2B).
T4096 114-126 JJ denotes Histological
T4097 127-135 NNS denotes analyses
T4098 157-165 VBD denotes revealed
T4099 136-138 IN denotes of
T4100 139-140 CD denotes 3
T4101 141-142 NN denotes d
T4102 140-141 HYPH denotes -
T4103 143-146 JJ denotes old
T4104 152-156 NNS denotes mice
T4105 147-148 -LRB- denotes (
T4106 148-150 JJ denotes P3
T4107 150-151 -RRB- denotes )
T4108 166-172 NN denotes mosaic
T4109 173-180 NNS denotes patches
T4110 181-187 VBN denotes marked
T4111 188-190 IN denotes by
T4112 191-200 JJ denotes epidermal
T4113 201-211 NN denotes thickening
T4114 212-213 -LRB- denotes (
T4115 220-222 NN denotes 2B
T4116 213-219 NN denotes Figure
T4117 222-223 -RRB- denotes )
T4118 223-224 . denotes .
T4119 224-379 sentence denotes The mosaic morphology was reflected at the level of Tg Snail protein, with only the hyperthickened regions expressing nuclear HA-tagged Snail (Figure 2C).
T4120 225-228 DT denotes The
T4121 236-246 NN denotes morphology
T4122 229-235 NN denotes mosaic
T4123 251-260 VBN denotes reflected
T4124 247-250 VBD denotes was
T4125 261-263 IN denotes at
T4126 264-267 DT denotes the
T4127 268-273 NN denotes level
T4128 274-276 IN denotes of
T4129 277-279 NN denotes Tg
T4130 286-293 NN denotes protein
T4131 280-285 NN denotes Snail
T4132 293-295 , denotes ,
T4133 295-299 IN denotes with
T4134 332-342 VBG denotes expressing
T4135 300-304 RB denotes only
T4136 324-331 NNS denotes regions
T4137 305-308 DT denotes the
T4138 309-323 VBN denotes hyperthickened
T4139 343-350 JJ denotes nuclear
T4140 361-366 NN denotes Snail
T4141 351-353 NN denotes HA
T4142 354-360 VBN denotes tagged
T4143 353-354 HYPH denotes -
T4144 367-368 -LRB- denotes (
T4145 375-377 NN denotes 2C
T4146 368-374 NN denotes Figure
T4147 377-378 -RRB- denotes )
T4148 378-379 . denotes .
T4149 379-539 sentence denotes These hyperthickened areas were marked by excessive proliferation, as revealed by antibodies against the proliferating nuclear antigen Ki67 (Figure 2D and 2E).
T4150 380-385 DT denotes These
T4151 401-406 NNS denotes areas
T4152 386-400 VBN denotes hyperthickened
T4153 412-418 VBN denotes marked
T4154 407-411 VBD denotes were
T4155 419-421 IN denotes by
T4156 422-431 JJ denotes excessive
T4157 432-445 NN denotes proliferation
T4158 445-447 , denotes ,
T4159 447-449 IN denotes as
T4160 450-458 VBN denotes revealed
T4161 459-461 IN denotes by
T4162 462-472 NNS denotes antibodies
T4163 473-480 IN denotes against
T4164 481-484 DT denotes the
T4165 507-514 NN denotes antigen
T4166 485-498 VBG denotes proliferating
T4167 499-506 JJ denotes nuclear
T4168 515-519 NN denotes Ki67
T4169 520-521 -LRB- denotes (
T4170 528-530 NN denotes 2D
T4171 521-527 NN denotes Figure
T4172 531-534 CC denotes and
T4173 535-537 NN denotes 2E
T4174 537-538 -RRB- denotes )
T4175 538-539 . denotes .
T4176 539-752 sentence denotes Activated, pMAPK-positive cells were also prevalent in these areas (Figure 2F and 2G), as were cells expressing keratin 6, a keratin induced in the suprabasal layers of hyperproliferative skin (Figure 2H and 2I).
T4177 540-549 VBN denotes Activated
T4178 566-571 NNS denotes cells
T4179 549-551 , denotes ,
T4180 551-556 NN denotes pMAPK
T4181 557-565 JJ denotes positive
T4182 556-557 HYPH denotes -
T4183 572-576 VBD denotes were
T4184 577-581 RB denotes also
T4185 582-591 JJ denotes prevalent
T4186 592-594 IN denotes in
T4187 595-600 DT denotes these
T4188 601-606 NNS denotes areas
T4189 607-608 -LRB- denotes (
T4190 615-617 NN denotes 2F
T4191 608-614 NN denotes Figure
T4192 618-621 CC denotes and
T4193 622-624 NN denotes 2G
T4194 624-625 -RRB- denotes )
T4195 625-627 , denotes ,
T4196 627-629 IN denotes as
T4197 630-634 VBD denotes were
T4198 635-640 NNS denotes cells
T4199 641-651 VBG denotes expressing
T4200 652-659 NN denotes keratin
T4201 660-661 CD denotes 6
T4202 661-663 , denotes ,
T4203 663-664 DT denotes a
T4204 665-672 NN denotes keratin
T4205 673-680 VBN denotes induced
T4206 681-683 IN denotes in
T4207 684-687 DT denotes the
T4208 699-705 NNS denotes layers
T4209 688-698 JJ denotes suprabasal
T4210 706-708 IN denotes of
T4211 709-727 JJ denotes hyperproliferative
T4212 728-732 NN denotes skin
T4213 733-734 -LRB- denotes (
T4214 741-743 NN denotes 2H
T4215 734-740 NN denotes Figure
T4216 744-747 CC denotes and
T4217 748-750 NN denotes 2I
T4218 750-751 -RRB- denotes )
T4219 751-752 . denotes .
R2435 T4070 T4071 mark As,grew
R2436 T4071 T4075 advcl grew,became
R2437 T4072 T4073 compound Snail,animals
R2438 T4073 T4071 nsubj animals,grew
R2439 T4074 T4073 compound Tg,animals
R2440 T4076 T4075 punct ", ",became
R2441 T4077 T4075 nsubj they,became
R2442 T4078 T4075 acomp distinguished,became
R2443 T4079 T4078 prep by,distinguished
R2444 T4080 T4081 poss their,size
R2445 T4081 T4079 pobj size,by
R2446 T4082 T4081 amod small,size
R2447 T4083 T4081 punct ", ",size
R2448 T4084 T4085 amod short,tails
R2449 T4085 T4081 conj tails,size
R2450 T4086 T4085 punct ", ",tails
R2451 T4087 T4085 cc and,tails
R2452 T4088 T4089 amod flaky,skin
R2453 T4089 T4085 conj skin,tails
R2454 T4090 T4091 punct (,2A
R2455 T4091 T4075 parataxis 2A,became
R2456 T4092 T4091 compound Figure,2A
R2457 T4093 T4091 punct ),2A
R2458 T4094 T4075 punct .,became
R2459 T4096 T4097 amod Histological,analyses
R2460 T4097 T4098 nsubj analyses,revealed
R2461 T4099 T4097 prep of,analyses
R2462 T4100 T4101 nummod 3,d
R2463 T4101 T4103 npadvmod d,old
R2464 T4102 T4101 punct -,d
R2465 T4103 T4104 amod old,mice
R2466 T4104 T4099 pobj mice,of
R2467 T4105 T4106 punct (,P3
R2468 T4106 T4103 parataxis P3,old
R2469 T4107 T4106 punct ),P3
R2470 T4108 T4109 compound mosaic,patches
R2471 T4109 T4098 dobj patches,revealed
R2472 T4110 T4109 acl marked,patches
R2473 T4111 T4110 agent by,marked
R2474 T4112 T4113 amod epidermal,thickening
R2475 T4113 T4111 pobj thickening,by
R2476 T4114 T4115 punct (,2B
R2477 T4115 T4098 parataxis 2B,revealed
R2478 T4116 T4115 compound Figure,2B
R2479 T4117 T4115 punct ),2B
R2480 T4118 T4098 punct .,revealed
R2481 T4120 T4121 det The,morphology
R2482 T4121 T4123 nsubjpass morphology,reflected
R2483 T4122 T4121 compound mosaic,morphology
R2484 T4124 T4123 auxpass was,reflected
R2485 T4125 T4123 prep at,reflected
R2486 T4126 T4127 det the,level
R2487 T4127 T4125 pobj level,at
R2488 T4128 T4127 prep of,level
R2489 T4129 T4130 compound Tg,protein
R2490 T4130 T4128 pobj protein,of
R2491 T4131 T4130 compound Snail,protein
R2492 T4132 T4123 punct ", ",reflected
R2493 T4133 T4134 mark with,expressing
R2494 T4134 T4123 advcl expressing,reflected
R2495 T4135 T4136 advmod only,regions
R2496 T4136 T4134 nsubj regions,expressing
R2497 T4137 T4136 det the,regions
R2498 T4138 T4136 amod hyperthickened,regions
R2499 T4139 T4140 amod nuclear,Snail
R2500 T4140 T4134 dobj Snail,expressing
R2501 T4141 T4142 npadvmod HA,tagged
R2502 T4142 T4140 amod tagged,Snail
R2503 T4143 T4142 punct -,tagged
R2504 T4144 T4145 punct (,2C
R2505 T4145 T4123 parataxis 2C,reflected
R2506 T4146 T4145 compound Figure,2C
R2507 T4147 T4145 punct ),2C
R2508 T4148 T4123 punct .,reflected
R2509 T4150 T4151 det These,areas
R2510 T4151 T4153 nsubjpass areas,marked
R2511 T4152 T4151 amod hyperthickened,areas
R2512 T4154 T4153 auxpass were,marked
R2513 T4155 T4153 agent by,marked
R2514 T4156 T4157 amod excessive,proliferation
R2515 T4157 T4155 pobj proliferation,by
R2516 T4158 T4153 punct ", ",marked
R2517 T4159 T4160 mark as,revealed
R2518 T4160 T4153 advcl revealed,marked
R2519 T4161 T4160 agent by,revealed
R2520 T4162 T4161 pobj antibodies,by
R2521 T4163 T4162 prep against,antibodies
R2522 T4164 T4165 det the,antigen
R2523 T4165 T4163 pobj antigen,against
R2524 T4166 T4165 amod proliferating,antigen
R2525 T4167 T4165 amod nuclear,antigen
R2526 T4168 T4165 appos Ki67,antigen
R2527 T4169 T4170 punct (,2D
R2528 T4170 T4153 parataxis 2D,marked
R2529 T4171 T4170 compound Figure,2D
R2530 T4172 T4170 cc and,2D
R2531 T4173 T4170 conj 2E,2D
R2532 T4174 T4170 punct ),2D
R2533 T4175 T4153 punct .,marked
R2534 T4177 T4178 amod Activated,cells
R2535 T4178 T4183 nsubj cells,were
R2536 T4179 T4178 punct ", ",cells
R2537 T4180 T4181 npadvmod pMAPK,positive
R2538 T4181 T4178 amod positive,cells
R2539 T4182 T4181 punct -,positive
R2540 T4184 T4183 advmod also,were
R2541 T4185 T4183 acomp prevalent,were
R2542 T4186 T4183 prep in,were
R2543 T4187 T4188 det these,areas
R2544 T4188 T4186 pobj areas,in
R2545 T4189 T4190 punct (,2F
R2546 T4190 T4183 parataxis 2F,were
R2547 T4191 T4190 compound Figure,2F
R2548 T4192 T4190 cc and,2F
R2549 T4193 T4190 conj 2G,2F
R2550 T4194 T4190 punct ),2F
R2551 T4195 T4183 punct ", ",were
R2552 T4196 T4197 mark as,were
R2553 T4197 T4183 advcl were,were
R2554 T4198 T4197 nsubj cells,were
R2555 T4199 T4198 acl expressing,cells
R2556 T4200 T4199 dobj keratin,expressing
R2557 T4201 T4200 nummod 6,keratin
R2558 T4202 T4200 punct ", ",keratin
R2559 T4203 T4204 det a,keratin
R2560 T4204 T4200 appos keratin,keratin
R2561 T4205 T4204 acl induced,keratin
R2562 T4206 T4205 prep in,induced
R2563 T4207 T4208 det the,layers
R2564 T4208 T4206 pobj layers,in
R2565 T4209 T4208 amod suprabasal,layers
R2566 T4210 T4208 prep of,layers
R2567 T4211 T4212 amod hyperproliferative,skin
R2568 T4212 T4210 pobj skin,of
R2569 T4213 T4214 punct (,2H
R2570 T4214 T4183 parataxis 2H,were
R2571 T4215 T4214 compound Figure,2H
R2572 T4216 T4214 cc and,2H
R2573 T4217 T4214 conj 2I,2H
R2574 T4218 T4214 punct ),2H
R2575 T4219 T4183 punct .,were