> top > docs > PMC:509410 > spans > 1341-2926 > annotations

PMC:509410 / 1341-2926 JSONTXT

Annnotations TAB JSON ListView MergeView

craft-sa-dev

Id Subject Object Predicate Lexical cue
T425 0-8 JJ denotes Skeletal
T426 16-22 NNS denotes fibers
T427 9-15 NN denotes muscle
T428 37-47 VBN denotes classified
T429 23-26 VBP denotes are
T430 27-36 RB denotes generally
T431 48-50 IN denotes as
T432 51-55 NN denotes type
T433 104-110 NNS denotes fibers
T434 56-57 CD denotes I
T435 58-59 -LRB- denotes (
T436 69-73 JJ denotes slow
T437 59-68 JJ denotes oxidative
T438 68-69 HYPH denotes /
T439 73-74 -RRB- denotes )
T440 75-77 CC denotes or
T441 78-82 NN denotes type
T442 83-85 CD denotes II
T443 86-87 -LRB- denotes (
T444 98-102 JJ denotes fast
T445 87-97 JJ denotes glycolytic
T446 97-98 HYPH denotes /
T447 102-103 -RRB- denotes )
T448 110-111 . denotes .
T449 111-213 sentence denotes They display marked differences in respect to contraction, metabolism, and susceptibility to fatigue.
T450 112-116 PRP denotes They
T451 117-124 VBP denotes display
T452 125-131 JJ denotes marked
T453 132-143 NNS denotes differences
T454 144-146 IN denotes in
T455 147-154 NN denotes respect
T456 155-157 IN denotes to
T457 158-169 NN denotes contraction
T458 169-171 , denotes ,
T459 171-181 NN denotes metabolism
T460 181-183 , denotes ,
T461 183-186 CC denotes and
T462 187-201 NN denotes susceptibility
T463 202-204 IN denotes to
T464 205-212 NN denotes fatigue
T465 212-213 . denotes .
T466 213-396 sentence denotes Type I fibers are mitochondria-rich and mainly use oxidative metabolism for energy production, which provides a stable and long-lasting supply of ATP, and thus are fatigue-resistant.
T467 214-218 NN denotes Type
T468 221-227 NNS denotes fibers
T469 219-220 CD denotes I
T470 228-231 VBP denotes are
T471 232-244 NNS denotes mitochondria
T472 245-249 JJ denotes rich
T473 244-245 HYPH denotes -
T474 250-253 CC denotes and
T475 254-260 RB denotes mainly
T476 261-264 VBP denotes use
T477 265-274 JJ denotes oxidative
T478 275-285 NN denotes metabolism
T479 286-289 IN denotes for
T480 290-296 NN denotes energy
T481 297-307 NN denotes production
T482 307-309 , denotes ,
T483 309-314 WDT denotes which
T484 315-323 VBZ denotes provides
T485 324-325 DT denotes a
T486 350-356 NN denotes supply
T487 326-332 JJ denotes stable
T488 333-336 CC denotes and
T489 337-341 JJ denotes long
T490 342-349 VBG denotes lasting
T491 341-342 HYPH denotes -
T492 357-359 IN denotes of
T493 360-363 NN denotes ATP
T494 363-365 , denotes ,
T495 365-368 CC denotes and
T496 369-373 RB denotes thus
T497 374-377 VBP denotes are
T498 378-385 NN denotes fatigue
T499 386-395 JJ denotes resistant
T500 385-386 HYPH denotes -
T501 395-396 . denotes .
T502 396-455 sentence denotes Type II fibers comprise three subtypes, IIa, IIx, and IIb.
T503 397-401 NN denotes Type
T504 405-411 NNS denotes fibers
T505 402-404 CD denotes II
T506 412-420 VBP denotes comprise
T507 421-426 CD denotes three
T508 427-435 NNS denotes subtypes
T509 435-437 , denotes ,
T510 437-440 NN denotes IIa
T511 440-442 , denotes ,
T512 442-445 NN denotes IIx
T513 445-447 , denotes ,
T514 447-450 CC denotes and
T515 451-454 NN denotes IIb
T516 454-455 . denotes .
T517 455-798 sentence denotes Type IIb fibers have the lowest levels of mitochondrial content and oxidative enzymes, rely on glycolytic metabolism as a major energy source, and are susceptible to fatigue, while the oxidative and contraction functions of type IIa and IIx lie between type I and IIb (Booth and Thomason 1991; Berchtold et al. 2000; Olson and Williams 2000).
T518 456-460 NN denotes Type
T519 461-464 NN denotes IIb
T520 465-471 NNS denotes fibers
T521 472-476 VBP denotes have
T522 477-480 DT denotes the
T523 488-494 NNS denotes levels
T524 481-487 JJS denotes lowest
T525 495-497 IN denotes of
T526 498-511 JJ denotes mitochondrial
T527 512-519 NN denotes content
T528 520-523 CC denotes and
T529 524-533 JJ denotes oxidative
T530 534-541 NNS denotes enzymes
T531 541-543 , denotes ,
T532 543-547 VBP denotes rely
T533 548-550 IN denotes on
T534 551-561 JJ denotes glycolytic
T535 562-572 NN denotes metabolism
T536 573-575 IN denotes as
T537 576-577 DT denotes a
T538 591-597 NN denotes source
T539 578-583 JJ denotes major
T540 584-590 NN denotes energy
T541 597-599 , denotes ,
T542 599-602 CC denotes and
T543 603-606 VBP denotes are
T544 607-618 JJ denotes susceptible
T545 619-621 IN denotes to
T546 622-629 NN denotes fatigue
T547 629-631 , denotes ,
T548 631-636 IN denotes while
T549 697-700 VBP denotes lie
T550 637-640 DT denotes the
T551 667-676 NNS denotes functions
T552 641-650 JJ denotes oxidative
T553 651-654 CC denotes and
T554 655-666 NN denotes contraction
T555 677-679 IN denotes of
T556 680-684 NN denotes type
T557 685-688 NN denotes IIa
T558 689-692 CC denotes and
T559 693-696 NN denotes IIx
T560 701-708 IN denotes between
T561 709-713 NN denotes type
T562 720-723 NN denotes IIb
T563 714-715 CD denotes I
T564 716-719 CC denotes and
T565 724-725 -LRB- denotes (
T566 725-730 NNP denotes Booth
T567 731-734 CC denotes and
T568 735-743 NNP denotes Thomason
T569 744-748 CD denotes 1991
T570 748-749 : denotes ;
T571 750-759 NNP denotes Berchtold
T572 760-762 FW denotes et
T573 763-766 FW denotes al.
T574 767-771 CD denotes 2000
T575 771-772 : denotes ;
T576 773-778 NNP denotes Olson
T577 779-782 CC denotes and
T578 783-791 NNP denotes Williams
T579 792-796 CD denotes 2000
T580 796-797 -RRB- denotes )
T581 797-798 . denotes .
T582 798-1059 sentence denotes Adult skeletal muscle shows plasticity and can undergo conversion between different fiber types in response to exercise training or modulation of motoneuron activity (Booth and Thomason 1991, Jarvis et al. 1996; Pette 1998; Olson and Williams 2000; Hood 2001).
T583 799-804 JJ denotes Adult
T584 814-820 NN denotes muscle
T585 805-813 JJ denotes skeletal
T586 821-826 VBZ denotes shows
T587 827-837 NN denotes plasticity
T588 838-841 CC denotes and
T589 842-845 MD denotes can
T590 846-853 VB denotes undergo
T591 854-864 NN denotes conversion
T592 865-872 IN denotes between
T593 873-882 JJ denotes different
T594 889-894 NNS denotes types
T595 883-888 NN denotes fiber
T596 895-897 IN denotes in
T597 898-906 NN denotes response
T598 907-909 IN denotes to
T599 910-918 NN denotes exercise
T600 919-927 NN denotes training
T601 928-930 CC denotes or
T602 931-941 NN denotes modulation
T603 942-944 IN denotes of
T604 945-955 NN denotes motoneuron
T605 956-964 NN denotes activity
T606 965-966 -LRB- denotes (
T607 966-971 NNP denotes Booth
T608 972-975 CC denotes and
T609 976-984 NNP denotes Thomason
T610 985-989 CD denotes 1991
T611 989-991 , denotes ,
T612 991-997 NNP denotes Jarvis
T613 998-1000 FW denotes et
T614 1001-1004 FW denotes al.
T615 1005-1009 CD denotes 1996
T616 1009-1010 : denotes ;
T617 1011-1016 NNP denotes Pette
T618 1017-1021 CD denotes 1998
T619 1021-1022 : denotes ;
T620 1023-1028 NNP denotes Olson
T621 1029-1032 CC denotes and
T622 1033-1041 NNP denotes Williams
T623 1042-1046 CD denotes 2000
T624 1046-1047 : denotes ;
T625 1048-1052 NNP denotes Hood
T626 1053-1057 CD denotes 2001
T627 1057-1058 -RRB- denotes )
T628 1058-1059 . denotes .
T629 1059-1424 sentence denotes This conversion of muscle fiber from type IIb to type IIa and type I is likely to be mediated by a calcium signaling pathway that involves calcineurin, calmodulin-dependent kinase, and the transcriptional cofactor Peroxisome proliferator-activated receptor-gamma coactivator 1α (PGC-1α) (Naya et al. 2000; Olson and Williams 2000; Lin et al. 2002; Wu et al. 2002).
T630 1060-1064 DT denotes This
T631 1065-1075 NN denotes conversion
T632 1129-1131 VBZ denotes is
T633 1076-1078 IN denotes of
T634 1079-1085 NN denotes muscle
T635 1086-1091 NN denotes fiber
T636 1092-1096 IN denotes from
T637 1097-1101 NN denotes type
T638 1102-1105 NN denotes IIb
T639 1106-1108 IN denotes to
T640 1109-1113 NN denotes type
T641 1114-1117 NN denotes IIa
T642 1118-1121 CC denotes and
T643 1122-1126 NN denotes type
T644 1127-1128 CD denotes I
T645 1132-1138 JJ denotes likely
T646 1139-1141 TO denotes to
T647 1145-1153 VBN denotes mediated
T648 1142-1144 VB denotes be
T649 1154-1156 IN denotes by
T650 1157-1158 DT denotes a
T651 1177-1184 NN denotes pathway
T652 1159-1166 NN denotes calcium
T653 1167-1176 NN denotes signaling
T654 1185-1189 WDT denotes that
T655 1190-1198 VBZ denotes involves
T656 1199-1210 NN denotes calcineurin
T657 1210-1212 , denotes ,
T658 1212-1222 NN denotes calmodulin
T659 1223-1232 JJ denotes dependent
T660 1222-1223 HYPH denotes -
T661 1233-1239 NN denotes kinase
T662 1239-1241 , denotes ,
T663 1241-1244 CC denotes and
T664 1245-1248 DT denotes the
T665 1265-1273 NN denotes cofactor
T666 1249-1264 JJ denotes transcriptional
T667 1274-1284 NN denotes Peroxisome
T668 1285-1297 NN denotes proliferator
T669 1298-1307 VBN denotes activated
T670 1297-1298 HYPH denotes -
T671 1308-1316 NN denotes receptor
T672 1323-1334 NN denotes coactivator
T673 1316-1317 HYPH denotes -
T674 1317-1322 NN denotes gamma
T675 1335-1337 CD denotes 1α
T676 1338-1339 -LRB- denotes (
T677 1339-1342 NN denotes PGC
T678 1343-1345 NN denotes 1α
T679 1342-1343 HYPH denotes -
T680 1345-1346 -RRB- denotes )
T681 1347-1348 -LRB- denotes (
T682 1348-1352 NNP denotes Naya
T683 1353-1355 FW denotes et
T684 1356-1359 FW denotes al.
T685 1360-1364 CD denotes 2000
T686 1364-1365 : denotes ;
T687 1366-1371 NNP denotes Olson
T688 1372-1375 CC denotes and
T689 1376-1384 NNP denotes Williams
T690 1385-1389 CD denotes 2000
T691 1389-1390 : denotes ;
T692 1391-1394 NNP denotes Lin
T693 1395-1397 FW denotes et
T694 1398-1401 FW denotes al.
T695 1402-1406 CD denotes 2002
T696 1406-1407 : denotes ;
T697 1408-1410 NNP denotes Wu
T698 1411-1413 FW denotes et
T699 1414-1417 FW denotes al.
T700 1418-1422 CD denotes 2002
T701 1422-1423 -RRB- denotes )
T702 1423-1424 . denotes .
T703 1424-1585 sentence denotes However, the targeted transcriptional factors directly responsible for reprogramming the fiber-specific contractile and metabolic genes remain to be identified.
T704 1425-1432 RB denotes However
T705 1561-1567 VBP denotes remain
T706 1432-1434 , denotes ,
T707 1434-1437 DT denotes the
T708 1463-1470 NNS denotes factors
T709 1438-1446 VBN denotes targeted
T710 1447-1462 JJ denotes transcriptional
T711 1471-1479 RB denotes directly
T712 1480-1491 JJ denotes responsible
T713 1492-1495 IN denotes for
T714 1496-1509 VBG denotes reprogramming
T715 1510-1513 DT denotes the
T716 1555-1560 NNS denotes genes
T717 1514-1519 NN denotes fiber
T718 1520-1528 JJ denotes specific
T719 1519-1520 HYPH denotes -
T720 1529-1540 JJ denotes contractile
T721 1541-1544 CC denotes and
T722 1545-1554 JJ denotes metabolic
T723 1568-1570 TO denotes to
T724 1574-1584 VBN denotes identified
T725 1571-1573 VB denotes be
T726 1584-1585 . denotes .
R190 T425 T426 amod Skeletal,fibers
R191 T426 T428 nsubjpass fibers,classified
R192 T427 T426 compound muscle,fibers
R193 T429 T428 auxpass are,classified
R194 T430 T428 advmod generally,classified
R195 T431 T428 prep as,classified
R196 T432 T433 nmod type,fibers
R197 T433 T431 pobj fibers,as
R198 T434 T432 nummod I,type
R199 T435 T436 punct (,slow
R200 T436 T432 parataxis slow,type
R201 T437 T436 amod oxidative,slow
R202 T438 T436 punct /,slow
R203 T439 T436 punct ),slow
R204 T440 T432 cc or,type
R205 T441 T432 conj type,type
R206 T442 T441 nummod II,type
R207 T443 T444 punct (,fast
R208 T444 T441 parataxis fast,type
R209 T445 T444 amod glycolytic,fast
R210 T446 T444 punct /,fast
R211 T447 T444 punct ),fast
R212 T448 T428 punct .,classified
R213 T450 T451 nsubj They,display
R214 T452 T453 amod marked,differences
R215 T453 T451 dobj differences,display
R216 T454 T451 prep in,display
R217 T455 T454 pobj respect,in
R218 T456 T455 prep to,respect
R219 T457 T456 pobj contraction,to
R220 T458 T457 punct ", ",contraction
R221 T459 T457 conj metabolism,contraction
R222 T460 T459 punct ", ",metabolism
R223 T461 T459 cc and,metabolism
R224 T462 T459 conj susceptibility,metabolism
R225 T463 T462 prep to,susceptibility
R226 T464 T463 pobj fatigue,to
R227 T465 T451 punct .,display
R228 T467 T468 nmod Type,fibers
R229 T468 T470 nsubj fibers,are
R230 T469 T467 nummod I,Type
R231 T471 T472 npadvmod mitochondria,rich
R232 T472 T470 acomp rich,are
R233 T473 T472 punct -,rich
R234 T474 T470 cc and,are
R235 T475 T476 advmod mainly,use
R236 T476 T470 conj use,are
R237 T477 T478 amod oxidative,metabolism
R238 T478 T476 dobj metabolism,use
R239 T479 T476 prep for,use
R240 T480 T481 compound energy,production
R241 T481 T479 pobj production,for
R242 T482 T476 punct ", ",use
R243 T483 T484 dep which,provides
R244 T484 T476 ccomp provides,use
R245 T485 T486 det a,supply
R246 T486 T484 dobj supply,provides
R247 T487 T486 amod stable,supply
R248 T488 T487 cc and,stable
R249 T489 T490 amod long,lasting
R250 T490 T487 conj lasting,stable
R251 T491 T490 punct -,lasting
R252 T492 T486 prep of,supply
R253 T493 T492 pobj ATP,of
R254 T494 T476 punct ", ",use
R255 T495 T476 cc and,use
R256 T496 T497 advmod thus,are
R257 T497 T476 conj are,use
R258 T498 T499 npadvmod fatigue,resistant
R259 T499 T497 acomp resistant,are
R260 T500 T499 punct -,resistant
R261 T501 T470 punct .,are
R262 T503 T504 nmod Type,fibers
R263 T504 T506 nsubj fibers,comprise
R264 T505 T503 nummod II,Type
R265 T507 T508 nummod three,subtypes
R266 T508 T506 dobj subtypes,comprise
R267 T509 T508 punct ", ",subtypes
R268 T510 T508 appos IIa,subtypes
R269 T511 T510 punct ", ",IIa
R270 T512 T510 conj IIx,IIa
R271 T513 T512 punct ", ",IIx
R272 T514 T512 cc and,IIx
R273 T515 T512 conj IIb,IIx
R274 T516 T506 punct .,comprise
R275 T518 T519 compound Type,IIb
R276 T519 T520 compound IIb,fibers
R277 T520 T521 nsubj fibers,have
R278 T522 T523 det the,levels
R279 T523 T521 dobj levels,have
R280 T524 T523 amod lowest,levels
R281 T525 T523 prep of,levels
R282 T526 T527 amod mitochondrial,content
R283 T527 T525 pobj content,of
R284 T528 T527 cc and,content
R285 T529 T530 amod oxidative,enzymes
R286 T530 T527 conj enzymes,content
R287 T531 T521 punct ", ",have
R288 T532 T521 conj rely,have
R289 T533 T532 prep on,rely
R290 T534 T535 amod glycolytic,metabolism
R291 T535 T533 pobj metabolism,on
R292 T536 T532 prep as,rely
R293 T537 T538 det a,source
R294 T538 T536 pobj source,as
R295 T539 T538 amod major,source
R296 T540 T538 compound energy,source
R297 T541 T532 punct ", ",rely
R298 T542 T532 cc and,rely
R299 T543 T532 conj are,rely
R300 T544 T543 acomp susceptible,are
R301 T545 T544 prep to,susceptible
R302 T546 T545 pobj fatigue,to
R303 T547 T521 punct ", ",have
R304 T548 T549 mark while,lie
R305 T549 T521 advcl lie,have
R306 T550 T551 det the,functions
R307 T551 T549 nsubj functions,lie
R308 T552 T551 amod oxidative,functions
R309 T553 T552 cc and,oxidative
R310 T554 T552 conj contraction,oxidative
R311 T555 T551 prep of,functions
R312 T556 T557 compound type,IIa
R313 T557 T555 pobj IIa,of
R314 T558 T557 cc and,IIa
R315 T559 T557 conj IIx,IIa
R316 T560 T549 prep between,lie
R317 T561 T562 nmod type,IIb
R318 T562 T560 pobj IIb,between
R319 T563 T562 nummod I,IIb
R320 T564 T562 cc and,IIb
R321 T565 T566 punct (,Booth
R322 T566 T549 meta Booth,lie
R323 T567 T566 cc and,Booth
R324 T568 T566 conj Thomason,Booth
R325 T569 T568 nummod 1991,Thomason
R326 T570 T568 punct ;,Thomason
R327 T571 T568 conj Berchtold,Thomason
R328 T572 T571 nmod et,Berchtold
R329 T573 T571 nmod al.,Berchtold
R330 T574 T571 nummod 2000,Berchtold
R331 T575 T571 punct ;,Berchtold
R332 T576 T571 conj Olson,Berchtold
R333 T577 T576 cc and,Olson
R334 T578 T576 conj Williams,Olson
R335 T579 T578 nummod 2000,Williams
R336 T580 T578 punct ),Williams
R337 T581 T521 punct .,have
R338 T583 T584 amod Adult,muscle
R339 T584 T586 nsubj muscle,shows
R340 T585 T584 amod skeletal,muscle
R341 T587 T586 dobj plasticity,shows
R342 T588 T586 cc and,shows
R343 T589 T590 aux can,undergo
R344 T590 T586 conj undergo,shows
R345 T591 T590 dobj conversion,undergo
R346 T592 T591 prep between,conversion
R347 T593 T594 amod different,types
R348 T594 T592 pobj types,between
R349 T595 T594 compound fiber,types
R350 T596 T590 prep in,undergo
R351 T597 T596 pobj response,in
R352 T598 T597 prep to,response
R353 T599 T600 compound exercise,training
R354 T600 T598 pobj training,to
R355 T601 T600 cc or,training
R356 T602 T600 conj modulation,training
R357 T603 T602 prep of,modulation
R358 T604 T605 compound motoneuron,activity
R359 T605 T603 pobj activity,of
R360 T606 T607 punct (,Booth
R361 T607 T590 meta Booth,undergo
R362 T608 T607 cc and,Booth
R363 T609 T607 conj Thomason,Booth
R364 T610 T609 nummod 1991,Thomason
R365 T611 T609 punct ", ",Thomason
R366 T612 T609 conj Jarvis,Thomason
R367 T613 T612 nmod et,Jarvis
R368 T614 T612 nmod al.,Jarvis
R369 T615 T612 nummod 1996,Jarvis
R370 T616 T612 punct ;,Jarvis
R371 T617 T612 conj Pette,Jarvis
R372 T618 T617 nummod 1998,Pette
R373 T619 T617 punct ;,Pette
R374 T620 T617 conj Olson,Pette
R375 T621 T620 cc and,Olson
R376 T622 T620 conj Williams,Olson
R377 T623 T622 nummod 2000,Williams
R378 T624 T622 punct ;,Williams
R379 T625 T622 conj Hood,Williams
R380 T626 T625 nummod 2001,Hood
R381 T627 T625 punct ),Hood
R382 T628 T586 punct .,shows
R383 T630 T631 det This,conversion
R384 T631 T632 nsubj conversion,is
R385 T633 T631 prep of,conversion
R386 T634 T635 compound muscle,fiber
R387 T635 T633 pobj fiber,of
R388 T636 T631 prep from,conversion
R389 T637 T638 compound type,IIb
R390 T638 T636 pobj IIb,from
R391 T639 T631 prep to,conversion
R392 T640 T641 compound type,IIa
R393 T641 T639 pobj IIa,to
R394 T642 T641 cc and,IIa
R395 T643 T641 conj type,IIa
R396 T644 T643 nummod I,type
R397 T645 T632 acomp likely,is
R398 T646 T647 aux to,mediated
R399 T647 T645 xcomp mediated,likely
R400 T648 T647 auxpass be,mediated
R401 T649 T647 agent by,mediated
R402 T650 T651 det a,pathway
R403 T651 T649 pobj pathway,by
R404 T652 T651 compound calcium,pathway
R405 T653 T651 compound signaling,pathway
R406 T654 T655 dep that,involves
R407 T655 T651 relcl involves,pathway
R408 T656 T655 dobj calcineurin,involves
R409 T657 T656 punct ", ",calcineurin
R410 T658 T659 npadvmod calmodulin,dependent
R411 T659 T661 amod dependent,kinase
R412 T660 T659 punct -,dependent
R413 T661 T656 conj kinase,calcineurin
R414 T662 T661 punct ", ",kinase
R415 T663 T661 cc and,kinase
R416 T664 T665 det the,cofactor
R417 T665 T661 conj cofactor,kinase
R418 T666 T665 amod transcriptional,cofactor
R419 T667 T668 compound Peroxisome,proliferator
R420 T668 T669 npadvmod proliferator,activated
R421 T669 T671 amod activated,receptor
R422 T670 T669 punct -,activated
R423 T671 T672 compound receptor,coactivator
R424 T672 T665 appos coactivator,cofactor
R425 T673 T672 punct -,coactivator
R426 T674 T672 compound gamma,coactivator
R427 T675 T672 nummod 1α,coactivator
R428 T676 T672 punct (,coactivator
R429 T677 T678 compound PGC,1α
R430 T678 T672 appos 1α,coactivator
R431 T679 T678 punct -,1α
R432 T680 T672 punct ),coactivator
R433 T681 T682 punct (,Naya
R434 T682 T655 meta Naya,involves
R435 T683 T682 nmod et,Naya
R436 T684 T682 nmod al.,Naya
R437 T685 T682 nummod 2000,Naya
R438 T686 T682 punct ;,Naya
R439 T687 T682 conj Olson,Naya
R440 T688 T687 cc and,Olson
R441 T689 T687 conj Williams,Olson
R442 T690 T689 nummod 2000,Williams
R443 T691 T689 punct ;,Williams
R444 T692 T689 conj Lin,Williams
R445 T693 T692 nmod et,Lin
R446 T694 T692 nmod al.,Lin
R447 T695 T692 nummod 2002,Lin
R448 T696 T692 punct ;,Lin
R449 T697 T692 conj Wu,Lin
R450 T698 T697 nmod et,Wu
R451 T699 T697 nmod al.,Wu
R452 T700 T697 nummod 2002,Wu
R453 T701 T697 punct ),Wu
R454 T702 T632 punct .,is
R455 T704 T705 advmod However,remain
R456 T706 T705 punct ", ",remain
R457 T707 T708 det the,factors
R458 T708 T705 nsubj factors,remain
R459 T709 T708 amod targeted,factors
R460 T710 T708 amod transcriptional,factors
R461 T711 T712 advmod directly,responsible
R462 T712 T708 amod responsible,factors
R463 T713 T712 prep for,responsible
R464 T714 T713 pcomp reprogramming,for
R465 T715 T716 det the,genes
R466 T716 T714 dobj genes,reprogramming
R467 T717 T718 npadvmod fiber,specific
R468 T718 T716 amod specific,genes
R469 T719 T718 punct -,specific
R470 T720 T716 amod contractile,genes
R471 T721 T720 cc and,contractile
R472 T722 T720 conj metabolic,contractile
R473 T723 T724 aux to,identified
R474 T724 T705 xcomp identified,remain
R475 T725 T724 auxpass be,identified
R476 T726 T705 punct .,remain

2_test

Id Subject Object Predicate Lexical cue
15328533-2006222-84708255 744-748 2006222 denotes 1991
15328533-10893434-84708256 767-771 10893434 denotes 2000
15328533-10842305-84708257 792-796 10842305 denotes 2000
15328533-2006222-84708258 985-989 2006222 denotes 1991
15328533-8874405-84708259 1005-1009 8874405 denotes 1996
15328533-9578383-84708260 1017-1021 9578383 denotes 1998
15328533-10842305-84708261 1042-1046 10842305 denotes 2000
15328533-11181630-84708262 1053-1057 11181630 denotes 2001
15328533-10671477-84708263 1360-1364 10671477 denotes 2000
15328533-10842305-84708264 1385-1389 10842305 denotes 2000
15328533-12181572-84708265 1402-1406 12181572 denotes 2002
15328533-11951046-84708266 1418-1422 11951046 denotes 2002
T61226 744-748 2006222 denotes 1991
T75954 767-771 10893434 denotes 2000
T88192 792-796 10842305 denotes 2000
T35458 985-989 2006222 denotes 1991
T69012 1005-1009 8874405 denotes 1996
T7969 1017-1021 9578383 denotes 1998
T664 1042-1046 10842305 denotes 2000
T9685 1053-1057 11181630 denotes 2001
T97577 1360-1364 10671477 denotes 2000
T66910 1385-1389 10842305 denotes 2000
T19489 1402-1406 12181572 denotes 2002
T9846 1418-1422 11951046 denotes 2002

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T324 0-15 UBERON_EXT:skeletal_muscle_organ_or_tissue denotes Skeletal muscle
T325 0-22 CL:0008002 denotes Skeletal muscle fibers
T326 51-57 _FRAGMENT denotes type I
T327 104-110 CL:0002211 denotes fibers
T328 59-68 MOP:0000568 denotes oxidative
T329 59-68 _FRAGMENT denotes oxidative
T330 104-110 CL:0002210 denotes fibers
T331 69-73 _FRAGMENT denotes slow
T332 104-110 CL:0000189 denotes fibers
T333 78-85 _FRAGMENT denotes type II
T334 104-110 CL:0002212 denotes fibers
T335 87-97 GO:0006096 denotes glycolytic
T336 87-97 _FRAGMENT denotes glycolytic
T337 104-110 CL:0000190 denotes fibers
T338 98-102 _FRAGMENT denotes fast
T339 158-169 GO:0006936 denotes contraction
T340 171-181 GO:0008152 denotes metabolism
T341 214-227 CL:0002211 denotes Type I fibers
T342 232-244 GO:0005739 denotes mitochondria
T343 265-274 MOP:0000568 denotes oxidative
T344 265-285 GO:0045333 denotes oxidative metabolism
T345 360-363 CHEBI_EXT:ATP denotes ATP
T346 397-411 CL:0002212 denotes Type II fibers
T347 437-440 CL:0002214 denotes IIa
T348 451-454 CL:0002215 denotes IIb
T349 456-471 CL:0002215 denotes Type IIb fibers
T350 498-511 GO:0005739 denotes mitochondrial
T351 524-533 MOP:0000568 denotes oxidative
T352 534-541 CHEBI_GO_SO_EXT:enzyme denotes enzymes
T353 551-572 GO:0006096 denotes glycolytic metabolism
T354 641-650 MOP:0000568 denotes oxidative
T355 655-666 GO:0006936 denotes contraction
T356 680-688 CL:0002214 denotes type IIa
T357 709-715 CL:0002211 denotes type I
T358 709-713 _FRAGMENT denotes type
T359 720-723 CL:0002215 denotes IIb
T360 799-804 UBERON:0007023 denotes Adult
T361 805-820 UBERON_EXT:skeletal_muscle_organ_or_tissue denotes skeletal muscle
T362 898-906 GO_EXT:reaction_or_response denotes response
T363 931-941 GO:0065007 denotes modulation
T364 945-955 CL:0000100 denotes motoneuron
T365 1079-1085 UBERON_EXT:muscle_structure_or_tissue denotes muscle
T366 1079-1091 CL:0000187 denotes muscle fiber
T367 1097-1105 CL:0002215 denotes type IIb
T370 1159-1166 CHEBI_EXT:calcium denotes calcium
T371 1159-1184 GO:0019722 denotes calcium signaling pathway
T372 1199-1210 GO_PR_EXT:calcineurin denotes calcineurin
T373 1212-1222 PR_EXT:000004978 denotes calmodulin
T374 1212-1239 GO_EXT:0004683 denotes calmodulin-dependent kinase
T375 1249-1264 GO_EXT:transcription denotes transcriptional
T376 1249-1273 GO_EXT:0003712 denotes transcriptional cofactor
T377 1265-1273 CHEBI_EXT:23357 denotes cofactor
T378 1274-1284 GO:0005777 denotes Peroxisome
T379 1274-1337 PR_EXT:000013059 denotes Peroxisome proliferator-activated receptor-gamma coactivator 1α
T380 1308-1316 GO_EXT:0004872 denotes receptor
T381 1339-1345 PR_EXT:000013059 denotes PGC-1α
T382 1447-1462 GO_EXT:transcription denotes transcriptional
T383 1447-1470 GO_EXT:transcription_factor denotes transcriptional factors
T384 1529-1540 GO:0006936 denotes contractile
T385 1545-1554 GO:0008152 denotes metabolic
T386 1555-1560 SO_EXT:0000704 denotes genes
T368 1109-1117 CL:0002214 denotes type IIa
T369 1122-1128 CL:0002211 denotes type I
R180 T327 T326 _lexicallyChainedTo fibers,type I
R181 T330 T329 _lexicallyChainedTo fibers,oxidative
R182 T332 T331 _lexicallyChainedTo fibers,slow
R183 T334 T333 _lexicallyChainedTo fibers,type II
R184 T337 T336 _lexicallyChainedTo fibers,glycolytic
R185 T337 T338 _lexicallyChainedTo fibers,fast
R186 T359 T358 _lexicallyChainedTo IIb,type

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T247 0-8 UBERON:0004288 denotes Skeletal
T248 0-22 CL:0008002 denotes Skeletal muscle fibers
T249 51-57 _FRAGMENT denotes type I
T250 104-110 CL:0002211 denotes fibers
T251 59-68 MOP:0000568 denotes oxidative
T252 59-68 _FRAGMENT denotes oxidative
T253 104-110 CL:0002210 denotes fibers
T254 69-73 _FRAGMENT denotes slow
T255 104-110 CL:0000189 denotes fibers
T256 78-85 _FRAGMENT denotes type II
T257 104-110 CL:0002212 denotes fibers
T258 87-97 GO:0006096 denotes glycolytic
T259 87-97 _FRAGMENT denotes glycolytic
T260 104-110 CL:0000190 denotes fibers
T261 98-102 _FRAGMENT denotes fast
T262 158-169 GO:0006936 denotes contraction
T263 171-181 GO:0008152 denotes metabolism
T264 214-227 CL:0002211 denotes Type I fibers
T265 232-244 GO:0005739 denotes mitochondria
T266 265-274 MOP:0000568 denotes oxidative
T267 265-285 GO:0045333 denotes oxidative metabolism
T268 397-411 CL:0002212 denotes Type II fibers
T269 437-440 CL:0002214 denotes IIa
T270 451-454 CL:0002215 denotes IIb
T271 456-471 CL:0002215 denotes Type IIb fibers
T272 498-511 GO:0005739 denotes mitochondrial
T273 524-533 MOP:0000568 denotes oxidative
T274 551-572 GO:0006096 denotes glycolytic metabolism
T275 641-650 MOP:0000568 denotes oxidative
T276 655-666 GO:0006936 denotes contraction
T277 680-688 CL:0002214 denotes type IIa
T278 709-715 CL:0002211 denotes type I
T279 709-713 _FRAGMENT denotes type
T280 720-723 CL:0002215 denotes IIb
T281 799-804 UBERON:0007023 denotes Adult
T282 805-813 UBERON:0004288 denotes skeletal
T283 931-941 GO:0065007 denotes modulation
T284 945-955 CL:0000100 denotes motoneuron
T285 1079-1091 CL:0000187 denotes muscle fiber
T286 1097-1105 CL:0002215 denotes type IIb
T287 1109-1117 CL:0002214 denotes type IIa
T288 1122-1128 CL:0002211 denotes type I
T289 1159-1184 GO:0019722 denotes calcium signaling pathway
T290 1212-1222 PR:000004978 denotes calmodulin
T291 1265-1273 CHEBI:23357 denotes cofactor
T292 1274-1284 GO:0005777 denotes Peroxisome
T293 1274-1337 PR:000013059 denotes Peroxisome proliferator-activated receptor-gamma coactivator 1α
T294 1339-1345 PR:000013059 denotes PGC-1α
T295 1529-1540 GO:0006936 denotes contractile
T296 1545-1554 GO:0008152 denotes metabolic
T297 1555-1560 SO:0000704 denotes genes
R170 T250 T249 _lexicallyChainedTo fibers,type I
R171 T253 T252 _lexicallyChainedTo fibers,oxidative
R172 T255 T254 _lexicallyChainedTo fibers,slow
R173 T257 T256 _lexicallyChainedTo fibers,type II
R174 T260 T259 _lexicallyChainedTo fibers,glycolytic
R175 T260 T261 _lexicallyChainedTo fibers,fast
R176 T280 T279 _lexicallyChainedTo IIb,type