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PMC:509305 / 15925-17024 JSONTXT

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craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6620 802-806 NCBITaxon:10088 denotes mice
T6619 713-718 SO:0000704 denotes genes
T6618 630-637 SO:0001023 denotes alleles
T6617 477-484 SO:0000704 denotes genetic
T6616 430-436 UBERON:0002405 denotes immune
T6615 358-367 GO:0000785 denotes chromatin
T6614 168-175 SO:0001026 denotes genomic
T6613 99-105 UBERON:0002405 denotes immune

craft-sa-dev

Id Subject Object Predicate Lexical cue
T7576 1098-1099 . denotes .
T7575 1095-1098 CD denotes 6.4
T7574 1091-1094 NN denotes LOD
T7573 1088-1090 IN denotes to
T7572 1084-1087 CD denotes 5.4
T7571 1082-1083 -RRB- denotes )
T7570 1079-1082 NN denotes LOD
T7569 1078-1079 -LRB- denotes (
T7568 1073-1077 NNS denotes odds
T7567 1070-1072 IN denotes of
T7566 1060-1069 NN denotes logarithm
T7565 1055-1059 IN denotes from
T7564 1041-1044 NN denotes ANA
T7563 1037-1040 IN denotes for
T7562 1035-1036 CD denotes 3
T7561 1024-1034 NN denotes Chromosome
T7560 1021-1023 IN denotes on
T7559 1013-1014 CD denotes 6
T7558 1012-1013 HYPH denotes /
T7557 1007-1012 NN denotes C57BL
T7556 1015-1020 NN denotes locus
T7555 1003-1006 DT denotes the
T7554 1000-1002 IN denotes of
T7553 992-999 NN denotes linkage
T7552 988-991 DT denotes the
T7551 984-987 IN denotes for
T7550 964-975 JJ denotes statistical
T7549 976-983 NN denotes support
T7548 960-963 DT denotes the
T7547 1045-1054 VBD denotes increased
T7546 955-959 IN denotes that
T7545 939-947 NN denotes analysis
T7544 934-938 DT denotes this
T7543 931-933 IN denotes of
T7542 948-954 VBD denotes showed
T7541 923-930 NNS denotes results
T7540 919-922 DT denotes The
T7539 918-1099 sentence denotes The results of this analysis showed that the statistical support for the linkage of the C57BL/6 locus on Chromosome 3 for ANA increased from logarithm of odds (LOD) 5.4 to LOD 6.4.
T7538 917-918 . denotes .
T7537 916-917 -RRB- denotes )
T7536 912-916 CD denotes 1994
T7535 907-911 NNP denotes Zeng
T7534 906-907 -LRB- denotes (
T7533 885-895 RB denotes previously
T7532 896-905 VBN denotes described
T7531 882-884 IN denotes as
T7530 880-882 , denotes ,
T7529 879-880 CD denotes 1
T7528 868-878 NN denotes Chromosome
T7527 861-867 JJ denotes distal
T7526 858-860 IN denotes on
T7525 847-850 CD denotes 129
T7524 840-846 JJ denotes strong
T7523 835-839 RB denotes very
T7522 851-857 NN denotes effect
T7521 831-834 DT denotes the
T7520 827-830 IN denotes for
T7519 815-826 VBG denotes controlling
T7518 808-814 IN denotes whilst
T7517 806-808 , denotes ,
T7516 799-801 NN denotes F2
T7515 798-799 -RRB- denotes )
T7514 797-798 CD denotes 6
T7513 796-797 HYPH denotes /
T7512 791-796 NN denotes C57BL
T7511 789-790 SYM denotes ×
T7510 785-788 CD denotes 129
T7509 802-806 NNS denotes mice
T7508 784-785 -LRB- denotes (
T7507 781-783 IN denotes in
T7506 764-771 NN denotes linkage
T7505 772-780 NN denotes analysis
T7504 760-763 DT denotes the
T7503 750-759 VBG denotes repeating
T7502 747-749 IN denotes by
T7501 734-735 CD denotes 6
T7500 733-734 HYPH denotes /
T7499 728-733 NN denotes C57BL
T7498 736-746 NN denotes background
T7497 724-727 DT denotes the
T7496 719-723 IN denotes from
T7495 713-718 NNS denotes genes
T7494 710-712 IN denotes of
T7493 702-709 NNS denotes effects
T7492 698-701 DT denotes the
T7491 690-697 RB denotes further
T7490 677-689 VBD denotes investigated
T7489 674-676 PRP denotes We
T7488 673-918 sentence denotes We investigated further the effects of genes from the C57BL/6 background by repeating the linkage analysis in (129 × C57BL/6)F2 mice, whilst controlling for the very strong 129 effect on distal Chromosome 1, as previously described (Zeng 1994).
T7487 672-673 . denotes .
T7486 660-672 NN denotes autoimmunity
T7485 657-659 IN denotes of
T7484 646-656 NN denotes expression
T7483 642-645 DT denotes the
T7482 638-641 IN denotes for
T7481 630-637 NNS denotes alleles
T7480 621-622 HYPH denotes -
T7479 620-621 CD denotes 6
T7478 619-620 HYPH denotes /
T7477 614-619 NN denotes C57BL
T7476 610-613 CC denotes and
T7475 608-609 HYPH denotes -
T7474 622-629 VBN denotes derived
T7473 605-608 CD denotes 129
T7472 597-604 IN denotes between
T7471 584-596 NNS denotes interactions
T7470 574-583 JJ denotes essential
T7469 564-569 EX denotes there
T7468 570-573 VBP denotes are
T7467 559-563 IN denotes that
T7466 536-544 JJ denotes parental
T7465 529-535 JJ denotes inbred
T7464 545-552 NNS denotes strains
T7463 525-528 DT denotes the
T7462 522-524 IN denotes of
T7461 515-521 DT denotes either
T7460 512-514 IN denotes in
T7459 504-511 NN denotes absence
T7458 500-503 PRP$ denotes its
T7457 496-499 CC denotes and
T7456 477-484 JJ denotes genetic
T7455 470-476 JJ denotes hybrid
T7454 468-469 -RRB- denotes )
T7453 467-468 CD denotes 6
T7452 466-467 HYPH denotes /
T7451 461-466 NN denotes C57BL
T7450 459-460 SYM denotes ×
T7449 455-458 CD denotes 129
T7448 454-455 -LRB- denotes (
T7447 485-495 NN denotes background
T7446 450-453 DT denotes the
T7445 447-449 IN denotes in
T7444 437-446 NN denotes phenotype
T7443 426-436 JJ denotes autoimmune
T7442 423-425 IN denotes of
T7441 553-558 VBP denotes imply
T7440 408-412 JJ denotes high
T7439 413-422 NN denotes frequency
T7438 404-407 DT denotes The
T7437 403-673 sentence denotes The high frequency of autoimmune phenotype in the (129 × C57BL/6) hybrid genetic background and its absence in either of the inbred parental strains imply that there are essential interactions between 129- and C57BL/6-derived alleles for the expression of autoimmunity.
T7436 402-403 . denotes .
T7435 401-402 -RRB- denotes )
T7434 400-401 CD denotes 7
T7433 393-399 NN denotes Figure
T7432 391-392 : denotes ;
T7431 390-391 CD denotes 3
T7430 384-389 NN denotes Table
T7429 380-383 VB denotes see
T7428 379-380 -LRB- denotes (
T7427 353-367 JJ denotes anti-chromatin
T7426 349-352 CC denotes and
T7425 368-378 NN denotes production
T7424 338-348 JJ denotes anti-ssDNA
T7423 335-337 IN denotes to
T7402 203-210 NN denotes D3Mit13
T7401 199-202 CC denotes and
T7400 191-198 NN denotes D3Mit40
T7399 183-190 IN denotes between
T7398 268-274 VBD denotes showed
T7397 168-175 JJ denotes genomic
T7396 176-182 NN denotes region
T7395 166-167 DT denotes A
T7394 165-403 sentence denotes A genomic region between D3Mit40 and D3Mit13, with an estimated peak at position approximately 51 cM, showed a significant linkage to ANA production and weaker linkages to anti-ssDNA and anti-chromatin production (see Table 3; Figure 7).
T7393 164-165 . denotes .
T7392 163-164 CD denotes 3
T7391 152-162 NN denotes Chromosome
T7390 149-151 IN denotes on
T7389 128-142 NN denotes susceptibility
T7388 122-127 JJ denotes major
T7387 143-148 NN denotes locus
T7386 118-121 CD denotes one
T7385 113-117 IN denotes with
T7384 95-105 JJ denotes autoimmune
T7383 106-112 NNS denotes traits
T7382 91-94 DT denotes the
T7381 88-90 IN denotes to
T7380 67-68 CD denotes 6
T7379 66-67 HYPH denotes /
T7378 61-66 NN denotes C57BL
T7377 69-75 NN denotes strain
T7376 57-60 DT denotes the
T7375 49-56 NNS denotes cohorts
T7374 44-48 DT denotes both
T7373 41-43 IN denotes in
T7372 39-41 , denotes ,
T7371 22-23 HYPH denotes -
T7370 23-30 VBN denotes derived
T7369 19-22 CD denotes 129
T7368 31-39 NNS denotes segments
T7367 15-18 DT denotes the
T7366 12-14 IN denotes to
T7365 3-11 NN denotes addition
T7364 76-87 VBD denotes contributed
T7363 0-2 IN denotes In
T7422 326-334 NNS denotes linkages
T7421 319-325 JJR denotes weaker
T7420 315-318 CC denotes and
T7419 304-314 NN denotes production
T7418 300-303 NN denotes ANA
T7417 297-299 IN denotes to
T7416 277-288 JJ denotes significant
T7415 289-296 NN denotes linkage
T7414 275-276 DT denotes a
T7413 266-268 , denotes ,
T7412 261-263 CD denotes 51
T7411 247-260 RB denotes approximately
T7410 264-266 NNS denotes cM
T7409 238-246 NN denotes position
T7408 235-237 IN denotes at
T7407 220-229 VBN denotes estimated
T7406 230-234 NN denotes peak
T7405 217-219 DT denotes an
T7404 212-216 IN denotes with
T7403 210-212 , denotes ,
R2148 T7363 T7364 prep In,contributed
R2150 T7365 T7363 pobj addition,In
R2151 T7366 T7365 prep to,addition
R2153 T7367 T7368 det the,segments
R2154 T7368 T7366 pobj segments,to
R2155 T7369 T7370 advmod 129,derived
R2157 T7370 T7368 amod derived,segments
R2158 T7371 T7370 punct -,derived
R2159 T7372 T7364 punct ", ",contributed
R2161 T7373 T7364 prep in,contributed
R2162 T7374 T7375 det both,cohorts
R2164 T7375 T7373 pobj cohorts,in
R2165 T7376 T7377 det the,strain
R2166 T7377 T7364 nsubj strain,contributed
R2168 T7378 T7377 nmod C57BL,strain
R2169 T7379 T7378 punct /,C57BL
R2170 T7380 T7378 nummod 6,C57BL
R2172 T7381 T7364 prep to,contributed
R2173 T7382 T7383 det the,traits
R2174 T7383 T7381 pobj traits,to
R2176 T7384 T7383 amod autoimmune,traits
R2177 T7385 T7364 prep with,contributed
R2178 T7386 T7387 nummod one,locus
R2180 T7387 T7385 pobj locus,with
R2181 T7388 T7387 amod major,locus
R2182 T7389 T7387 compound susceptibility,locus
R2184 T7390 T7387 prep on,locus
R2185 T7391 T7390 pobj Chromosome,on
R2186 T7392 T7391 nummod 3,Chromosome
R2188 T7393 T7364 punct .,contributed
R2189 T7395 T7396 det A,region
R2190 T7396 T7398 nsubj region,showed
R2192 T7397 T7396 amod genomic,region
R2195 T7400 T7399 pobj D3Mit40,between
R2196 T7401 T7400 cc and,D3Mit40
R2197 T7402 T7400 conj D3Mit13,D3Mit40
R2199 T7403 T7396 punct ", ",region
R2200 T7404 T7396 prep with,region
R2202 T7405 T7406 det an,peak
R2203 T7406 T7404 pobj peak,with
R2205 T7407 T7406 amod estimated,peak
R2206 T7408 T7406 prep at,peak
R2208 T7409 T7410 nmod position,cM
R2209 T7410 T7408 pobj cM,at
R2210 T7411 T7412 advmod approximately,51
R2212 T7412 T7410 nummod 51,cM
R2213 T7413 T7398 punct ", ",showed
R2214 T7414 T7415 det a,linkage
R2216 T7415 T7398 dobj linkage,showed
R2217 T7416 T7415 amod significant,linkage
R2218 T7417 T7415 prep to,linkage
R2219 T7421 T7422 amod weaker,linkages
R2220 T7418 T7419 compound ANA,production
R2221 T7419 T7417 pobj production,to
R2222 T7420 T7415 cc and,linkage
R2223 T7422 T7415 conj linkages,linkage
R2224 T7423 T7422 prep to,linkages
R2225 T7424 T7425 amod anti-ssDNA,production
R2226 T7425 T7423 pobj production,to
R2227 T7526 T7522 prep on,effect
R2228 T7527 T7528 amod distal,Chromosome
R2229 T7426 T7424 cc and,anti-ssDNA
R2230 T7528 T7526 pobj Chromosome,on
R2231 T7529 T7528 nummod 1,Chromosome
R2232 T7427 T7424 conj anti-chromatin,anti-ssDNA
R2233 T7530 T7519 punct ", ",controlling
R2234 T7531 T7532 mark as,described
R2235 T7532 T7519 advcl described,controlling
R2236 T7428 T7429 punct (,see
R2237 T7533 T7532 advmod previously,described
R2238 T7534 T7535 punct (,Zeng
R2239 T7429 T7422 parataxis see,linkages
R2240 T7535 T7532 meta Zeng,described
R2241 T7536 T7535 nummod 1994,Zeng
R2242 T7537 T7535 punct ),Zeng
R2243 T7538 T7490 punct .,investigated
R2244 T7540 T7541 det The,results
R2245 T7541 T7542 nsubj results,showed
R2246 T7430 T7429 dobj Table,see
R2247 T7543 T7541 prep of,results
R2248 T7544 T7545 det this,analysis
R2249 T7431 T7430 nummod 3,Table
R2250 T7545 T7543 pobj analysis,of
R2251 T7546 T7547 mark that,increased
R2252 T7432 T7430 punct ;,Table
R2253 T7547 T7542 ccomp increased,showed
R2254 T7433 T7430 npadvmod Figure,Table
R2255 T7548 T7549 det the,support
R2256 T7549 T7547 nsubj support,increased
R2257 T7434 T7433 nummod 7,Figure
R2258 T7550 T7549 amod statistical,support
R2259 T7551 T7549 prep for,support
R2260 T7552 T7553 det the,linkage
R2261 T7435 T7429 punct ),see
R2262 T7553 T7551 pobj linkage,for
R2263 T7554 T7553 prep of,linkage
R2264 T7436 T7398 punct .,showed
R2265 T7555 T7556 det the,locus
R2266 T7556 T7554 pobj locus,of
R2267 T7557 T7556 nmod C57BL,locus
R2268 T7438 T7439 det The,frequency
R2269 T7558 T7557 punct /,C57BL
R2270 T7559 T7557 nummod 6,C57BL
R2271 T7560 T7553 prep on,linkage
R2272 T7561 T7560 pobj Chromosome,on
R2273 T7439 T7441 nsubj frequency,imply
R2274 T7562 T7561 nummod 3,Chromosome
R2275 T7563 T7553 prep for,linkage
R2276 T7564 T7563 pobj ANA,for
R2277 T7440 T7439 amod high,frequency
R2278 T7565 T7547 prep from,increased
R2279 T7566 T7565 pobj logarithm,from
R2280 T7567 T7566 prep of,logarithm
R2281 T7442 T7439 prep of,frequency
R2282 T7568 T7567 pobj odds,of
R2283 T7569 T7566 punct (,logarithm
R2284 T7570 T7566 appos LOD,logarithm
R2285 T7443 T7444 amod autoimmune,phenotype
R2286 T7571 T7566 punct ),logarithm
R2287 T7572 T7566 nummod 5.4,logarithm
R2288 T7444 T7442 pobj phenotype,of
R2289 T7573 T7565 prep to,from
R2290 T7574 T7573 pobj LOD,to
R2291 T7575 T7574 nummod 6.4,LOD
R2292 T7445 T7439 prep in,frequency
R2293 T7576 T7542 punct .,showed
R2297 T7446 T7447 det the,background
R2301 T7447 T7445 pobj background,in
R2305 T7448 T7447 punct (,background
R2309 T7449 T7447 nummod 129,background
R2313 T7450 T7449 punct ×,129
R2316 T7451 T7449 appos C57BL,129
R2319 T7452 T7451 punct /,C57BL
R2323 T7453 T7451 nummod 6,C57BL
R2326 T7454 T7449 punct ),129
R2329 T7455 T7449 amod hybrid,129
R2330 T7456 T7447 amod genetic,background
R2331 T7457 T7439 cc and,frequency
R2333 T7458 T7459 poss its,absence
R2336 T7459 T7439 conj absence,frequency
R2339 T7460 T7459 prep in,absence
R2343 T7461 T7460 pobj either,in
R2350 T7462 T7461 prep of,either
R2354 T7463 T7464 det the,strains
R2358 T7464 T7462 pobj strains,of
R2362 T7465 T7464 amod inbred,strains
R2365 T7466 T7464 amod parental,strains
R2368 T7467 T7468 mark that,are
R2369 T7468 T7441 ccomp are,imply
R2370 T7469 T7468 expl there,are
R2373 T7470 T7471 amod essential,interactions
R2375 T7471 T7468 attr interactions,are
R2379 T7472 T7471 prep between,interactions
R2383 T7473 T7474 npadvmod 129,derived
R2386 T7474 T7481 amod derived,alleles
R2390 T7475 T7473 punct -,129
R2392 T7476 T7473 cc and,129
R2394 T7477 T7473 conj C57BL,129
R2400 T7478 T7477 punct /,C57BL
R2404 T7479 T7477 nummod 6,C57BL
R2406 T7480 T7477 punct -,C57BL
R2410 T7481 T7472 pobj alleles,between
R2413 T7482 T7468 prep for,are
R2417 T7483 T7484 det the,expression
R2420 T7484 T7482 pobj expression,for
R2424 T7485 T7484 prep of,expression
R2428 T7486 T7485 pobj autoimmunity,of
R2430 T7487 T7441 punct .,imply
R2435 T7489 T7490 nsubj We,investigated
R2440 T7491 T7490 advmod further,investigated
R2445 T7492 T7493 det the,effects
R2451 T7493 T7490 dobj effects,investigated
R2454 T7494 T7493 prep of,effects
R2457 T7495 T7494 pobj genes,of
R2461 T7496 T7495 prep from,genes
R2465 T7497 T7498 det the,background
R2468 T7498 T7496 pobj background,from
R2472 T7499 T7498 nmod C57BL,background
R2476 T7500 T7499 punct /,C57BL
R2480 T7501 T7499 nummod 6,C57BL
R2483 T7502 T7490 prep by,investigated
R2487 T7503 T7502 pcomp repeating,by
R2491 T7504 T7505 det the,analysis
R2493 T7505 T7503 dobj analysis,repeating
R2494 T7506 T7505 compound linkage,analysis
R2495 T7507 T7503 prep in,repeating
R2496 T7508 T7509 punct (,mice
R2497 T7509 T7507 pobj mice,in
R2498 T7510 T7509 nummod 129,mice
R2499 T7511 T7510 punct ×,129
R2500 T7512 T7510 appos C57BL,129
R2501 T7513 T7512 punct /,C57BL
R2502 T7514 T7512 nummod 6,C57BL
R2503 T7515 T7509 punct ),mice
R2504 T7516 T7509 compound F2,mice
R2505 T7517 T7503 punct ", ",repeating
R2506 T7518 T7519 mark whilst,controlling
R2507 T7519 T7503 advcl controlling,repeating
R2508 T7520 T7519 prep for,controlling
R2509 T7521 T7522 det the,effect
R2510 T7522 T7520 pobj effect,for
R2511 T7523 T7524 advmod very,strong
R2512 T7524 T7522 amod strong,effect
R2513 T7525 T7522 nummod 129,effect
R2193 T7399 T7396 prep between,region

2_test

Id Subject Object Predicate Lexical cue
15314659-8013918-84764700 912-916 8013918 denotes 1994
T36122 912-916 8013918 denotes 1994

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6717 1015-1034 GO_SO_EXT:chromosomal_part_or_position_or_region_or_site denotes locus on Chromosome
T6716 868-878 GO_SO_EXT:chromosome denotes Chromosome
T6715 802-806 NCBITaxon:10088 denotes mice
T6714 713-718 SO_EXT:0000704 denotes genes
T6713 630-637 SO_EXT:0001023 denotes alleles
T6712 477-484 SO_EXT:0000704 denotes genetic
T6711 430-436 UBERON:0002405 denotes immune
T6710 358-367 GO:0000785 denotes chromatin
T6709 343-348 CHEBI_SO_EXT:single_stranded_DNA denotes ssDNA
T6708 168-175 SO_EXT:0001026 denotes genomic
T6707 143-162 GO_SO_EXT:chromosomal_part_or_position_or_region_or_site denotes locus on Chromosome
T6706 99-105 UBERON:0002405 denotes immune