> top > docs > PMC:441373 > spans > 34029-34717 > annotations

PMC:441373 / 34029-34717 JSONTXT

Annnotations TAB JSON ListView MergeView

craft-sa-dev

Id Subject Object Predicate Lexical cue
T8345 0-3 DT denotes The
T8346 16-20 NNS denotes data
T8347 4-15 NN denotes interaction
T8348 46-48 VBZ denotes is
T8349 21-24 IN denotes for
T8350 25-28 DT denotes the
T8351 40-45 NNS denotes TACCs
T8352 29-39 NN denotes vertebrate
T8353 107-116 VBG denotes beginning
T8354 49-59 RB denotes relatively
T8355 60-67 VBN denotes limited
T8356 67-68 : denotes ;
T8357 69-76 RB denotes however
T8358 76-78 , denotes ,
T8359 78-89 NN denotes interaction
T8360 90-98 NNS denotes networks
T8361 99-102 VBP denotes are
T8362 103-106 RB denotes now
T8363 117-119 TO denotes to
T8364 120-126 VB denotes emerge
T8365 126-127 . denotes .
T8366 127-313 sentence denotes The results of our functional analysis, as well as other published data clearly indicate that the vertebrate TACCs interact with proteins that can be divided into two broad categories:
T8367 128-131 DT denotes The
T8368 132-139 NNS denotes results
T8369 208-216 VBP denotes indicate
T8370 140-142 IN denotes of
T8371 143-146 PRP$ denotes our
T8372 158-166 NN denotes analysis
T8373 147-157 JJ denotes functional
T8374 166-168 , denotes ,
T8375 168-170 RB denotes as
T8376 176-178 IN denotes as
T8377 171-175 RB denotes well
T8378 179-184 JJ denotes other
T8379 195-199 NNS denotes data
T8380 185-194 VBN denotes published
T8381 200-207 RB denotes clearly
T8382 217-221 IN denotes that
T8383 243-251 VBP denotes interact
T8384 222-225 DT denotes the
T8385 237-242 NNS denotes TACCs
T8386 226-236 NN denotes vertebrate
T8387 252-256 IN denotes with
T8388 257-265 NN denotes proteins
T8389 266-270 WDT denotes that
T8390 278-285 VBN denotes divided
T8391 271-274 MD denotes can
T8392 275-277 VB denotes be
T8393 286-290 IN denotes into
T8394 291-294 CD denotes two
T8395 301-311 NNS denotes categories
T8396 295-300 JJ denotes broad
T8397 311-313 : denotes :
T8398 313-314 LS denotes 1
T8399 316-324 NN denotes proteins
T8400 313-533 sentence denotes 1) proteins with roles in centrosome/mitotic spindle dynamics, and 2) proteins involved in gene regulation, either at the level of transcription, or subsequent RNA processing and translation [3,5-7,15,19-21,24,25,33,34].
T8401 314-315 -RRB- denotes )
T8402 325-329 IN denotes with
T8403 330-335 NNS denotes roles
T8404 336-338 IN denotes in
T8405 339-349 NN denotes centrosome
T8406 350-357 JJ denotes mitotic
T8407 349-350 HYPH denotes /
T8408 358-365 NN denotes spindle
T8409 366-374 NNS denotes dynamics
T8410 374-376 , denotes ,
T8411 376-379 CC denotes and
T8412 380-381 LS denotes 2
T8413 383-391 NN denotes proteins
T8414 381-382 -RRB- denotes )
T8415 392-400 VBN denotes involved
T8416 401-403 IN denotes in
T8417 404-408 NN denotes gene
T8418 409-419 NN denotes regulation
T8419 419-421 , denotes ,
T8420 421-427 CC denotes either
T8421 428-430 IN denotes at
T8422 431-434 DT denotes the
T8423 435-440 NN denotes level
T8424 441-443 IN denotes of
T8425 444-457 NN denotes transcription
T8426 457-459 , denotes ,
T8427 459-461 CC denotes or
T8428 462-472 JJ denotes subsequent
T8429 477-487 NN denotes processing
T8430 473-476 NN denotes RNA
T8431 488-491 CC denotes and
T8432 492-503 NN denotes translation
T8433 504-505 -LRB- denotes [
T8434 505-506 CD denotes 3
T8435 506-507 , denotes ,
T8436 507-508 CD denotes 5
T8437 508-509 SYM denotes -
T8438 509-510 CD denotes 7
T8439 510-511 , denotes ,
T8440 511-513 CD denotes 15
T8441 513-514 , denotes ,
T8442 514-516 CD denotes 19
T8443 516-517 SYM denotes -
T8444 517-519 CD denotes 21
T8445 519-520 , denotes ,
T8446 520-522 CD denotes 24
T8447 522-523 , denotes ,
T8448 523-525 CD denotes 25
T8449 525-526 , denotes ,
T8450 526-528 CD denotes 33
T8451 528-529 , denotes ,
T8452 529-531 CD denotes 34
T8453 531-532 -RRB- denotes ]
T8454 532-533 . denotes .
T8455 533-688 sentence denotes Many of these proteins do not appear to interact directly with the protostome TACCs, but would be expected to be in the same protein complex (Fig. 6C,6D).
T8456 534-538 JJ denotes Many
T8457 564-570 VB denotes appear
T8458 539-541 IN denotes of
T8459 542-547 DT denotes these
T8460 548-556 NN denotes proteins
T8461 557-559 VBP denotes do
T8462 560-563 RB denotes not
T8463 571-573 TO denotes to
T8464 574-582 VB denotes interact
T8465 583-591 RB denotes directly
T8466 592-596 IN denotes with
T8467 597-600 DT denotes the
T8468 612-617 NNS denotes TACCs
T8469 601-611 NN denotes protostome
T8470 617-619 , denotes ,
T8471 619-622 CC denotes but
T8472 623-628 MD denotes would
T8473 632-640 VBN denotes expected
T8474 629-631 VB denotes be
T8475 641-643 TO denotes to
T8476 644-646 VB denotes be
T8477 647-649 IN denotes in
T8478 650-653 DT denotes the
T8479 667-674 NN denotes complex
T8480 654-658 JJ denotes same
T8481 659-666 NN denotes protein
T8482 675-676 -LRB- denotes (
T8483 684-686 CD denotes 6D
T8484 676-680 NN denotes Fig.
T8485 681-683 CD denotes 6C
T8486 683-684 , denotes ,
T8487 686-687 -RRB- denotes )
T8488 687-688 . denotes .
R5188 T8345 T8346 det The,data
R5189 T8346 T8348 nsubj data,is
R5190 T8347 T8346 compound interaction,data
R5191 T8348 T8353 ccomp is,beginning
R5192 T8349 T8346 prep for,data
R5193 T8350 T8351 det the,TACCs
R5194 T8351 T8349 pobj TACCs,for
R5195 T8352 T8351 compound vertebrate,TACCs
R5196 T8354 T8355 advmod relatively,limited
R5197 T8355 T8348 acomp limited,is
R5198 T8356 T8353 punct ;,beginning
R5199 T8357 T8353 advmod however,beginning
R5200 T8358 T8353 punct ", ",beginning
R5201 T8359 T8360 compound interaction,networks
R5202 T8360 T8353 nsubj networks,beginning
R5203 T8361 T8353 aux are,beginning
R5204 T8362 T8353 advmod now,beginning
R5205 T8363 T8364 aux to,emerge
R5206 T8364 T8353 xcomp emerge,beginning
R5207 T8365 T8353 punct .,beginning
R5208 T8367 T8368 det The,results
R5209 T8368 T8369 nsubj results,indicate
R5210 T8370 T8368 prep of,results
R5211 T8371 T8372 poss our,analysis
R5212 T8372 T8370 pobj analysis,of
R5213 T8373 T8372 amod functional,analysis
R5214 T8374 T8368 punct ", ",results
R5215 T8375 T8376 advmod as,as
R5216 T8376 T8368 cc as,results
R5217 T8377 T8376 advmod well,as
R5218 T8378 T8379 amod other,data
R5219 T8379 T8368 conj data,results
R5220 T8380 T8379 amod published,data
R5221 T8381 T8369 advmod clearly,indicate
R5222 T8382 T8383 mark that,interact
R5223 T8383 T8369 ccomp interact,indicate
R5224 T8384 T8385 det the,TACCs
R5225 T8385 T8383 nsubj TACCs,interact
R5226 T8386 T8385 compound vertebrate,TACCs
R5227 T8387 T8383 prep with,interact
R5228 T8388 T8387 pobj proteins,with
R5229 T8389 T8390 dep that,divided
R5230 T8390 T8388 relcl divided,proteins
R5231 T8391 T8390 aux can,divided
R5232 T8392 T8390 auxpass be,divided
R5233 T8393 T8390 prep into,divided
R5234 T8394 T8395 nummod two,categories
R5235 T8395 T8393 pobj categories,into
R5236 T8396 T8395 amod broad,categories
R5237 T8397 T8369 punct : ,indicate
R5238 T8398 T8399 meta 1,proteins
R5239 T8401 T8398 punct ),1
R5240 T8402 T8399 prep with,proteins
R5241 T8403 T8402 pobj roles,with
R5242 T8404 T8403 prep in,roles
R5243 T8405 T8406 npadvmod centrosome,mitotic
R5244 T8406 T8408 amod mitotic,spindle
R5245 T8407 T8406 punct /,mitotic
R5246 T8408 T8409 compound spindle,dynamics
R5247 T8409 T8404 pobj dynamics,in
R5248 T8410 T8399 punct ", ",proteins
R5249 T8411 T8399 cc and,proteins
R5250 T8412 T8413 meta 2,proteins
R5251 T8413 T8399 conj proteins,proteins
R5252 T8414 T8412 punct ),2
R5253 T8415 T8413 acl involved,proteins
R5254 T8416 T8415 prep in,involved
R5255 T8417 T8418 compound gene,regulation
R5256 T8418 T8416 pobj regulation,in
R5257 T8419 T8415 punct ", ",involved
R5258 T8420 T8421 preconj either,at
R5259 T8421 T8415 prep at,involved
R5260 T8422 T8423 det the,level
R5261 T8423 T8421 pobj level,at
R5262 T8424 T8423 prep of,level
R5263 T8425 T8424 pobj transcription,of
R5264 T8426 T8425 punct ", ",transcription
R5265 T8427 T8425 cc or,transcription
R5266 T8428 T8429 amod subsequent,processing
R5267 T8429 T8425 conj processing,transcription
R5268 T8430 T8429 compound RNA,processing
R5269 T8431 T8429 cc and,processing
R5270 T8432 T8429 conj translation,processing
R5271 T8433 T8434 punct [,3
R5272 T8434 T8415 parataxis 3,involved
R5273 T8435 T8434 punct ",",3
R5274 T8436 T8434 appos 5,3
R5275 T8437 T8438 punct -,7
R5276 T8438 T8436 prep 7,5
R5277 T8439 T8434 punct ",",3
R5278 T8440 T8434 appos 15,3
R5279 T8441 T8434 punct ",",3
R5280 T8442 T8434 appos 19,3
R5281 T8443 T8444 punct -,21
R5282 T8444 T8442 prep 21,19
R5283 T8445 T8434 punct ",",3
R5284 T8446 T8434 appos 24,3
R5285 T8447 T8434 punct ",",3
R5286 T8448 T8434 appos 25,3
R5287 T8449 T8434 punct ",",3
R5288 T8450 T8434 appos 33,3
R5289 T8451 T8434 punct ",",3
R5290 T8452 T8434 appos 34,3
R5291 T8453 T8434 punct ],3
R5292 T8454 T8413 punct .,proteins
R5293 T8456 T8457 nsubj Many,appear
R5294 T8458 T8456 prep of,Many
R5295 T8459 T8460 det these,proteins
R5296 T8460 T8458 pobj proteins,of
R5297 T8461 T8457 aux do,appear
R5298 T8462 T8457 neg not,appear
R5299 T8463 T8464 aux to,interact
R5300 T8464 T8457 xcomp interact,appear
R5301 T8465 T8464 advmod directly,interact
R5302 T8466 T8464 prep with,interact
R5303 T8467 T8468 det the,TACCs
R5304 T8468 T8466 pobj TACCs,with
R5305 T8469 T8468 compound protostome,TACCs
R5306 T8470 T8457 punct ", ",appear
R5307 T8471 T8457 cc but,appear
R5308 T8472 T8473 aux would,expected
R5309 T8473 T8457 conj expected,appear
R5310 T8474 T8473 auxpass be,expected
R5311 T8475 T8476 aux to,be
R5312 T8476 T8473 xcomp be,expected
R5313 T8477 T8476 prep in,be
R5314 T8478 T8479 det the,complex
R5315 T8479 T8477 pobj complex,in
R5316 T8480 T8479 amod same,complex
R5317 T8481 T8479 compound protein,complex
R5318 T8482 T8483 punct (,6D
R5319 T8483 T8473 parataxis 6D,expected
R5320 T8484 T8483 nmod Fig.,6D
R5321 T8485 T8483 nummod 6C,6D
R5322 T8486 T8483 punct ",",6D
R5323 T8487 T8483 punct ),6D
R5324 T8488 T8457 punct .,appear

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T8190 29-39 NCBITaxon:7742 denotes vertebrate
T8191 226-236 NCBITaxon:7742 denotes vertebrate
T8192 257-265 CHEBI_PR_EXT:protein denotes proteins
T8193 316-324 CHEBI_PR_EXT:protein denotes proteins
T8194 339-349 GO:0005813 denotes centrosome
T8195 350-357 GO:0007067 denotes mitotic
T8196 350-365 GO:0072686 denotes mitotic spindle
T8197 383-391 CHEBI_PR_EXT:protein denotes proteins
T8198 404-408 SO_EXT:0000704 denotes gene
T8199 409-419 GO:0065007 denotes regulation
T8200 444-457 GO_EXT:transcription denotes transcription
T8201 473-476 CHEBI_SO_EXT:RNA denotes RNA
T8202 473-487 GO:0006396 denotes RNA processing
T8203 477-487 SO_EXT:sequence_alteration_process denotes processing
T8204 492-503 GO:0006412 denotes translation
T8205 548-556 CHEBI_PR_EXT:protein denotes proteins
T8206 659-666 CHEBI_PR_EXT:protein denotes protein
T8207 659-674 GO:0043234 denotes protein complex

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T8092 29-39 NCBITaxon:7742 denotes vertebrate
T8093 226-236 NCBITaxon:7742 denotes vertebrate
T8094 339-349 GO:0005813 denotes centrosome
T8095 350-357 GO:0007067 denotes mitotic
T8096 350-365 GO:0072686 denotes mitotic spindle
T8097 404-408 SO:0000704 denotes gene
T8098 409-419 GO:0065007 denotes regulation
T8099 473-487 GO:0006396 denotes RNA processing
T8100 492-503 GO:0006412 denotes translation
T8101 659-674 GO:0043234 denotes protein complex

2_test

Id Subject Object Predicate Lexical cue
15207008-12620397-9666042 505-506 12620397 denotes 3
15207008-12956952-9666043 507-508 12956952 denotes 5
15207008-12956951-9666043 507-508 12956951 denotes 5
15207008-11025203-9666043 507-508 11025203 denotes 5
15207008-11903063-9666044 511-513 11903063 denotes 15
15207008-12165861-9666045 514-516 12165861 denotes 19
15207008-14603251-9666045 514-516 14603251 denotes 19
15207008-14602875-9666045 514-516 14602875 denotes 19
15207008-11433296-9666046 520-522 11433296 denotes 24
15207008-11827981-9666047 523-525 11827981 denotes 25
15207008-11847113-9666048 526-528 11847113 denotes 33
15207008-14767476-9666049 529-531 14767476 denotes 34