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In addition, as shown in Fig. 5, we have identified additional TACC1 isoforms that result from alternative splicing of exons 1b-4a. The functions of these different isoforms are unknown, however the region deleted from the shorter variants can include the binding site for LSm7 [20] (variants C, D, F-I), and/or the nuclear localization signals and binding site for GAS41 [15] and PCTAIRE2BP [20] (isoforms B-D, S). One of these isoforms, TACC1S is localized exclusively to the cytoplasm [19], suggesting that the shorter isoforms would not be able to interact with elements of the chomatin remodeling and/or RNA processing machinery in the nucleus. Thus, changes in the complement of TACC1 isoforms in the cell may result in alterations in cellular RNA metabolism at multiple levels, and may account for the observation that TACC1D and TACC1F isoforms are associated with tumorigenic changes in gastric mucosa [18]."}

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{"project":"craft-ca-core-dev","denotations":[{"id":"T6271","span":{"begin":0,"end":20},"obj":"GO:0000380"},{"id":"T6272","span":{"begin":49,"end":57},"obj":"SO:0000167"},{"id":"T6273","span":{"begin":95,"end":100},"obj":"NCBITaxon:9606"},{"id":"T6274","span":{"begin":101,"end":106},"obj":"PR:000016006"},{"id":"T6275","span":{"begin":107,"end":111},"obj":"SO:0000704"},{"id":"T6276","span":{"begin":184,"end":189},"obj":"PR:000016006"},{"id":"T6277","span":{"begin":190,"end":198},"obj":"SO:0001060"},{"id":"T6278","span":{"begin":216,"end":236},"obj":"GO:0000380"},{"id":"T6279","span":{"begin":240,"end":245},"obj":"SO:0000147"},{"id":"T6280","span":{"begin":286,"end":294},"obj":"SO:0001060"},{"id":"T6281","span":{"begin":377,"end":389},"obj":"SO:0000409"},{"id":"T6282","span":{"begin":394,"end":398},"obj":"PR:000009965"},{"id":"T6283","span":{"begin":437,"end":444},"obj":"GO:0005634"},{"id":"T6284","span":{"begin":437,"end":465},"obj":"SO:0001528"},{"id":"T6285","span":{"begin":470,"end":482},"obj":"SO:0000409"},{"id":"T6286","span":{"begin":487,"end":492},"obj":"PR:000017527"},{"id":"T6287","span":{"begin":502,"end":512},"obj":"PR:000029784"},{"id":"T6288","span":{"begin":519,"end":527},"obj":"SO:0001060"},{"id":"T6289","span":{"begin":550,"end":558},"obj":"SO:0001060"},{"id":"T6290","span":{"begin":599,"end":608},"obj":"GO:0005737"},{"id":"T6291","span":{"begin":643,"end":651},"obj":"SO:0001060"},{"id":"T6292","span":{"begin":703,"end":711},"obj":"GO:0000785"},{"id":"T6293","span":{"begin":703,"end":722},"obj":"GO:0006338"},{"id":"T6294","span":{"begin":730,"end":744},"obj":"GO:0006396"},{"id":"T6295","span":{"begin":762,"end":769},"obj":"GO:0005634"},{"id":"T6296","span":{"begin":806,"end":811},"obj":"PR:000016006"},{"id":"T6297","span":{"begin":812,"end":820},"obj":"SO:0001060"},{"id":"T6298","span":{"begin":862,"end":870},"obj":"_FRAGMENT"},{"id":"T6299","span":{"begin":875,"end":885},"obj":"GO:0044237"},{"id":"T6300","span":{"begin":871,"end":885},"obj":"GO:0016070"},{"id":"T6301","span":{"begin":965,"end":973},"obj":"SO:0001060"},{"id":"T6302","span":{"begin":1017,"end":1031},"obj":"UBERON:0001199"}],"relations":[{"id":"R4061","pred":"_lexicallyChainedTo","subj":"T6299","obj":"T6298"}],"text":"Alternative splicing, together with differential promoter usage has already been noted for the human TACC1 gene [18,19]. In addition, as shown in Fig. 5, we have identified additional TACC1 isoforms that result from alternative splicing of exons 1b-4a. The functions of these different isoforms are unknown, however the region deleted from the shorter variants can include the binding site for LSm7 [20] (variants C, D, F-I), and/or the nuclear localization signals and binding site for GAS41 [15] and PCTAIRE2BP [20] (isoforms B-D, S). One of these isoforms, TACC1S is localized exclusively to the cytoplasm [19], suggesting that the shorter isoforms would not be able to interact with elements of the chomatin remodeling and/or RNA processing machinery in the nucleus. Thus, changes in the complement of TACC1 isoforms in the cell may result in alterations in cellular RNA metabolism at multiple levels, and may account for the observation that TACC1D and TACC1F isoforms are associated with tumorigenic changes in gastric mucosa [18]."}

{"project":"2_test","denotations":[{"id":"15207008-12547166-9666015","span":{"begin":113,"end":115},"obj":"12547166"},{"id":"15207008-12165861-9666016","span":{"begin":116,"end":118},"obj":"12165861"},{"id":"15207008-14603251-9666017","span":{"begin":400,"end":402},"obj":"14603251"},{"id":"15207008-11903063-9666018","span":{"begin":494,"end":496},"obj":"11903063"},{"id":"15207008-14603251-9666019","span":{"begin":514,"end":516},"obj":"14603251"},{"id":"15207008-12165861-9666020","span":{"begin":610,"end":612},"obj":"12165861"},{"id":"15207008-12547166-9666021","span":{"begin":1033,"end":1035},"obj":"12547166"}],"text":"Alternative splicing, together with differential promoter usage has already been noted for the human TACC1 gene [18,19]. In addition, as shown in Fig. 5, we have identified additional TACC1 isoforms that result from alternative splicing of exons 1b-4a. The functions of these different isoforms are unknown, however the region deleted from the shorter variants can include the binding site for LSm7 [20] (variants C, D, F-I), and/or the nuclear localization signals and binding site for GAS41 [15] and PCTAIRE2BP [20] (isoforms B-D, S). One of these isoforms, TACC1S is localized exclusively to the cytoplasm [19], suggesting that the shorter isoforms would not be able to interact with elements of the chomatin remodeling and/or RNA processing machinery in the nucleus. Thus, changes in the complement of TACC1 isoforms in the cell may result in alterations in cellular RNA metabolism at multiple levels, and may account for the observation that TACC1D and TACC1F isoforms are associated with tumorigenic changes in gastric mucosa [18]."}