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Id Subject Object Predicate Lexical cue
T703 11-14 DT denotes The
T704 15-24 NN denotes evolution
T705 55-65 VBN denotes associated
T706 25-27 IN denotes of
T707 28-35 JJ denotes complex
T708 36-45 NNS denotes organisms
T709 46-49 VBZ denotes has
T710 50-54 VBN denotes been
T711 66-70 IN denotes with
T712 71-74 DT denotes the
T713 75-85 NN denotes generation
T714 86-88 IN denotes of
T715 89-93 NN denotes gene
T716 94-102 NNS denotes families
T717 103-105 IN denotes by
T718 106-109 DT denotes the
T719 120-131 NN denotes duplication
T720 110-119 JJ denotes continual
T721 132-134 IN denotes of
T722 135-137 DT denotes an
T723 163-166 NN denotes set
T724 138-145 JJ denotes initial
T725 146-156 RB denotes relatively
T726 157-162 JJ denotes small
T727 167-169 IN denotes of
T728 170-179 JJ denotes ancestral
T729 180-185 NNS denotes genes
T730 185-186 . denotes .
T731 186-400 sentence denotes Through this process, followed by subsequent mutation, reduplication and exon shuffling between gene families, genes have evolved both discrete, and partially redundant functions with their related family members.
T732 187-194 IN denotes Through
T733 309-316 VBN denotes evolved
T734 195-199 DT denotes this
T735 200-207 NN denotes process
T736 207-209 , denotes ,
T737 209-217 VBN denotes followed
T738 218-220 IN denotes by
T739 221-231 JJ denotes subsequent
T740 232-240 NN denotes mutation
T741 240-242 , denotes ,
T742 242-255 NN denotes reduplication
T743 256-259 CC denotes and
T744 260-264 NN denotes exon
T745 265-274 NN denotes shuffling
T746 275-282 IN denotes between
T747 283-287 NN denotes gene
T748 288-296 NNS denotes families
T749 296-298 , denotes ,
T750 298-303 NNS denotes genes
T751 304-308 VBP denotes have
T752 317-321 CC denotes both
T753 322-330 JJ denotes discrete
T754 356-365 NNS denotes functions
T755 330-332 , denotes ,
T756 332-335 CC denotes and
T757 336-345 RB denotes partially
T758 346-355 JJ denotes redundant
T759 366-370 IN denotes with
T760 371-376 PRP$ denotes their
T761 392-399 NNS denotes members
T762 377-384 VBN denotes related
T763 385-391 NN denotes family
T764 399-400 . denotes .
T765 400-625 sentence denotes With the completion of the genome sequencing projects of human, mouse, rat, fruit fly and nematodes, we are now in a position to ask fundamental questions in regard to how genes interact in the context of the whole organism.
T766 401-405 IN denotes With
T767 505-508 VBP denotes are
T768 406-409 DT denotes the
T769 410-420 NN denotes completion
T770 421-423 IN denotes of
T771 424-427 DT denotes the
T772 446-454 NNS denotes projects
T773 428-434 NN denotes genome
T774 435-445 NN denotes sequencing
T775 455-457 IN denotes of
T776 458-463 JJ denotes human
T777 463-465 , denotes ,
T778 465-470 NN denotes mouse
T779 470-472 , denotes ,
T780 472-475 NN denotes rat
T781 475-477 , denotes ,
T782 477-482 NN denotes fruit
T783 483-486 NN denotes fly
T784 487-490 CC denotes and
T785 491-500 NNS denotes nematodes
T786 500-502 , denotes ,
T787 502-504 PRP denotes we
T788 509-512 RB denotes now
T789 513-515 IN denotes in
T790 516-517 DT denotes a
T791 518-526 NN denotes position
T792 527-529 TO denotes to
T793 530-533 VB denotes ask
T794 534-545 JJ denotes fundamental
T795 546-555 NNS denotes questions
T796 556-558 IN denotes in
T797 559-565 NN denotes regard
T798 566-568 IN denotes to
T799 569-572 WRB denotes how
T800 579-587 VBP denotes interact
T801 573-578 NNS denotes genes
T802 588-590 IN denotes in
T803 591-594 DT denotes the
T804 595-602 NN denotes context
T805 603-605 IN denotes of
T806 606-609 DT denotes the
T807 616-624 NN denotes organism
T808 610-615 JJ denotes whole
T809 624-625 . denotes .
T810 625-809 sentence denotes Thus, with the appropriate application of bioinformatics, it is now possible to trace the lineage of particular genes and gene families, with related gene families in other organisms.
T811 626-630 RB denotes Thus
T812 687-689 VBZ denotes is
T813 630-632 , denotes ,
T814 632-636 IN denotes with
T815 637-640 DT denotes the
T816 653-664 NN denotes application
T817 641-652 JJ denotes appropriate
T818 665-667 IN denotes of
T819 668-682 NN denotes bioinformatics
T820 682-684 , denotes ,
T821 684-686 PRP denotes it
T822 690-693 RB denotes now
T823 694-702 JJ denotes possible
T824 703-705 TO denotes to
T825 706-711 VB denotes trace
T826 712-715 DT denotes the
T827 716-723 NN denotes lineage
T828 724-726 IN denotes of
T829 727-737 JJ denotes particular
T830 738-743 NNS denotes genes
T831 744-747 CC denotes and
T832 748-752 NN denotes gene
T833 753-761 NNS denotes families
T834 761-763 , denotes ,
T835 763-767 IN denotes with
T836 768-775 JJ denotes related
T837 781-789 NNS denotes families
T838 776-780 NN denotes gene
T839 790-792 IN denotes in
T840 793-798 JJ denotes other
T841 799-808 NNS denotes organisms
T842 808-809 . denotes .
T843 809-1041 sentence denotes Furthermore, with the growing amount of large-scale proteomic and genomic data becoming publicly available, this analysis can now be extended to reveal the complex interplay between evolution of gene structure and protein function.
T844 810-821 RB denotes Furthermore
T845 943-951 VBN denotes extended
T846 821-823 , denotes ,
T847 823-827 IN denotes with
T848 828-831 DT denotes the
T849 840-846 NN denotes amount
T850 832-839 VBG denotes growing
T851 889-897 VBG denotes becoming
T852 847-849 IN denotes of
T853 850-855 JJ denotes large
T854 856-861 NN denotes scale
T855 855-856 HYPH denotes -
T856 884-888 NNS denotes data
T857 862-871 JJ denotes proteomic
T858 872-875 CC denotes and
T859 876-883 JJ denotes genomic
T860 898-906 RB denotes publicly
T861 907-916 JJ denotes available
T862 916-918 , denotes ,
T863 918-922 DT denotes this
T864 923-931 NN denotes analysis
T865 932-935 MD denotes can
T866 936-939 RB denotes now
T867 940-942 VB denotes be
T868 952-954 TO denotes to
T869 955-961 VB denotes reveal
T870 962-965 DT denotes the
T871 974-983 NN denotes interplay
T872 966-973 JJ denotes complex
T873 984-991 IN denotes between
T874 992-1001 NN denotes evolution
T875 1002-1004 IN denotes of
T876 1005-1009 NN denotes gene
T877 1010-1019 NN denotes structure
T878 1020-1023 CC denotes and
T879 1024-1031 NN denotes protein
T880 1032-1040 NN denotes function
T881 1040-1041 . denotes .
T882 1041-1208 sentence denotes The first Transforming acidic coiled coil gene, TACC1, was identified during the development of an expression map of the proximal short arm of human chromosome 8 [1].
T883 1042-1045 DT denotes The
T884 1084-1088 NN denotes gene
T885 1046-1051 JJ denotes first
T886 1052-1064 NN denotes Transforming
T887 1065-1071 JJ denotes acidic
T888 1072-1078 VBN denotes coiled
T889 1079-1083 NN denotes coil
T890 1101-1111 VBN denotes identified
T891 1088-1090 , denotes ,
T892 1090-1095 NN denotes TACC1
T893 1095-1097 , denotes ,
T894 1097-1100 VBD denotes was
T895 1112-1118 IN denotes during
T896 1119-1122 DT denotes the
T897 1123-1134 NN denotes development
T898 1135-1137 IN denotes of
T899 1138-1140 DT denotes an
T900 1152-1155 NN denotes map
T901 1141-1151 NN denotes expression
T902 1156-1158 IN denotes of
T903 1159-1162 DT denotes the
T904 1178-1181 NN denotes arm
T905 1163-1171 JJ denotes proximal
T906 1172-1177 JJ denotes short
T907 1182-1184 IN denotes of
T908 1185-1190 JJ denotes human
T909 1191-1201 NN denotes chromosome
T910 1202-1203 CD denotes 8
T911 1204-1205 -LRB- denotes [
T912 1205-1206 CD denotes 1
T913 1206-1207 -RRB- denotes ]
T914 1207-1208 . denotes .
T915 1208-1413 sentence denotes Two additional TACC family members were subsequently identified and mapped to paralogous chromosomal regions on human chromosomes 4p16 and 10q26, physically close to members of the FGFR gene family [1-3].
T916 1209-1212 CD denotes Two
T917 1236-1243 NNS denotes members
T918 1213-1223 JJ denotes additional
T919 1224-1228 NN denotes TACC
T920 1229-1235 NN denotes family
T921 1262-1272 VBN denotes identified
T922 1244-1248 VBD denotes were
T923 1249-1261 RB denotes subsequently
T924 1273-1276 CC denotes and
T925 1277-1283 VBN denotes mapped
T926 1284-1286 IN denotes to
T927 1287-1297 JJ denotes paralogous
T928 1310-1317 NNS denotes regions
T929 1298-1309 JJ denotes chromosomal
T930 1318-1320 IN denotes on
T931 1321-1326 JJ denotes human
T932 1339-1343 NN denotes 4p16
T933 1327-1338 NNS denotes chromosomes
T934 1344-1347 CC denotes and
T935 1348-1353 NN denotes 10q26
T936 1353-1355 , denotes ,
T937 1355-1365 RB denotes physically
T938 1366-1371 JJ denotes close
T939 1372-1374 IN denotes to
T940 1375-1382 NNS denotes members
T941 1383-1385 IN denotes of
T942 1386-1389 DT denotes the
T943 1400-1406 NN denotes family
T944 1390-1394 NN denotes FGFR
T945 1395-1399 NN denotes gene
T946 1407-1408 -LRB- denotes [
T947 1408-1409 CD denotes 1
T948 1409-1410 SYM denotes -
T949 1410-1411 CD denotes 3
T950 1411-1412 -RRB- denotes ]
T951 1412-1413 . denotes .
T952 1413-1667 sentence denotes This mapping data, together with identification of a single TACC gene in the protostomes Caenorhabitis elegans, and Drosophila melanogaster [4-6], led to the speculation that the ancestral FGFR and TACC genes were located physically close to each other.
T953 1414-1418 DT denotes This
T954 1427-1431 NNS denotes data
T955 1419-1426 NN denotes mapping
T956 1561-1564 VBD denotes led
T957 1431-1433 , denotes ,
T958 1433-1441 RB denotes together
T959 1442-1446 IN denotes with
T960 1447-1461 NN denotes identification
T961 1462-1464 IN denotes of
T962 1465-1466 DT denotes a
T963 1479-1483 NN denotes gene
T964 1467-1473 JJ denotes single
T965 1474-1478 NN denotes TACC
T966 1484-1486 IN denotes in
T967 1487-1490 DT denotes the
T968 1517-1524 NNP denotes elegans
T969 1491-1502 NNS denotes protostomes
T970 1503-1516 NNP denotes Caenorhabitis
T971 1524-1526 , denotes ,
T972 1526-1529 CC denotes and
T973 1530-1540 NNP denotes Drosophila
T974 1541-1553 NNP denotes melanogaster
T975 1554-1555 -LRB- denotes [
T976 1555-1556 CD denotes 4
T977 1556-1557 SYM denotes -
T978 1557-1558 CD denotes 6
T979 1558-1559 -RRB- denotes ]
T980 1559-1561 , denotes ,
T981 1565-1567 IN denotes to
T982 1568-1571 DT denotes the
T983 1572-1583 NN denotes speculation
T984 1584-1588 IN denotes that
T985 1628-1635 VBN denotes located
T986 1589-1592 DT denotes the
T987 1617-1622 NNS denotes genes
T988 1593-1602 JJ denotes ancestral
T989 1603-1607 NN denotes FGFR
T990 1608-1611 CC denotes and
T991 1612-1616 NN denotes TACC
T992 1623-1627 VBD denotes were
T993 1636-1646 RB denotes physically
T994 1647-1652 RB denotes close
T995 1653-1655 IN denotes to
T996 1656-1660 DT denotes each
T997 1661-1666 JJ denotes other
T998 1666-1667 . denotes .
T999 1667-1859 sentence denotes Thus, during the evolution of vertebrates, subsequent successive duplications of the ancestral gene cluster have given rise to three TACC family members located close to FGFR genes in humans.
T1000 1668-1672 RB denotes Thus
T1001 1781-1786 VBN denotes given
T1002 1672-1674 , denotes ,
T1003 1674-1680 IN denotes during
T1004 1681-1684 DT denotes the
T1005 1685-1694 NN denotes evolution
T1006 1695-1697 IN denotes of
T1007 1698-1709 NNS denotes vertebrates
T1008 1709-1711 , denotes ,
T1009 1711-1721 JJ denotes subsequent
T1010 1733-1745 NNS denotes duplications
T1011 1722-1732 JJ denotes successive
T1012 1746-1748 IN denotes of
T1013 1749-1752 DT denotes the
T1014 1768-1775 NN denotes cluster
T1015 1753-1762 JJ denotes ancestral
T1016 1763-1767 NN denotes gene
T1017 1776-1780 VBP denotes have
T1018 1787-1791 NN denotes rise
T1019 1792-1794 IN denotes to
T1020 1795-1800 CD denotes three
T1021 1813-1820 NNS denotes members
T1022 1801-1805 NN denotes TACC
T1023 1806-1812 NN denotes family
T1024 1821-1828 VBN denotes located
T1025 1829-1834 RB denotes close
T1026 1835-1837 IN denotes to
T1027 1838-1842 NN denotes FGFR
T1028 1843-1848 NNS denotes genes
T1029 1849-1851 IN denotes in
T1030 1852-1858 NNS denotes humans
T1031 1858-1859 . denotes .
T1032 1859-2102 sentence denotes In accordance with the proposed quadruplication of the vertebrate genome during evolution, there is a fourth FGFR family member in vertebrates, raising the question of whether a fourth TACC gene is associated with FGFR4 in vertebrate genomes.
T1033 1860-1862 IN denotes In
T1034 1957-1959 VBZ denotes is
T1035 1863-1873 NN denotes accordance
T1036 1874-1878 IN denotes with
T1037 1879-1882 DT denotes the
T1038 1892-1907 NN denotes quadruplication
T1039 1883-1891 VBN denotes proposed
T1040 1908-1910 IN denotes of
T1041 1911-1914 DT denotes the
T1042 1926-1932 NN denotes genome
T1043 1915-1925 NN denotes vertebrate
T1044 1933-1939 IN denotes during
T1045 1940-1949 NN denotes evolution
T1046 1949-1951 , denotes ,
T1047 1951-1956 EX denotes there
T1048 1960-1961 DT denotes a
T1049 1981-1987 NN denotes member
T1050 1962-1968 JJ denotes fourth
T1051 1969-1973 NN denotes FGFR
T1052 1974-1980 NN denotes family
T1053 1988-1990 IN denotes in
T1054 1991-2002 NNS denotes vertebrates
T1055 2002-2004 , denotes ,
T1056 2004-2011 VBG denotes raising
T1057 2012-2015 DT denotes the
T1058 2016-2024 NN denotes question
T1059 2025-2027 IN denotes of
T1060 2028-2035 IN denotes whether
T1061 2058-2068 VBN denotes associated
T1062 2036-2037 DT denotes a
T1063 2050-2054 NN denotes gene
T1064 2038-2044 JJ denotes fourth
T1065 2045-2049 NN denotes TACC
T1066 2055-2057 VBZ denotes is
T1067 2069-2073 IN denotes with
T1068 2074-2079 NN denotes FGFR4
T1069 2080-2082 IN denotes in
T1070 2083-2093 NN denotes vertebrate
T1071 2094-2101 NNS denotes genomes
T1072 2101-2102 . denotes .
T1073 2102-2263 sentence denotes To date, only three active TACC genes have been cloned in humans [1-3], one in each of mouse [7], Xenopus laevis [8], D. melanogaster [4], and C. elegans [5,6].
T1074 2103-2105 IN denotes To
T1075 2175-2178 CD denotes one
T1076 2106-2110 NN denotes date
T1077 2110-2112 , denotes ,
T1078 2112-2116 RB denotes only
T1079 2135-2140 NNS denotes genes
T1080 2117-2122 CD denotes three
T1081 2123-2129 JJ denotes active
T1082 2130-2134 NN denotes TACC
T1083 2151-2157 VBN denotes cloned
T1084 2141-2145 VBP denotes have
T1085 2146-2150 VBN denotes been
T1086 2158-2160 IN denotes in
T1087 2161-2167 NNS denotes humans
T1088 2168-2169 -LRB- denotes [
T1089 2169-2170 CD denotes 1
T1090 2170-2171 SYM denotes -
T1091 2171-2172 CD denotes 3
T1092 2172-2173 -RRB- denotes ]
T1093 2173-2175 , denotes ,
T1094 2179-2181 IN denotes in
T1095 2182-2186 DT denotes each
T1096 2187-2189 IN denotes of
T1097 2190-2195 NN denotes mouse
T1098 2196-2197 -LRB- denotes [
T1099 2197-2198 CD denotes 7
T1100 2198-2199 -RRB- denotes ]
T1101 2199-2201 , denotes ,
T1102 2201-2208 NNP denotes Xenopus
T1103 2209-2215 NNP denotes laevis
T1104 2216-2217 -LRB- denotes [
T1105 2217-2218 CD denotes 8
T1106 2218-2219 -RRB- denotes ]
T1107 2219-2221 , denotes ,
T1108 2221-2223 NNP denotes D.
T1109 2224-2236 NNP denotes melanogaster
T1110 2237-2238 -LRB- denotes [
T1111 2238-2239 CD denotes 4
T1112 2239-2240 -RRB- denotes ]
T1113 2240-2242 , denotes ,
T1114 2242-2245 CC denotes and
T1115 2246-2248 NNP denotes C.
T1116 2249-2256 NNP denotes elegans
T1117 2257-2258 -LRB- denotes [
T1118 2260-2261 CD denotes 6
T1119 2258-2259 CD denotes 5
T1120 2259-2260 , denotes ,
T1121 2261-2262 -RRB- denotes ]
T1122 2262-2263 . denotes .
T1123 2263-2482 sentence denotes Although two additional new candidate TACC family members, Oryctolagus cuniculus TACC4 [9] and human RHAMM [10] have been proposed, their true identity and placement in the evolution of the TACC family is under debate.
T1124 2264-2272 IN denotes Although
T1125 2386-2394 VBN denotes proposed
T1126 2273-2276 CD denotes two
T1127 2314-2321 NNS denotes members
T1128 2277-2287 JJ denotes additional
T1129 2288-2291 JJ denotes new
T1130 2292-2301 NN denotes candidate
T1131 2302-2306 NN denotes TACC
T1132 2307-2313 NN denotes family
T1133 2321-2323 , denotes ,
T1134 2323-2334 NNP denotes Oryctolagus
T1135 2345-2350 NN denotes TACC4
T1136 2335-2344 NNP denotes cuniculus
T1137 2351-2352 -LRB- denotes [
T1138 2352-2353 CD denotes 9
T1139 2353-2354 -RRB- denotes ]
T1140 2355-2358 CC denotes and
T1141 2359-2364 JJ denotes human
T1142 2365-2370 NN denotes RHAMM
T1143 2371-2372 -LRB- denotes [
T1144 2372-2374 CD denotes 10
T1145 2374-2375 -RRB- denotes ]
T1146 2376-2380 VBP denotes have
T1147 2381-2385 VBN denotes been
T1148 2466-2468 VBZ denotes is
T1149 2394-2396 , denotes ,
T1150 2396-2401 PRP$ denotes their
T1151 2407-2415 NN denotes identity
T1152 2402-2406 JJ denotes true
T1153 2416-2419 CC denotes and
T1154 2420-2429 NN denotes placement
T1155 2430-2432 IN denotes in
T1156 2433-2436 DT denotes the
T1157 2437-2446 NN denotes evolution
T1158 2447-2449 IN denotes of
T1159 2450-2453 DT denotes the
T1160 2459-2465 NN denotes family
T1161 2454-2458 NN denotes TACC
T1162 2469-2474 IN denotes under
T1163 2475-2481 NN denotes debate
T1164 2481-2482 . denotes .
T1165 2482-2834 sentence denotes Thus, the identification and functional characterization of new members of the TACC family in other organisms, alternatively spliced isoforms of each TACC and comparison of the phylogenetic relationship of these genes relative to other members of the coiled coil superfamily will resolve this issue and provide clues to the evolution of TACC function.
T1166 2483-2487 RB denotes Thus
T1167 2763-2770 VB denotes resolve
T1168 2487-2489 , denotes ,
T1169 2489-2492 DT denotes the
T1170 2493-2507 NN denotes identification
T1171 2508-2511 CC denotes and
T1172 2512-2522 JJ denotes functional
T1173 2523-2539 NN denotes characterization
T1174 2540-2542 IN denotes of
T1175 2543-2546 JJ denotes new
T1176 2547-2554 NNS denotes members
T1177 2555-2557 IN denotes of
T1178 2558-2561 DT denotes the
T1179 2567-2573 NN denotes family
T1180 2562-2566 NN denotes TACC
T1181 2574-2576 IN denotes in
T1182 2577-2582 JJ denotes other
T1183 2583-2592 NNS denotes organisms
T1184 2592-2594 , denotes ,
T1185 2594-2607 RB denotes alternatively
T1186 2608-2615 VBN denotes spliced
T1187 2616-2624 NNS denotes isoforms
T1188 2625-2627 IN denotes of
T1189 2628-2632 DT denotes each
T1190 2633-2637 NN denotes TACC
T1191 2638-2641 CC denotes and
T1192 2642-2652 NN denotes comparison
T1193 2653-2655 IN denotes of
T1194 2656-2659 DT denotes the
T1195 2673-2685 NN denotes relationship
T1196 2660-2672 JJ denotes phylogenetic
T1197 2686-2688 IN denotes of
T1198 2689-2694 DT denotes these
T1199 2695-2700 NNS denotes genes
T1200 2701-2709 JJ denotes relative
T1201 2710-2712 IN denotes to
T1202 2713-2718 JJ denotes other
T1203 2719-2726 NNS denotes members
T1204 2727-2729 IN denotes of
T1205 2730-2733 DT denotes the
T1206 2746-2757 NN denotes superfamily
T1207 2734-2740 VBN denotes coiled
T1208 2741-2745 NN denotes coil
T1209 2758-2762 MD denotes will
T1210 2771-2775 DT denotes this
T1211 2776-2781 NN denotes issue
T1212 2782-2785 CC denotes and
T1213 2786-2793 VB denotes provide
T1214 2794-2799 NNS denotes clues
T1215 2800-2802 IN denotes to
T1216 2803-2806 DT denotes the
T1217 2807-2816 NN denotes evolution
T1218 2817-2819 IN denotes of
T1219 2820-2824 NN denotes TACC
T1220 2825-2833 NN denotes function
T1221 2833-2834 . denotes .
R316 T703 T704 det The,evolution
R317 T704 T705 nsubjpass evolution,associated
R318 T706 T704 prep of,evolution
R319 T707 T708 amod complex,organisms
R320 T708 T706 pobj organisms,of
R321 T709 T705 aux has,associated
R322 T710 T705 auxpass been,associated
R323 T711 T705 prep with,associated
R324 T712 T713 det the,generation
R325 T713 T711 pobj generation,with
R326 T714 T713 prep of,generation
R327 T715 T716 compound gene,families
R328 T716 T714 pobj families,of
R329 T717 T705 prep by,associated
R330 T718 T719 det the,duplication
R331 T719 T717 pobj duplication,by
R332 T720 T719 amod continual,duplication
R333 T721 T719 prep of,duplication
R334 T722 T723 det an,set
R335 T723 T721 pobj set,of
R336 T724 T723 amod initial,set
R337 T725 T726 advmod relatively,small
R338 T726 T723 amod small,set
R339 T727 T723 prep of,set
R340 T728 T729 amod ancestral,genes
R341 T729 T727 pobj genes,of
R342 T730 T705 punct .,associated
R343 T732 T733 prep Through,evolved
R344 T734 T735 det this,process
R345 T735 T732 pobj process,Through
R346 T736 T735 punct ", ",process
R347 T737 T735 acl followed,process
R348 T738 T737 agent by,followed
R349 T739 T740 amod subsequent,mutation
R350 T740 T738 pobj mutation,by
R351 T741 T740 punct ", ",mutation
R352 T742 T740 conj reduplication,mutation
R353 T743 T742 cc and,reduplication
R354 T744 T745 compound exon,shuffling
R355 T745 T742 conj shuffling,reduplication
R356 T746 T740 prep between,mutation
R357 T747 T748 compound gene,families
R358 T748 T746 pobj families,between
R359 T749 T733 punct ", ",evolved
R360 T750 T733 nsubj genes,evolved
R361 T751 T733 aux have,evolved
R362 T752 T753 preconj both,discrete
R363 T753 T754 amod discrete,functions
R364 T754 T733 dobj functions,evolved
R365 T755 T753 punct ", ",discrete
R366 T756 T753 cc and,discrete
R367 T757 T758 advmod partially,redundant
R368 T758 T753 conj redundant,discrete
R369 T759 T754 prep with,functions
R370 T760 T761 poss their,members
R371 T761 T759 pobj members,with
R372 T762 T761 amod related,members
R373 T763 T761 compound family,members
R374 T764 T733 punct .,evolved
R375 T766 T767 prep With,are
R376 T768 T769 det the,completion
R377 T769 T766 pobj completion,With
R378 T770 T769 prep of,completion
R379 T771 T772 det the,projects
R380 T772 T770 pobj projects,of
R381 T773 T774 compound genome,sequencing
R382 T774 T772 compound sequencing,projects
R383 T775 T772 prep of,projects
R384 T776 T775 pobj human,of
R385 T777 T776 punct ", ",human
R386 T778 T776 conj mouse,human
R387 T779 T778 punct ", ",mouse
R388 T780 T778 conj rat,mouse
R389 T781 T780 punct ", ",rat
R390 T782 T783 compound fruit,fly
R391 T783 T780 conj fly,rat
R392 T784 T783 cc and,fly
R393 T785 T783 conj nematodes,fly
R394 T786 T767 punct ", ",are
R395 T787 T767 nsubj we,are
R396 T788 T767 advmod now,are
R397 T789 T767 prep in,are
R398 T790 T791 det a,position
R399 T791 T789 pobj position,in
R400 T792 T793 aux to,ask
R401 T793 T791 acl ask,position
R402 T794 T795 amod fundamental,questions
R403 T795 T793 dobj questions,ask
R404 T796 T793 prep in,ask
R405 T797 T796 pobj regard,in
R406 T798 T797 prep to,regard
R407 T799 T800 advmod how,interact
R408 T800 T798 pcomp interact,to
R409 T801 T800 nsubj genes,interact
R410 T802 T800 prep in,interact
R411 T803 T804 det the,context
R412 T804 T802 pobj context,in
R413 T805 T804 prep of,context
R414 T806 T807 det the,organism
R415 T807 T805 pobj organism,of
R416 T808 T807 amod whole,organism
R417 T809 T767 punct .,are
R418 T811 T812 advmod Thus,is
R419 T813 T812 punct ", ",is
R420 T814 T812 prep with,is
R421 T815 T816 det the,application
R422 T816 T814 pobj application,with
R423 T817 T816 amod appropriate,application
R424 T818 T816 prep of,application
R425 T819 T818 pobj bioinformatics,of
R426 T820 T812 punct ", ",is
R427 T821 T812 nsubj it,is
R428 T822 T812 advmod now,is
R429 T823 T812 acomp possible,is
R430 T824 T825 aux to,trace
R431 T825 T812 xcomp trace,is
R432 T826 T827 det the,lineage
R433 T827 T825 dobj lineage,trace
R434 T828 T827 prep of,lineage
R435 T829 T830 amod particular,genes
R436 T830 T828 pobj genes,of
R437 T831 T830 cc and,genes
R438 T832 T833 compound gene,families
R439 T833 T830 conj families,genes
R440 T834 T825 punct ", ",trace
R441 T835 T825 prep with,trace
R442 T836 T837 amod related,families
R443 T837 T835 pobj families,with
R444 T838 T837 compound gene,families
R445 T839 T837 prep in,families
R446 T840 T841 amod other,organisms
R447 T841 T839 pobj organisms,in
R448 T842 T812 punct .,is
R449 T844 T845 advmod Furthermore,extended
R450 T846 T845 punct ", ",extended
R451 T847 T845 prep with,extended
R452 T848 T849 det the,amount
R453 T849 T851 nsubj amount,becoming
R454 T850 T849 amod growing,amount
R455 T851 T847 pcomp becoming,with
R456 T852 T849 prep of,amount
R457 T853 T854 amod large,scale
R458 T854 T856 nmod scale,data
R459 T855 T854 punct -,scale
R460 T856 T852 pobj data,of
R461 T857 T856 amod proteomic,data
R462 T858 T857 cc and,proteomic
R463 T859 T857 conj genomic,proteomic
R464 T860 T861 advmod publicly,available
R465 T861 T851 acomp available,becoming
R466 T862 T845 punct ", ",extended
R467 T863 T864 det this,analysis
R468 T864 T845 nsubjpass analysis,extended
R469 T865 T845 aux can,extended
R470 T866 T845 advmod now,extended
R471 T867 T845 auxpass be,extended
R472 T868 T869 aux to,reveal
R473 T869 T845 advcl reveal,extended
R474 T870 T871 det the,interplay
R475 T871 T869 dobj interplay,reveal
R476 T872 T871 amod complex,interplay
R477 T873 T871 prep between,interplay
R478 T874 T873 pobj evolution,between
R479 T875 T874 prep of,evolution
R480 T876 T877 compound gene,structure
R481 T877 T875 pobj structure,of
R482 T878 T874 cc and,evolution
R483 T879 T880 compound protein,function
R484 T880 T874 conj function,evolution
R485 T881 T845 punct .,extended
R486 T883 T884 det The,gene
R488 T885 T884 amod first,gene
R489 T886 T884 nmod Transforming,gene
R490 T887 T884 amod acidic,gene
R491 T888 T889 amod coiled,coil
R492 T889 T884 compound coil,gene
R493 T891 T884 punct ", ",gene
R494 T892 T884 appos TACC1,gene
R495 T893 T890 punct ", ",identified
R496 T894 T890 auxpass was,identified
R497 T895 T890 prep during,identified
R498 T896 T897 det the,development
R499 T897 T895 pobj development,during
R500 T898 T897 prep of,development
R501 T899 T900 det an,map
R502 T900 T898 pobj map,of
R503 T901 T900 compound expression,map
R504 T902 T900 prep of,map
R505 T903 T904 det the,arm
R506 T904 T902 pobj arm,of
R507 T905 T904 amod proximal,arm
R508 T906 T904 amod short,arm
R509 T907 T904 prep of,arm
R510 T908 T909 amod human,chromosome
R511 T909 T907 pobj chromosome,of
R512 T910 T909 nummod 8,chromosome
R513 T911 T912 punct [,1
R514 T912 T890 parataxis 1,identified
R515 T913 T912 punct ],1
R516 T914 T890 punct .,identified
R517 T916 T917 nummod Two,members
R518 T917 T921 nsubjpass members,identified
R519 T918 T917 amod additional,members
R520 T919 T917 compound TACC,members
R521 T920 T917 compound family,members
R522 T922 T921 auxpass were,identified
R523 T923 T921 advmod subsequently,identified
R524 T924 T921 cc and,identified
R525 T925 T921 conj mapped,identified
R526 T926 T925 prep to,mapped
R527 T927 T928 amod paralogous,regions
R528 T928 T926 pobj regions,to
R529 T929 T928 amod chromosomal,regions
R530 T930 T928 prep on,regions
R531 T931 T932 amod human,4p16
R532 T932 T930 pobj 4p16,on
R533 T933 T932 compound chromosomes,4p16
R534 T934 T932 cc and,4p16
R535 T935 T932 conj 10q26,4p16
R536 T936 T932 punct ", ",4p16
R537 T937 T938 advmod physically,close
R538 T938 T932 amod close,4p16
R539 T939 T938 prep to,close
R540 T940 T939 pobj members,to
R541 T941 T940 prep of,members
R542 T942 T943 det the,family
R543 T943 T941 pobj family,of
R544 T944 T943 compound FGFR,family
R545 T945 T943 compound gene,family
R546 T946 T947 punct [,1
R547 T947 T925 parataxis 1,mapped
R548 T948 T949 punct -,3
R549 T949 T947 prep 3,1
R550 T950 T947 punct ],1
R551 T951 T921 punct .,identified
R552 T953 T954 det This,data
R553 T954 T956 nsubj data,led
R554 T955 T954 compound mapping,data
R555 T957 T954 punct ", ",data
R556 T958 T959 advmod together,with
R557 T959 T954 prep with,data
R558 T960 T959 pobj identification,with
R559 T961 T960 prep of,identification
R560 T962 T963 det a,gene
R561 T963 T961 pobj gene,of
R562 T964 T963 amod single,gene
R563 T965 T963 compound TACC,gene
R564 T966 T960 prep in,identification
R565 T967 T968 det the,elegans
R566 T968 T966 pobj elegans,in
R567 T969 T968 compound protostomes,elegans
R568 T970 T968 compound Caenorhabitis,elegans
R569 T971 T968 punct ", ",elegans
R570 T972 T968 cc and,elegans
R571 T973 T974 compound Drosophila,melanogaster
R572 T974 T968 conj melanogaster,elegans
R573 T975 T976 punct [,4
R574 T976 T954 parataxis 4,data
R575 T977 T978 punct -,6
R576 T978 T976 prep 6,4
R577 T979 T976 punct ],4
R578 T980 T956 punct ", ",led
R579 T981 T956 prep to,led
R580 T982 T983 det the,speculation
R581 T983 T981 pobj speculation,to
R582 T984 T985 mark that,located
R583 T985 T983 acl located,speculation
R584 T986 T987 det the,genes
R585 T987 T985 nsubjpass genes,located
R586 T988 T987 amod ancestral,genes
R587 T989 T987 nmod FGFR,genes
R588 T990 T989 cc and,FGFR
R589 T991 T989 conj TACC,FGFR
R590 T992 T985 auxpass were,located
R591 T993 T994 advmod physically,close
R592 T994 T985 advmod close,located
R593 T995 T994 prep to,close
R594 T996 T997 det each,other
R595 T997 T995 pobj other,to
R596 T998 T956 punct .,led
R597 T1000 T1001 advmod Thus,given
R598 T1002 T1001 punct ", ",given
R599 T1003 T1001 prep during,given
R600 T1004 T1005 det the,evolution
R601 T1005 T1003 pobj evolution,during
R602 T1006 T1005 prep of,evolution
R603 T1007 T1006 pobj vertebrates,of
R604 T1008 T1001 punct ", ",given
R605 T1009 T1010 amod subsequent,duplications
R606 T1010 T1001 nsubj duplications,given
R607 T1011 T1010 amod successive,duplications
R608 T1012 T1010 prep of,duplications
R609 T1013 T1014 det the,cluster
R610 T1014 T1012 pobj cluster,of
R611 T1015 T1014 amod ancestral,cluster
R612 T1016 T1014 compound gene,cluster
R613 T1017 T1001 aux have,given
R614 T1018 T1001 dobj rise,given
R615 T1019 T1001 prep to,given
R616 T1020 T1021 nummod three,members
R617 T1021 T1019 pobj members,to
R618 T1022 T1021 compound TACC,members
R619 T1023 T1021 compound family,members
R620 T1024 T1021 acl located,members
R621 T1025 T1024 advmod close,located
R622 T1026 T1025 prep to,close
R623 T1027 T1028 compound FGFR,genes
R624 T1028 T1026 pobj genes,to
R625 T1029 T1024 prep in,located
R626 T1030 T1029 pobj humans,in
R627 T1031 T1001 punct .,given
R628 T1033 T1034 prep In,is
R629 T1035 T1033 pobj accordance,In
R630 T1036 T1035 prep with,accordance
R631 T1037 T1038 det the,quadruplication
R632 T1038 T1036 pobj quadruplication,with
R633 T1039 T1038 amod proposed,quadruplication
R634 T1040 T1038 prep of,quadruplication
R635 T1041 T1042 det the,genome
R636 T1042 T1040 pobj genome,of
R637 T1043 T1042 compound vertebrate,genome
R638 T1044 T1038 prep during,quadruplication
R639 T1045 T1044 pobj evolution,during
R640 T1046 T1034 punct ", ",is
R641 T1047 T1034 expl there,is
R642 T1048 T1049 det a,member
R643 T1049 T1034 attr member,is
R644 T1050 T1049 amod fourth,member
R645 T1051 T1049 compound FGFR,member
R646 T1052 T1049 compound family,member
R647 T1053 T1034 prep in,is
R648 T1054 T1053 pobj vertebrates,in
R649 T1055 T1034 punct ", ",is
R650 T1056 T1034 advcl raising,is
R651 T1057 T1058 det the,question
R652 T1058 T1056 dobj question,raising
R653 T1059 T1058 prep of,question
R654 T1060 T1061 mark whether,associated
R656 T1062 T1063 det a,gene
R657 T1063 T1061 nsubjpass gene,associated
R658 T1064 T1063 amod fourth,gene
R659 T1065 T1063 compound TACC,gene
R660 T1066 T1061 auxpass is,associated
R661 T1067 T1061 prep with,associated
R662 T1068 T1067 pobj FGFR4,with
R663 T1069 T1061 prep in,associated
R664 T1070 T1071 compound vertebrate,genomes
R665 T1071 T1069 pobj genomes,in
R666 T1072 T1034 punct .,is
R667 T1074 T1075 prep To,one
R668 T1076 T1074 pobj date,To
R669 T1077 T1075 punct ", ",one
R670 T1078 T1079 advmod only,genes
R671 T1079 T1083 nsubjpass genes,cloned
R672 T1080 T1079 nummod three,genes
R673 T1081 T1079 amod active,genes
R674 T1082 T1079 compound TACC,genes
R675 T1083 T1075 ccomp cloned,one
R676 T1084 T1083 aux have,cloned
R677 T1085 T1083 auxpass been,cloned
R678 T1086 T1083 prep in,cloned
R679 T1087 T1086 pobj humans,in
R680 T1088 T1089 punct [,1
R681 T1089 T1083 parataxis 1,cloned
R682 T1090 T1091 punct -,3
R683 T1091 T1089 prep 3,1
R684 T1092 T1089 punct ],1
R685 T1093 T1075 punct ", ",one
R686 T1094 T1075 prep in,one
R687 T1095 T1094 pobj each,in
R688 T1096 T1095 prep of,each
R689 T1097 T1096 pobj mouse,of
R690 T1098 T1099 punct [,7
R691 T1099 T1097 parataxis 7,mouse
R692 T1100 T1099 punct ],7
R693 T1101 T1097 punct ", ",mouse
R694 T1102 T1103 compound Xenopus,laevis
R695 T1103 T1097 conj laevis,mouse
R696 T1104 T1105 punct [,8
R697 T1105 T1103 parataxis 8,laevis
R698 T1106 T1105 punct ],8
R699 T1107 T1103 punct ", ",laevis
R700 T1108 T1109 compound D.,melanogaster
R701 T1109 T1103 conj melanogaster,laevis
R702 T1110 T1111 punct [,4
R703 T1111 T1109 parataxis 4,melanogaster
R704 T1112 T1111 punct ],4
R705 T1113 T1109 punct ", ",melanogaster
R706 T1114 T1109 cc and,melanogaster
R707 T1115 T1116 compound C.,elegans
R708 T1116 T1109 conj elegans,melanogaster
R709 T1117 T1118 punct [,6
R710 T1118 T1116 parataxis 6,elegans
R711 T1119 T1118 nummod 5,6
R712 T1120 T1118 punct ",",6
R713 T1121 T1118 punct ],6
R714 T1122 T1075 punct .,one
R715 T1124 T1125 mark Although,proposed
R716 T1125 T1148 advcl proposed,is
R717 T1126 T1127 nummod two,members
R718 T1127 T1125 nsubjpass members,proposed
R719 T1128 T1127 amod additional,members
R720 T1129 T1127 amod new,members
R721 T1130 T1127 compound candidate,members
R722 T1131 T1127 compound TACC,members
R723 T1132 T1127 compound family,members
R724 T1133 T1127 punct ", ",members
R725 T1134 T1135 compound Oryctolagus,TACC4
R726 T1135 T1127 appos TACC4,members
R727 T1136 T1135 compound cuniculus,TACC4
R728 T1137 T1138 punct [,9
R729 T1138 T1135 parataxis 9,TACC4
R730 T1139 T1138 punct ],9
R731 T1140 T1135 cc and,TACC4
R732 T1141 T1142 amod human,RHAMM
R733 T1142 T1135 conj RHAMM,TACC4
R734 T1143 T1144 punct [,10
R735 T1144 T1142 parataxis 10,RHAMM
R736 T1145 T1144 punct ],10
R737 T1146 T1125 aux have,proposed
R738 T1147 T1125 auxpass been,proposed
R739 T1149 T1148 punct ", ",is
R740 T1150 T1151 poss their,identity
R741 T1151 T1148 nsubj identity,is
R742 T1152 T1151 amod true,identity
R743 T1153 T1151 cc and,identity
R744 T1154 T1151 conj placement,identity
R745 T1155 T1151 prep in,identity
R746 T1156 T1157 det the,evolution
R747 T1157 T1155 pobj evolution,in
R748 T1158 T1157 prep of,evolution
R749 T1159 T1160 det the,family
R750 T1160 T1158 pobj family,of
R751 T1161 T1160 compound TACC,family
R752 T1162 T1148 prep under,is
R753 T1163 T1162 pobj debate,under
R754 T1164 T1148 punct .,is
R755 T1166 T1167 advmod Thus,resolve
R756 T1168 T1167 punct ", ",resolve
R757 T1169 T1170 det the,identification
R758 T1170 T1167 nsubj identification,resolve
R759 T1171 T1170 cc and,identification
R760 T1172 T1173 amod functional,characterization
R761 T1173 T1170 conj characterization,identification
R762 T1174 T1170 prep of,identification
R763 T1175 T1176 amod new,members
R764 T1176 T1174 pobj members,of
R765 T1177 T1176 prep of,members
R766 T1178 T1179 det the,family
R767 T1179 T1177 pobj family,of
R768 T1180 T1179 compound TACC,family
R769 T1181 T1170 prep in,identification
R770 T1182 T1183 amod other,organisms
R771 T1183 T1181 pobj organisms,in
R772 T1184 T1170 punct ", ",identification
R773 T1185 T1186 advmod alternatively,spliced
R774 T1186 T1187 amod spliced,isoforms
R775 T1187 T1170 conj isoforms,identification
R776 T1188 T1187 prep of,isoforms
R777 T1189 T1190 det each,TACC
R778 T1190 T1188 pobj TACC,of
R779 T1191 T1187 cc and,isoforms
R780 T1192 T1187 conj comparison,isoforms
R781 T1193 T1192 prep of,comparison
R782 T1194 T1195 det the,relationship
R783 T1195 T1193 pobj relationship,of
R784 T1196 T1195 amod phylogenetic,relationship
R785 T1197 T1195 prep of,relationship
R786 T1198 T1199 det these,genes
R787 T1199 T1197 pobj genes,of
R788 T1200 T1195 amod relative,relationship
R789 T1201 T1200 prep to,relative
R790 T1202 T1203 amod other,members
R791 T1203 T1201 pobj members,to
R792 T1204 T1203 prep of,members
R793 T1205 T1206 det the,superfamily
R794 T1206 T1204 pobj superfamily,of
R795 T1207 T1208 amod coiled,coil
R796 T1208 T1206 compound coil,superfamily
R797 T1209 T1167 aux will,resolve
R798 T1210 T1211 det this,issue
R799 T1211 T1167 dobj issue,resolve
R800 T1212 T1167 cc and,resolve
R801 T1213 T1167 conj provide,resolve
R802 T1214 T1213 dobj clues,provide
R803 T1215 T1214 prep to,clues
R804 T1216 T1217 det the,evolution
R805 T1217 T1215 pobj evolution,to
R806 T1218 T1217 prep of,evolution
R807 T1219 T1220 compound TACC,function
R808 T1220 T1218 pobj function,of
R809 T1221 T1167 punct .,resolve
R487 T884 T890 nsubjpass gene,identified
R655 T1061 T1059 pcomp associated,of

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T625 36-45 NCBITaxon:1 denotes organisms
T626 89-93 SO_EXT:0000704 denotes gene
T627 120-131 SO_EXT:sequence_duplication_entity_or_process denotes duplication
T628 180-185 SO_EXT:0000704 denotes genes
T629 232-240 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T630 244-255 SO_EXT:sequence_duplication_entity_or_process denotes duplication
T631 260-264 SO_EXT:0000147 denotes exon
T632 283-287 SO_EXT:0000704 denotes gene
T633 298-303 SO_EXT:0000704 denotes genes
T634 428-434 SO_EXT:0001026 denotes genome
T635 458-463 NCBITaxon:9606 denotes human
T636 465-470 NCBITaxon:10088 denotes mouse
T637 472-475 NCBITaxon:10114 denotes rat
T638 477-486 NCBITaxon:7215 denotes fruit fly
T639 491-500 NCBITaxon:6231 denotes nematodes
T640 573-578 SO_EXT:0000704 denotes genes
T641 616-624 NCBITaxon:1 denotes organism
T642 738-743 SO_EXT:0000704 denotes genes
T643 748-752 SO_EXT:0000704 denotes gene
T644 776-780 SO_EXT:0000704 denotes gene
T645 799-808 NCBITaxon:1 denotes organisms
T646 876-883 SO_EXT:0001026 denotes genomic
T647 1005-1009 SO_EXT:0000704 denotes gene
T648 1024-1031 CHEBI_PR_EXT:protein denotes protein
T649 1065-1071 CHEBI_EXT:37527 denotes acidic
T650 1072-1083 SO_EXT:0001080 denotes coiled coil
T651 1084-1088 SO_EXT:0000704 denotes gene
T652 1090-1095 PR_EXT:000016006 denotes TACC1
T653 1141-1151 GO:0010467 denotes expression
T654 1141-1155 SO_EXT:0001428 denotes expression map
T655 1178-1184 _FRAGMENT denotes arm of
T656 1191-1201 SO_EXT:0000105 denotes chromosome
T657 1185-1190 NCBITaxon:9606 denotes human
T658 1191-1201 GO_SO_EXT:chromosome denotes chromosome
T659 1287-1297 _FRAGMENT denotes paralogous
T660 1310-1317 SO_EXT:0000854 denotes regions
T661 1298-1317 GO_SO_EXT:chromosomal_part_or_position_or_region_or_site denotes chromosomal regions
T662 1310-1320 _FRAGMENT denotes regions on
T663 1327-1338 GO_SO_EXT:chromosomal_part_or_position_or_region_or_site denotes chromosomes
T664 1321-1326 NCBITaxon:9606 denotes human
T665 1327-1338 GO_SO_EXT:chromosome denotes chromosomes
T666 1390-1394 GO_PR_EXT:fibroblast_growth_factor_receptor denotes FGFR
T667 1395-1399 SO_EXT:0000704 denotes gene
T668 1479-1483 SO_EXT:0000704 denotes gene
T669 1491-1502 NCBITaxon:33317 denotes protostomes
T670 1503-1524 NCBITaxon:6239 denotes Caenorhabitis elegans
T671 1530-1553 NCBITaxon:7227 denotes Drosophila melanogaster
T672 1603-1607 GO_PR_EXT:fibroblast_growth_factor_receptor denotes FGFR
T673 1617-1622 SO_EXT:0000704 denotes genes
T674 1698-1709 NCBITaxon:7742 denotes vertebrates
T675 1733-1745 SO_EXT:sequence_duplication_entity_or_process denotes duplications
T676 1763-1767 SO_EXT:0000704 denotes gene
T677 1838-1842 GO_PR_EXT:fibroblast_growth_factor_receptor denotes FGFR
T678 1843-1848 SO_EXT:0000704 denotes genes
T679 1852-1858 NCBITaxon:9606 denotes humans
T680 1915-1925 NCBITaxon:7742 denotes vertebrate
T681 1926-1932 SO_EXT:0001026 denotes genome
T682 1969-1973 GO_PR_EXT:fibroblast_growth_factor_receptor denotes FGFR
T683 1991-2002 NCBITaxon:7742 denotes vertebrates
T684 2050-2054 SO_EXT:0000704 denotes gene
T685 2074-2079 PR_EXT:000001451 denotes FGFR4
T686 2083-2093 NCBITaxon:7742 denotes vertebrate
T687 2094-2101 SO_EXT:0001026 denotes genomes
T688 2135-2140 SO_EXT:0000704 denotes genes
T689 2151-2157 SO_EXT:sequence_cloning_process denotes cloned
T690 2161-2167 NCBITaxon:9606 denotes humans
T691 2190-2195 NCBITaxon:10088 denotes mouse
T692 2201-2215 NCBITaxon:8355 denotes Xenopus laevis
T693 2221-2236 NCBITaxon:7227 denotes D. melanogaster
T694 2246-2256 NCBITaxon:6239 denotes C. elegans
T695 2323-2344 NCBITaxon:9986 denotes Oryctolagus cuniculus
T696 2359-2364 NCBITaxon:9606 denotes human
T697 2365-2370 PR_EXT:000001856 denotes RHAMM
T698 2583-2592 NCBITaxon:1 denotes organisms
T699 2594-2615 GO:0000380 denotes alternatively spliced
T700 2594-2624 SO_EXT:alternative_splice_variant denotes alternatively spliced isoforms
T701 2695-2700 SO_EXT:0000704 denotes genes
T702 2734-2745 SO_EXT:0001080 denotes coiled coil
R313 T656 T655 _lexicallyChainedTo chromosome,arm of
R314 T660 T659 _lexicallyChainedTo regions,paralogous
R315 T663 T662 _lexicallyChainedTo chromosomes,regions on

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T563 36-45 NCBITaxon:1 denotes organisms
T564 89-93 SO:0000704 denotes gene
T565 180-185 SO:0000704 denotes genes
T566 260-264 SO:0000147 denotes exon
T567 283-287 SO:0000704 denotes gene
T568 298-303 SO:0000704 denotes genes
T569 428-434 SO:0001026 denotes genome
T570 458-463 NCBITaxon:9606 denotes human
T571 465-470 NCBITaxon:10088 denotes mouse
T572 472-475 NCBITaxon:10114 denotes rat
T573 477-486 NCBITaxon:7215 denotes fruit fly
T574 491-500 NCBITaxon:6231 denotes nematodes
T575 573-578 SO:0000704 denotes genes
T576 616-624 NCBITaxon:1 denotes organism
T577 738-743 SO:0000704 denotes genes
T578 748-752 SO:0000704 denotes gene
T579 776-780 SO:0000704 denotes gene
T580 799-808 NCBITaxon:1 denotes organisms
T581 876-883 SO:0001026 denotes genomic
T582 1005-1009 SO:0000704 denotes gene
T583 1065-1071 CHEBI:37527 denotes acidic
T584 1072-1083 SO:0001080 denotes coiled coil
T585 1084-1088 SO:0000704 denotes gene
T586 1090-1095 PR:000016006 denotes TACC1
T587 1141-1151 GO:0010467 denotes expression
T588 1141-1155 SO:0001428 denotes expression map
T589 1178-1184 _FRAGMENT denotes arm of
T590 1191-1201 SO:0000105 denotes chromosome
T591 1185-1190 NCBITaxon:9606 denotes human
T592 1287-1297 _FRAGMENT denotes paralogous
T593 1310-1317 SO:0000854 denotes regions
T594 1321-1326 NCBITaxon:9606 denotes human
T595 1395-1399 SO:0000704 denotes gene
T596 1479-1483 SO:0000704 denotes gene
T597 1491-1502 NCBITaxon:33317 denotes protostomes
T598 1503-1524 NCBITaxon:6239 denotes Caenorhabitis elegans
T599 1530-1553 NCBITaxon:7227 denotes Drosophila melanogaster
T600 1617-1622 SO:0000704 denotes genes
T601 1698-1709 NCBITaxon:7742 denotes vertebrates
T602 1763-1767 SO:0000704 denotes gene
T603 1843-1848 SO:0000704 denotes genes
T604 1852-1858 NCBITaxon:9606 denotes humans
T605 1915-1925 NCBITaxon:7742 denotes vertebrate
T606 1926-1932 SO:0001026 denotes genome
T607 1991-2002 NCBITaxon:7742 denotes vertebrates
T608 2050-2054 SO:0000704 denotes gene
T609 2074-2079 PR:000001451 denotes FGFR4
T610 2083-2093 NCBITaxon:7742 denotes vertebrate
T611 2094-2101 SO:0001026 denotes genomes
T612 2135-2140 SO:0000704 denotes genes
T613 2161-2167 NCBITaxon:9606 denotes humans
T614 2190-2195 NCBITaxon:10088 denotes mouse
T615 2201-2215 NCBITaxon:8355 denotes Xenopus laevis
T616 2221-2236 NCBITaxon:7227 denotes D. melanogaster
T617 2246-2256 NCBITaxon:6239 denotes C. elegans
T618 2323-2344 NCBITaxon:9986 denotes Oryctolagus cuniculus
T619 2359-2364 NCBITaxon:9606 denotes human
T620 2365-2370 PR:000001856 denotes RHAMM
T621 2583-2592 NCBITaxon:1 denotes organisms
T622 2594-2615 GO:0000380 denotes alternatively spliced
T623 2695-2700 SO:0000704 denotes genes
T624 2734-2745 SO:0001080 denotes coiled coil
R311 T590 T589 _lexicallyChainedTo chromosome,arm of
R312 T593 T592 _lexicallyChainedTo regions,paralogous

2_test

Id Subject Object Predicate Lexical cue
15207008-10435627-9665981 1205-1206 10435627 denotes 1
15207008-10435627-9665982 1408-1409 10435627 denotes 1
15207008-10366448-9665982 1408-1409 10366448 denotes 1
15207008-12620397-9665982 1408-1409 12620397 denotes 1
15207008-10637228-9665983 1555-1556 10637228 denotes 4
15207008-12956952-9665983 1555-1556 12956952 denotes 4
15207008-12956951-9665983 1555-1556 12956951 denotes 4
15207008-10435627-9665984 2169-2170 10435627 denotes 1
15207008-10366448-9665984 2169-2170 10366448 denotes 1
15207008-12620397-9665984 2169-2170 12620397 denotes 1
15207008-11025203-9665985 2197-2198 11025203 denotes 7
15207008-10635326-9665986 2217-2218 10635326 denotes 8
15207008-10637228-9665987 2238-2239 10637228 denotes 4
15207008-12956952-9665988 2258-2259 12956952 denotes 5
15207008-12956951-9665989 2260-2261 12956951 denotes 6
15207008-12015314-9665990 2352-2353 12015314 denotes 9
15207008-12808028-9665991 2372-2374 12808028 denotes 10