> top > docs > PMC:3589482 > spans > 6915-7153 > annotations

PMC:3589482 / 6915-7153 JSONTXT

Annnotations TAB JSON ListView MergeView

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4063 226-234 NN denotes sequence
T4062 222-225 NNP denotes DNA
T4061 218-221 NNP denotes The
T4060 209-217 NNP denotes Analysis
T4059 200-208 NNP denotes Sequence
T3794 193-194 . denotes .
T3793 192-193 -RRB- denotes )
T3792 182-192 NNPS denotes Biosystems
T3791 174-181 NNP denotes Applied
T3790 173-174 -LRB- denotes (
T3789 171-172 -RRB- denotes )
T3788 158-171 NNP denotes Mm00607939_s1
T3787 157-158 -LRB- denotes (
T3786 149-156 JJ denotes β-actin
T3785 145-148 CC denotes and
T3784 143-144 -RRB- denotes )
T3783 130-143 NNP denotes Mm00843434_s1
T3782 129-130 -LRB- denotes (
T3781 123-128 NNP denotes Cebpb
T3780 121-122 , denotes ,
T3779 120-121 -RRB- denotes )
T3778 107-120 NNP denotes Mm00440905_m1
T3777 106-107 -LRB- denotes (
T3776 88-105 NNP denotes Serpinb2/SerpinB2
T3775 84-87 IN denotes for
T3774 76-83 NNS denotes primers
T3773 72-75 NNP denotes 20X
T3772 61-71 NNP denotes Expression
T3771 56-60 NNP denotes Gene
T3770 54-55 NNP denotes ®
T3769 48-54 NNP denotes TaqMan
T3768 42-47 VBG denotes using
T3767 32-41 VBN denotes performed
T3766 28-31 VBD denotes was
T3765 23-27 NNP denotes qPCR
T3764 21-22 . denotes .
T3763 20-21 -RRB- denotes )
T3762 10-20 NNPS denotes Biosystems
T3761 2-9 NNP denotes Applied
T3760 1-2 -LRB- denotes (
T4064 235-237 IN denotes of
T4058 196-199 NNP denotes DNA
R2739 T3760 T3762 punct (,Biosystems
R2740 T3761 T3762 compound Applied,Biosystems
R2742 T3763 T3762 punct ),Biosystems
R2744 T3765 T3767 nsubjpass qPCR,performed
R2745 T3766 T3767 auxpass was,performed
R2746 T3767 T3767 ROOT performed,performed
R2747 T3768 T3767 advcl using,performed
R2748 T3769 T3773 compound TaqMan,20X
R2749 T3770 T3773 compound ®,20X
R2750 T3771 T3773 compound Gene,20X
R2751 T3772 T3773 compound Expression,20X
R2752 T3773 T3774 compound 20X,primers
R2753 T3774 T3768 dobj primers,using
R2754 T3775 T3768 prep for,using
R2755 T3776 T3775 pobj Serpinb2/SerpinB2,for
R2756 T3777 T3778 punct (,Mm00440905_m1
R2757 T3778 T3776 appos Mm00440905_m1,Serpinb2/SerpinB2
R2758 T3779 T3776 punct ),Serpinb2/SerpinB2
R2759 T3780 T3776 punct ",",Serpinb2/SerpinB2
R2760 T3781 T3776 conj Cebpb,Serpinb2/SerpinB2
R2761 T3782 T3783 punct (,Mm00843434_s1
R2762 T3783 T3781 appos Mm00843434_s1,Cebpb
R2763 T3784 T3783 punct ),Mm00843434_s1
R2764 T3785 T3781 cc and,Cebpb
R2765 T3786 T3781 conj β-actin,Cebpb
R2766 T3787 T3786 punct (,β-actin
R2767 T3788 T3786 appos Mm00607939_s1,β-actin
R2768 T3789 T3786 punct ),β-actin
R2769 T3790 T3792 punct (,Biosystems
R2770 T3791 T3792 compound Applied,Biosystems
R2771 T3792 T3786 appos Biosystems,β-actin
R2772 T3793 T3767 punct ),performed
R2773 T3794 T3767 punct .,performed
R2952 T4058 T4060 compound DNA,Analysis
R2953 T4059 T4060 compound Sequence,Analysis
R2955 T4061 T4063 det The,sequence
R2956 T4062 T4063 compound DNA,sequence
R2957 T4063 T4060 appos sequence,Analysis
R2958 T4064 T4063 prep of,sequence

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3673 174-175 -RRB- denotes A
T3672 164-174 NNP denotes 7939_s1) (
T3671 157-164 NNP denotes (Mm0060
T3670 155-156 -LRB- denotes n
T3669 154-155 -RRB- denotes i
T3668 141-154 NN denotes s1) and β-act
T3667 140-141 -LRB- denotes _
T3666 133-140 NN denotes 0843434
T3665 130-133 CC denotes Mm0
T3664 129-130 -RRB- denotes (
T3663 115-128 NN denotes 05_m1), Cebpb
T3662 114-115 -LRB- denotes 9
T3661 109-114 NN denotes 00440
T3660 108-109 -COMMA- denotes m
T3659 107-108 -RRB- denotes M
T3658 94-107 NN denotes b2/SerpinB2 (
T3657 93-94 -LRB- denotes n
T3656 76-93 NN denotes primers for Serpi
T3655 73-76 IN denotes 0X
T3654 66-73 NN denotes ssion 2
T3653 63-66 NN denotes pre
T3652 53-63 NN denotes n® Gene Ex
T3651 49-53 NNP denotes aqMa
T3650 42-49 NNP denotes using T
T3649 37-42 VB denotes rmed
T3648 28-37 VB denotes was perfo
T3647 25-28 VB denotes CR
T3646 21-25 NN denotes . qP
T3645 20-21 -RRB- denotes )
T3644 10-20 NNP denotes Biosystems
T3643 2-9 NNP denotes Applied
T3642 1-2 -LRB- denotes (
T3841 235-237 IN denotes of
T3840 226-234 NN denotes sequence
T3839 222-225 NN denotes DNA
T3838 218-221 DT denotes The
T3837 209-217 NN denotes Analysis
T3836 200-208 NN denotes Sequence
T3835 196-199 NN denotes DNA
R2663 T3644 T3642 arg2Of Biosystems,(
R2664 T3644 T3643 arg1Of Biosystems,Applied
R2665 T3645 T3642 arg3Of ),(
R2666 T3646 T3647 arg1Of . qP,CR
R2667 T3646 T3648 arg2Of . qP,was perfo
R2668 T3648 T3647 arg2Of was perfo,CR
R2669 T3649 T3648 arg3Of rmed ,was perfo
R2670 T3651 T3650 arg1Of aqMa,using T
R2671 T3654 T3649 arg2Of ssion 2,rmed
R2672 T3654 T3651 arg1Of ssion 2,aqMa
R2673 T3654 T3652 arg1Of ssion 2,n® Gene Ex
R2674 T3654 T3653 arg1Of ssion 2,pre
R2675 T3654 T3655 arg1Of ssion 2,0X
R2676 T3654 T3670 arg1Of ssion 2,n
R2677 T3656 T3657 arg1Of primers for Serpi,n
R2678 T3656 T3660 arg1Of primers for Serpi,m
R2679 T3658 T3657 arg2Of b2/SerpinB2 (,n
R2680 T3659 T3657 arg3Of M,n
R2681 T3660 T3665 arg1Of m,Mm0
R2682 T3661 T3660 arg2Of 00440,m
R2683 T3661 T3662 arg1Of 00440,9
R2684 T3663 T3662 arg2Of "05_m1), Cebpb",9
R2685 T3664 T3662 arg3Of (,9
R2686 T3665 T3655 arg2Of Mm0,0X
R2687 T3666 T3665 arg2Of 0843434,Mm0
R2688 T3666 T3667 arg1Of 0843434,_
R2689 T3668 T3667 arg2Of s1) and β-act,_
R2690 T3669 T3667 arg3Of i,_
R2691 T3672 T3670 arg2Of 7939_s1) (,n
R2692 T3672 T3671 arg1Of 7939_s1) (,(Mm0060
R2693 T3673 T3670 arg3Of A,n
R2778 T3837 T3835 arg1Of Analysis,DNA
R2779 T3837 T3836 arg1Of Analysis,Sequence
R2780 T3840 T3838 arg1Of sequence,The
R2781 T3840 T3839 arg1Of sequence,DNA
R2782 T3840 T3841 arg1Of sequence,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T3590 149-156 Protein denotes β-actin
T3589 123-128 Protein denotes Cebpb
T3588 97-105 Protein denotes SerpinB2
T3587 88-96 Protein denotes Serpinb2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3680 149-156 http://www.uniprot.org/uniprot/P60709 denotes β-actin
T3679 123-128 http://www.uniprot.org/uniprot/P28033 denotes Cebpb

GO-BP

Id Subject Object Predicate Lexical cue
T3594 56-71 http://purl.obolibrary.org/obo/GO_0010467 denotes Gene Expression

sentences

Id Subject Object Predicate Lexical cue
T3811 196-217 Sentence denotes DNA Sequence Analysis
T45 196-217 Sentence denotes DNA Sequence Analysis

simple1

Id Subject Object Predicate Lexical cue
T3603 149-156 Protein denotes β-actin
T3602 123-128 Protein denotes Cebpb
T3601 97-105 Protein denotes SerpinB2
T3600 88-96 Protein denotes Serpinb2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T3678 61-71 Gene_expression denotes Expression
T3677 149-156 Protein denotes β-actin
T3676 123-128 Protein denotes Cebpb
T3675 97-105 Protein denotes SerpinB2
T3674 88-96 Protein denotes Serpinb2
R2694 T3674 T3678 themeOf Serpinb2,Expression
R2695 T3675 T3678 themeOf SerpinB2,Expression
R2696 T3676 T3678 themeOf Cebpb,Expression
R2697 T3677 T3678 themeOf β-actin,Expression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T3692 149-156 Protein denotes β-actin
T3691 123-128 Protein denotes Cebpb
T3690 97-105 Protein denotes SerpinB2
T3689 88-96 Protein denotes Serpinb2

DLUT931

Id Subject Object Predicate Lexical cue
T3684 149-156 Protein denotes β-actin
T3683 123-128 Protein denotes Cebpb
T3682 97-105 Protein denotes SerpinB2
T3681 88-96 Protein denotes Serpinb2

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4056 196-199 Entity denotes DNA
T4048 222-225 Entity denotes DNA
T3719 48-83 Gene_expression denotes TaqMan® Gene Expression 20X primers
T3713 123-144 Protein denotes Cebpb (Mm00843434_s1)
T3711 149-172 Protein denotes β-actin (Mm00607939_s1)
T3710 48-60 Protein denotes TaqMan® Gene
T3707 88-122 Protein denotes Serpinb2/SerpinB2 (Mm00440905_m1),
R2698 T3710 T3719 themeOf TaqMan® Gene,TaqMan® Gene Expression 20X primers

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T3699 158-171 Protein denotes Mm00607939_s1
T3698 149-156 Protein denotes β-actin
T3697 130-143 Protein denotes Mm00843434_s1
T3696 123-128 Protein denotes Cebpb
T3695 107-120 Protein denotes Mm00440905_m1
T3694 97-105 Protein denotes SerpinB2
T3693 88-96 Protein denotes Serpinb2

testone

Id Subject Object Predicate Lexical cue
T3571 149-156 Protein denotes β-actin
T3570 123-128 Protein denotes Cebpb
T3569 97-105 Protein denotes SerpinB2
T3568 88-96 Protein denotes Serpinb2

test3

Id Subject Object Predicate Lexical cue
T3579 149-156 Protein denotes β-actin
T3578 123-128 Protein denotes Cebpb
T3577 97-105 Protein denotes SerpinB2
T3576 88-96 Protein denotes Serpinb2
T3575 149-156 Protein denotes β-actin
T3574 123-128 Protein denotes Cebpb
T3573 97-105 Protein denotes SerpinB2
T3572 88-96 Protein denotes Serpinb2