
PMC:3589482 / 585-759
Annnotations
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T856","span":{"begin":32,"end":40},"obj":"NN"},{"id":"T855","span":{"begin":23,"end":31},"obj":"CD"},{"id":"T854","span":{"begin":9,"end":22},"obj":"JJ"},{"id":"T853","span":{"begin":5,"end":8},"obj":"DT"},{"id":"T852","span":{"begin":1,"end":4},"obj":"VB"},{"id":"T881","span":{"begin":164,"end":172},"obj":"NN"},{"id":"T880","span":{"begin":156,"end":163},"obj":"JJ"},{"id":"T879","span":{"begin":152,"end":155},"obj":"CC"},{"id":"T878","span":{"begin":147,"end":151},"obj":"NN"},{"id":"T877","span":{"begin":138,"end":146},"obj":"NNP"},{"id":"T876","span":{"begin":131,"end":137},"obj":"NN"},{"id":"T875","span":{"begin":127,"end":130},"obj":"DT"},{"id":"T874","span":{"begin":124,"end":126},"obj":"IN"},{"id":"T873","span":{"begin":117,"end":123},"obj":"NN"},{"id":"T872","span":{"begin":108,"end":116},"obj":"VBG"},{"id":"T871","span":{"begin":107,"end":108},"obj":":"},{"id":"T870","span":{"begin":106,"end":107},"obj":"''"},{"id":"T869","span":{"begin":105,"end":106},"obj":"CD"},{"id":"T868","span":{"begin":102,"end":104},"obj":"NN"},{"id":"T867","span":{"begin":100,"end":101},"obj":"CD"},{"id":"T866","span":{"begin":99,"end":100},"obj":"NN"},{"id":"T865","span":{"begin":95,"end":98},"obj":"DT"},{"id":"T864","span":{"begin":92,"end":94},"obj":"IN"},{"id":"T863","span":{"begin":85,"end":91},"obj":"VBN"},{"id":"T862","span":{"begin":74,"end":84},"obj":"NNS"},{"id":"T861","span":{"begin":65,"end":73},"obj":"NN"},{"id":"T860","span":{"begin":53,"end":64},"obj":"VBD"},{"id":"T859","span":{"begin":50,"end":52},"obj":"PRP"},{"id":"T858","span":{"begin":48,"end":49},"obj":","},{"id":"T857","span":{"begin":41,"end":48},"obj":"NNS"}],"relations":[{"id":"R439","pred":"advcl","subj":"T852","obj":"T860"},{"id":"R440","pred":"det","subj":"T853","obj":"T857"},{"id":"R441","pred":"amod","subj":"T854","obj":"T857"},{"id":"R442","pred":"nummod","subj":"T855","obj":"T857"},{"id":"R443","pred":"compound","subj":"T856","obj":"T857"},{"id":"R444","pred":"dobj","subj":"T857","obj":"T852"},{"id":"R445","pred":"punct","subj":"T858","obj":"T860"},{"id":"R446","pred":"nsubj","subj":"T859","obj":"T860"},{"id":"R447","pred":"ROOT","subj":"T860","obj":"T860"},{"id":"R448","pred":"compound","subj":"T861","obj":"T862"},{"id":"R449","pred":"dobj","subj":"T862","obj":"T860"},{"id":"R450","pred":"acl","subj":"T863","obj":"T862"},{"id":"R451","pred":"agent","subj":"T864","obj":"T863"},{"id":"R452","pred":"det","subj":"T865","obj":"T873"},{"id":"R453","pred":"nmod","subj":"T866","obj":"T868"},{"id":"R454","pred":"nummod","subj":"T867","obj":"T866"},{"id":"R455","pred":"meta","subj":"T868","obj":"T872"},{"id":"R456","pred":"nummod","subj":"T869","obj":"T868"},{"id":"R457","pred":"punct","subj":"T870","obj":"T869"},{"id":"R458","pred":"punct","subj":"T871","obj":"T872"},{"id":"R459","pred":"amod","subj":"T872","obj":"T873"},{"id":"R460","pred":"pobj","subj":"T873","obj":"T864"},{"id":"R461","pred":"prep","subj":"T874","obj":"T873"},{"id":"R462","pred":"det","subj":"T875","obj":"T878"},{"id":"R463","pred":"compound","subj":"T876","obj":"T878"},{"id":"R464","pred":"compound","subj":"T877","obj":"T878"},{"id":"R465","pred":"pobj","subj":"T878","obj":"T874"},{"id":"R466","pred":"cc","subj":"T879","obj":"T878"}],"text":" map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine SerpinB2 gene and several deletion m"}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T338","span":{"begin":164,"end":172},"obj":"NN"},{"id":"T337","span":{"begin":156,"end":163},"obj":"JJ"},{"id":"T336","span":{"begin":152,"end":155},"obj":"CC"},{"id":"T335","span":{"begin":147,"end":151},"obj":"NN"},{"id":"T334","span":{"begin":138,"end":146},"obj":"NN"},{"id":"T333","span":{"begin":131,"end":137},"obj":"JJ"},{"id":"T332","span":{"begin":127,"end":130},"obj":"DT"},{"id":"T331","span":{"begin":124,"end":126},"obj":"IN"},{"id":"T330","span":{"begin":117,"end":123},"obj":"NN"},{"id":"T329","span":{"begin":105,"end":116},"obj":"JJ"},{"id":"T328","span":{"begin":102,"end":104},"obj":"NN"},{"id":"T327","span":{"begin":99,"end":101},"obj":"CD"},{"id":"T326","span":{"begin":95,"end":98},"obj":"DT"},{"id":"T325","span":{"begin":92,"end":94},"obj":"IN"},{"id":"T324","span":{"begin":85,"end":91},"obj":"VB"},{"id":"T323","span":{"begin":74,"end":84},"obj":"NN"},{"id":"T322","span":{"begin":65,"end":73},"obj":"NN"},{"id":"T321","span":{"begin":53,"end":64},"obj":"VB"},{"id":"T320","span":{"begin":50,"end":52},"obj":"PRP"},{"id":"T319","span":{"begin":48,"end":49},"obj":"-COMMA-"},{"id":"T318","span":{"begin":41,"end":48},"obj":"NN"},{"id":"T317","span":{"begin":32,"end":40},"obj":"NN"},{"id":"T316","span":{"begin":23,"end":31},"obj":"NN"},{"id":"T315","span":{"begin":9,"end":22},"obj":"JJ"},{"id":"T314","span":{"begin":5,"end":8},"obj":"DT"},{"id":"T313","span":{"begin":1,"end":4},"obj":"VB"}],"relations":[{"id":"R124","pred":"arg2Of","subj":"T318","obj":"T313"},{"id":"R125","pred":"arg1Of","subj":"T318","obj":"T314"},{"id":"R126","pred":"arg1Of","subj":"T318","obj":"T315"},{"id":"R127","pred":"arg1Of","subj":"T318","obj":"T316"},{"id":"R128","pred":"arg1Of","subj":"T318","obj":"T317"},{"id":"R129","pred":"arg1Of","subj":"T320","obj":"T313"},{"id":"R130","pred":"arg1Of","subj":"T320","obj":"T321"},{"id":"R132","pred":"arg1Of","subj":"T321","obj":"T319"},{"id":"R133","pred":"arg2Of","subj":"T323","obj":"T321"},{"id":"R134","pred":"arg1Of","subj":"T323","obj":"T322"},{"id":"R135","pred":"arg2Of","subj":"T323","obj":"T324"},{"id":"R136","pred":"arg1Of","subj":"T330","obj":"T324"},{"id":"R137","pred":"arg2Of","subj":"T330","obj":"T325"},{"id":"R138","pred":"arg1Of","subj":"T330","obj":"T326"},{"id":"R139","pred":"arg1Of","subj":"T330","obj":"T327"},{"id":"R140","pred":"arg1Of","subj":"T330","obj":"T328"},{"id":"R141","pred":"arg1Of","subj":"T330","obj":"T329"},{"id":"R142","pred":"arg1Of","subj":"T330","obj":"T331"},{"id":"R144","pred":"arg1Of","subj":"T335","obj":"T332"},{"id":"R145","pred":"arg1Of","subj":"T335","obj":"T333"},{"id":"R146","pred":"arg1Of","subj":"T335","obj":"T334"},{"id":"R147","pred":"arg1Of","subj":"T335","obj":"T336"},{"id":"R148","pred":"arg2Of","subj":"T336","obj":"T331"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":" map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine SerpinB2 gene and several deletion m"}
bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T165","span":{"begin":23,"end":31},"obj":"Protein"},{"id":"T166","span":{"begin":138,"end":146},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":" map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine SerpinB2 gene and several deletion m"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T532","span":{"begin":23,"end":31},"obj":"http://www.uniprot.org/uniprot/P05120"},{"id":"T533","span":{"begin":138,"end":146},"obj":"http://www.uniprot.org/uniprot/P05120"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":" map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine SerpinB2 gene and several deletion m"}
simple1
{"project":"simple1","denotations":[{"id":"T218","span":{"begin":23,"end":31},"obj":"Protein"},{"id":"T219","span":{"begin":138,"end":146},"obj":"Protein"}],"text":" map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine SerpinB2 gene and several deletion m"}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T500","span":{"begin":23,"end":31},"obj":"Protein"},{"id":"T499","span":{"begin":138,"end":146},"obj":"Protein"}],"text":" map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine SerpinB2 gene and several deletion m"}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T609","span":{"begin":138,"end":146},"obj":"Protein"},{"id":"T610","span":{"begin":23,"end":31},"obj":"Protein"}],"text":" map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine SerpinB2 gene and several deletion m"}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T575","span":{"begin":138,"end":146},"obj":"Protein"},{"id":"T576","span":{"begin":23,"end":31},"obj":"Protein"}],"text":" map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine SerpinB2 gene and several deletion m"}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T753","span":{"begin":138,"end":146},"obj":"Protein"},{"id":"T720","span":{"begin":23,"end":31},"obj":"Protein"},{"id":"T729","span":{"begin":5,"end":49},"obj":"Entity"},{"id":"T741","span":{"begin":9,"end":22},"obj":"Entity"},{"id":"T743","span":{"begin":124,"end":151},"obj":"Protein"}],"text":" map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine SerpinB2 gene and several deletion m"}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T649","span":{"begin":131,"end":151},"obj":"Protein"},{"id":"T648","span":{"begin":23,"end":40},"obj":"Protein"}],"text":" map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine SerpinB2 gene and several deletion m"}
testone
{"project":"testone","denotations":[{"id":"T29","span":{"begin":138,"end":146},"obj":"Protein"},{"id":"T28","span":{"begin":23,"end":31},"obj":"Protein"}],"text":" map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine SerpinB2 gene and several deletion m"}
test3
{"project":"test3","denotations":[{"id":"T80","span":{"begin":138,"end":146},"obj":"Protein"},{"id":"T79","span":{"begin":23,"end":31},"obj":"Protein"},{"id":"T58","span":{"begin":138,"end":146},"obj":"Protein"},{"id":"T57","span":{"begin":23,"end":31},"obj":"Protein"}],"text":" map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine SerpinB2 gene and several deletion m"}