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PMC:3589482 / 585-759 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T856 32-40 NN denotes promoter
T855 23-31 CD denotes SerpinB2
T854 9-22 JJ denotes LPS-regulated
T853 5-8 DT denotes the
T852 1-4 VB denotes map
T881 164-172 NN denotes deletion
T880 156-163 JJ denotes several
T879 152-155 CC denotes and
T878 147-151 NN denotes gene
T877 138-146 NNP denotes SerpinB2
T876 131-137 NN denotes murine
T875 127-130 DT denotes the
T874 124-126 IN denotes of
T873 117-123 NN denotes region
T872 108-116 VBG denotes flanking
T871 107-108 : denotes -
T870 106-107 '' denotes '
T869 105-106 CD denotes 5
T868 102-104 NN denotes kb
T867 100-101 CD denotes 5
T866 99-100 NN denotes ∼
T865 95-98 DT denotes the
T864 92-94 IN denotes by
T863 85-91 VBN denotes driven
T862 74-84 NNS denotes constructs
T861 65-73 NN denotes reporter
T860 53-64 VBD denotes transfected
T859 50-52 PRP denotes we
T858 48-49 , denotes ,
T857 41-48 NNS denotes regions
R439 T852 T860 advcl map,transfected
R440 T853 T857 det the,regions
R441 T854 T857 amod LPS-regulated,regions
R442 T855 T857 nummod SerpinB2,regions
R443 T856 T857 compound promoter,regions
R444 T857 T852 dobj regions,map
R445 T858 T860 punct ",",transfected
R446 T859 T860 nsubj we,transfected
R447 T860 T860 ROOT transfected,transfected
R448 T861 T862 compound reporter,constructs
R449 T862 T860 dobj constructs,transfected
R450 T863 T862 acl driven,constructs
R451 T864 T863 agent by,driven
R452 T865 T873 det the,region
R453 T866 T868 nmod ∼,kb
R454 T867 T866 nummod 5,∼
R455 T868 T872 meta kb,flanking
R456 T869 T868 nummod 5,kb
R457 T870 T869 punct ',5
R458 T871 T872 punct -,flanking
R459 T872 T873 amod flanking,region
R460 T873 T864 pobj region,by
R461 T874 T873 prep of,region
R462 T875 T878 det the,gene
R463 T876 T878 compound murine,gene
R464 T877 T878 compound SerpinB2,gene
R465 T878 T874 pobj gene,of
R466 T879 T878 cc and,gene

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T338 164-172 NN denotes deletion
T337 156-163 JJ denotes several
T336 152-155 CC denotes and
T335 147-151 NN denotes gene
T334 138-146 NN denotes SerpinB2
T333 131-137 JJ denotes murine
T332 127-130 DT denotes the
T331 124-126 IN denotes of
T330 117-123 NN denotes region
T329 105-116 JJ denotes 5'-flanking
T328 102-104 NN denotes kb
T327 99-101 CD denotes ∼5
T326 95-98 DT denotes the
T325 92-94 IN denotes by
T324 85-91 VB denotes driven
T323 74-84 NN denotes constructs
T322 65-73 NN denotes reporter
T321 53-64 VB denotes transfected
T320 50-52 PRP denotes we
T319 48-49 -COMMA- denotes ,
T318 41-48 NN denotes regions
T317 32-40 NN denotes promoter
T316 23-31 NN denotes SerpinB2
T315 9-22 JJ denotes LPS-regulated
T314 5-8 DT denotes the
T313 1-4 VB denotes map
R124 T318 T313 arg2Of regions,map
R125 T318 T314 arg1Of regions,the
R126 T318 T315 arg1Of regions,LPS-regulated
R127 T318 T316 arg1Of regions,SerpinB2
R128 T318 T317 arg1Of regions,promoter
R129 T320 T313 arg1Of we,map
R130 T320 T321 arg1Of we,transfected
R132 T321 T319 arg1Of transfected,","
R133 T323 T321 arg2Of constructs,transfected
R134 T323 T322 arg1Of constructs,reporter
R135 T323 T324 arg2Of constructs,driven
R136 T330 T324 arg1Of region,driven
R137 T330 T325 arg2Of region,by
R138 T330 T326 arg1Of region,the
R139 T330 T327 arg1Of region,∼5
R140 T330 T328 arg1Of region,kb
R141 T330 T329 arg1Of region,5'-flanking
R142 T330 T331 arg1Of region,of
R144 T335 T332 arg1Of gene,the
R145 T335 T333 arg1Of gene,murine
R146 T335 T334 arg1Of gene,SerpinB2
R147 T335 T336 arg1Of gene,and
R148 T336 T331 arg2Of and,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T165 23-31 Protein denotes SerpinB2
T166 138-146 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T532 23-31 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T533 138-146 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

simple1

Id Subject Object Predicate Lexical cue
T218 23-31 Protein denotes SerpinB2
T219 138-146 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T500 23-31 Protein denotes SerpinB2
T499 138-146 Protein denotes SerpinB2

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T609 138-146 Protein denotes SerpinB2
T610 23-31 Protein denotes SerpinB2

DLUT931

Id Subject Object Predicate Lexical cue
T575 138-146 Protein denotes SerpinB2
T576 23-31 Protein denotes SerpinB2

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T753 138-146 Protein denotes SerpinB2
T720 23-31 Protein denotes SerpinB2
T729 5-49 Entity denotes the LPS-regulated SerpinB2 promoter regions,
T741 9-22 Entity denotes LPS-regulated
T743 124-151 Protein denotes of the murine SerpinB2 gene

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T649 131-151 Protein denotes murine SerpinB2 gene
T648 23-40 Protein denotes SerpinB2 promoter

testone

Id Subject Object Predicate Lexical cue
T29 138-146 Protein denotes SerpinB2
T28 23-31 Protein denotes SerpinB2

test3

Id Subject Object Predicate Lexical cue
T80 138-146 Protein denotes SerpinB2
T79 23-31 Protein denotes SerpinB2
T58 138-146 Protein denotes SerpinB2
T57 23-31 Protein denotes SerpinB2