PMC:3589482 / 503-722
Annnotations
bionlp-st-ge-2016-spacy-parsed
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pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T307","span":{"begin":50,"end":52},"obj":"CD"},{"id":"T306","span":{"begin":47,"end":49},"obj":"IN"},{"id":"T305","span":{"begin":40,"end":46},"obj":"NN"},{"id":"T304","span":{"begin":38,"end":39},"obj":"DT"},{"id":"T303","span":{"begin":33,"end":37},"obj":"IN"},{"id":"T302","span":{"begin":22,"end":32},"obj":"RB"},{"id":"T301","span":{"begin":19,"end":21},"obj":"IN"},{"id":"T300","span":{"begin":17,"end":18},"obj":"-RRB-"},{"id":"T299","span":{"begin":13,"end":17},"obj":"NN"},{"id":"T298","span":{"begin":12,"end":13},"obj":"-LRB-"},{"id":"T297","span":{"begin":10,"end":11},"obj":"CD"},{"id":"T296","span":{"begin":1,"end":9},"obj":"NN"},{"id":"T333","span":{"begin":213,"end":219},"obj":"JJ"},{"id":"T332","span":{"begin":209,"end":212},"obj":"DT"},{"id":"T331","span":{"begin":206,"end":208},"obj":"IN"},{"id":"T330","span":{"begin":199,"end":205},"obj":"NN"},{"id":"T329","span":{"begin":187,"end":198},"obj":"JJ"},{"id":"T328","span":{"begin":184,"end":186},"obj":"NN"},{"id":"T327","span":{"begin":181,"end":183},"obj":"CD"},{"id":"T326","span":{"begin":177,"end":180},"obj":"DT"},{"id":"T325","span":{"begin":174,"end":176},"obj":"IN"},{"id":"T324","span":{"begin":167,"end":173},"obj":"VB"},{"id":"T323","span":{"begin":156,"end":166},"obj":"NN"},{"id":"T322","span":{"begin":147,"end":155},"obj":"NN"},{"id":"T321","span":{"begin":135,"end":146},"obj":"VB"},{"id":"T320","span":{"begin":132,"end":134},"obj":"PRP"},{"id":"T319","span":{"begin":130,"end":131},"obj":"-COMMA-"},{"id":"T318","span":{"begin":123,"end":130},"obj":"NN"},{"id":"T317","span":{"begin":114,"end":122},"obj":"NN"},{"id":"T316","span":{"begin":105,"end":113},"obj":"NN"},{"id":"T315","span":{"begin":91,"end":104},"obj":"JJ"},{"id":"T314","span":{"begin":87,"end":90},"obj":"DT"},{"id":"T313","span":{"begin":83,"end":86},"obj":"VB"},{"id":"T312","span":{"begin":80,"end":82},"obj":"TO"},{"id":"T311","span":{"begin":67,"end":78},"obj":"NN"},{"id":"T310","span":{"begin":60,"end":66},"obj":"JJ"},{"id":"T309","span":{"begin":57,"end":59},"obj":"IN"},{"id":"T308","span":{"begin":53,"end":56},"obj":"NN"}],"relations":[{"id":"R110","pred":"arg1Of","subj":"T296","obj":"T297"},{"id":"R111","pred":"arg1Of","subj":"T296","obj":"T298"},{"id":"R112","pred":"arg2Of","subj":"T299","obj":"T298"},{"id":"R113","pred":"arg3Of","subj":"T300","obj":"T298"},{"id":"R114","pred":"arg2Of","subj":"T302","obj":"T301"},{"id":"R115","pred":"arg2Of","subj":"T305","obj":"T303"},{"id":"R116","pred":"arg1Of","subj":"T305","obj":"T304"},{"id":"R117","pred":"arg1Of","subj":"T305","obj":"T306"},{"id":"R118","pred":"arg1Of","subj":"T305","obj":"T309"},{"id":"R119","pred":"arg2Of","subj":"T308","obj":"T306"},{"id":"R120","pred":"arg1Of","subj":"T308","obj":"T307"},{"id":"R121","pred":"arg2Of","subj":"T311","obj":"T309"},{"id":"R122","pred":"arg1Of","subj":"T311","obj":"T310"},{"id":"R123","pred":"arg1Of","subj":"T313","obj":"T312"},{"id":"R124","pred":"arg2Of","subj":"T318","obj":"T313"},{"id":"R125","pred":"arg1Of","subj":"T318","obj":"T314"},{"id":"R126","pred":"arg1Of","subj":"T318","obj":"T315"},{"id":"R127","pred":"arg1Of","subj":"T318","obj":"T316"},{"id":"R128","pred":"arg1Of","subj":"T318","obj":"T317"},{"id":"R129","pred":"arg1Of","subj":"T320","obj":"T313"},{"id":"R130","pred":"arg1Of","subj":"T320","obj":"T321"},{"id":"R131","pred":"modOf","subj":"T321","obj":"T312"},{"id":"R132","pred":"arg1Of","subj":"T321","obj":"T319"},{"id":"R133","pred":"arg2Of","subj":"T323","obj":"T321"},{"id":"R134","pred":"arg1Of","subj":"T323","obj":"T322"},{"id":"R135","pred":"arg2Of","subj":"T323","obj":"T324"},{"id":"R136","pred":"arg1Of","subj":"T330","obj":"T324"},{"id":"R137","pred":"arg2Of","subj":"T330","obj":"T325"},{"id":"R138","pred":"arg1Of","subj":"T330","obj":"T326"},{"id":"R139","pred":"arg1Of","subj":"T330","obj":"T327"},{"id":"R140","pred":"arg1Of","subj":"T330","obj":"T328"},{"id":"R141","pred":"arg1Of","subj":"T330","obj":"T329"},{"id":"R142","pred":"arg1Of","subj":"T330","obj":"T331"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":" receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine"}
bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T164","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T165","span":{"begin":105,"end":113},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":" receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T539","span":{"begin":13,"end":17},"obj":"http://www.uniprot.org/uniprot/O00206"},{"id":"T532","span":{"begin":105,"end":113},"obj":"http://www.uniprot.org/uniprot/P05120"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":" receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine"}
simple1
{"project":"simple1","denotations":[{"id":"T217","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T218","span":{"begin":105,"end":113},"obj":"Protein"}],"text":" receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine"}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T500","span":{"begin":105,"end":113},"obj":"Protein"},{"id":"T498","span":{"begin":13,"end":17},"obj":"Protein"}],"text":" receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine"}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T608","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T610","span":{"begin":105,"end":113},"obj":"Protein"}],"text":" receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine"}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T574","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T576","span":{"begin":105,"end":113},"obj":"Protein"}],"text":" receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine"}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T760","span":{"begin":50,"end":78},"obj":"Localization"},{"id":"T715","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T719","span":{"begin":50,"end":78},"obj":"Protein"},{"id":"T720","span":{"begin":105,"end":113},"obj":"Protein"},{"id":"T724","span":{"begin":60,"end":78},"obj":"Entity"},{"id":"T729","span":{"begin":87,"end":131},"obj":"Entity"},{"id":"T741","span":{"begin":91,"end":104},"obj":"Entity"}],"relations":[{"id":"R721","pred":"themeOf","subj":"T719","obj":"T760"},{"id":"R723","pred":"locationOf","subj":"T724","obj":"T760"}],"text":" receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine"}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T648","span":{"begin":105,"end":122},"obj":"Protein"}],"text":" receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine"}
testone
{"project":"testone","denotations":[{"id":"T28","span":{"begin":105,"end":113},"obj":"Protein"},{"id":"T27","span":{"begin":13,"end":17},"obj":"Protein"}],"text":" receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine"}
test3
{"project":"test3","denotations":[{"id":"T79","span":{"begin":105,"end":113},"obj":"Protein"},{"id":"T78","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T57","span":{"begin":105,"end":113},"obj":"Protein"},{"id":"T56","span":{"begin":13,"end":17},"obj":"Protein"}],"text":" receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine"}