PMC:3589482 / 489-657 JSONTXT

{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T856","span":{"begin":128,"end":136},"obj":"NN"},{"id":"T855","span":{"begin":119,"end":127},"obj":"CD"},{"id":"T854","span":{"begin":105,"end":118},"obj":"JJ"},{"id":"T853","span":{"begin":101,"end":104},"obj":"DT"},{"id":"T852","span":{"begin":97,"end":100},"obj":"VB"},{"id":"T851","span":{"begin":94,"end":96},"obj":"TO"},{"id":"T850","span":{"begin":92,"end":93},"obj":"."},{"id":"T849","span":{"begin":81,"end":92},"obj":"NNS"},{"id":"T848","span":{"begin":74,"end":80},"obj":"JJ"},{"id":"T847","span":{"begin":71,"end":73},"obj":"IN"},{"id":"T846","span":{"begin":67,"end":70},"obj":"NNS"},{"id":"T845","span":{"begin":64,"end":66},"obj":"CD"},{"id":"T844","span":{"begin":61,"end":63},"obj":"IN"},{"id":"T843","span":{"begin":54,"end":60},"obj":"NN"},{"id":"T842","span":{"begin":52,"end":53},"obj":"DT"},{"id":"T841","span":{"begin":47,"end":51},"obj":"IN"},{"id":"T840","span":{"begin":37,"end":46},"obj":"JJ"},{"id":"T839","span":{"begin":36,"end":37},"obj":"CD"},{"id":"T838","span":{"begin":33,"end":35},"obj":"IN"},{"id":"T837","span":{"begin":31,"end":32},"obj":"-RRB-"},{"id":"T836","span":{"begin":27,"end":31},"obj":"CD"},{"id":"T835","span":{"begin":26,"end":27},"obj":"-LRB-"},{"id":"T834","span":{"begin":24,"end":25},"obj":"CD"},{"id":"T833","span":{"begin":15,"end":23},"obj":"NN"},{"id":"T832","span":{"begin":5,"end":14},"obj":"JJ"},{"id":"T831","span":{"begin":1,"end":4},"obj":"DT"},{"id":"T860","span":{"begin":149,"end":160},"obj":"VBD"},{"id":"T859","span":{"begin":146,"end":148},"obj":"PRP"},{"id":"T858","span":{"begin":144,"end":145},"obj":","},{"id":"T857","span":{"begin":137,"end":144},"obj":"NNS"}],"relations":[{"id":"R418","pred":"det","subj":"T831","obj":"T833"},{"id":"R419","pred":"amod","subj":"T832","obj":"T833"},{"id":"R421","pred":"nummod","subj":"T834","obj":"T833"},{"id":"R422","pred":"punct","subj":"T835","obj":"T833"},{"id":"R423","pred":"appos","subj":"T836","obj":"T833"},{"id":"R424","pred":"punct","subj":"T837","obj":"T833"},{"id":"R426","pred":"pobj","subj":"T839","obj":"T838"},{"id":"R428","pred":"prep","subj":"T841","obj":"T840"},{"id":"R429","pred":"det","subj":"T842","obj":"T843"},{"id":"R430","pred":"pobj","subj":"T843","obj":"T841"},{"id":"R431","pred":"prep","subj":"T844","obj":"T843"},{"id":"R432","pred":"nummod","subj":"T845","obj":"T846"},{"id":"R433","pred":"pobj","subj":"T846","obj":"T844"},{"id":"R434","pred":"prep","subj":"T847","obj":"T846"},{"id":"R435","pred":"amod","subj":"T848","obj":"T849"},{"id":"R436","pred":"pobj","subj":"T849","obj":"T847"},{"id":"R438","pred":"aux","subj":"T851","obj":"T852"},{"id":"R439","pred":"advcl","subj":"T852","obj":"T860"},{"id":"R440","pred":"det","subj":"T853","obj":"T857"},{"id":"R441","pred":"amod","subj":"T854","obj":"T857"},{"id":"R442","pred":"nummod","subj":"T855","obj":"T857"},{"id":"R443","pred":"compound","subj":"T856","obj":"T857"},{"id":"R444","pred":"dobj","subj":"T857","obj":"T852"},{"id":"R445","pred":"punct","subj":"T858","obj":"T860"},{"id":"R446","pred":"nsubj","subj":"T859","obj":"T860"},{"id":"R447","pred":"ROOT","subj":"T860","obj":"T860"}],"text":" the toll-like receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporte"}

{"project":"pmc-enju-pas","denotations":[{"id":"T307","span":{"begin":64,"end":66},"obj":"CD"},{"id":"T306","span":{"begin":61,"end":63},"obj":"IN"},{"id":"T305","span":{"begin":54,"end":60},"obj":"NN"},{"id":"T304","span":{"begin":52,"end":53},"obj":"DT"},{"id":"T303","span":{"begin":47,"end":51},"obj":"IN"},{"id":"T302","span":{"begin":36,"end":46},"obj":"RB"},{"id":"T301","span":{"begin":33,"end":35},"obj":"IN"},{"id":"T300","span":{"begin":31,"end":32},"obj":"-RRB-"},{"id":"T299","span":{"begin":27,"end":31},"obj":"NN"},{"id":"T298","span":{"begin":26,"end":27},"obj":"-LRB-"},{"id":"T297","span":{"begin":24,"end":25},"obj":"CD"},{"id":"T296","span":{"begin":15,"end":23},"obj":"NN"},{"id":"T295","span":{"begin":5,"end":14},"obj":"JJ"},{"id":"T294","span":{"begin":1,"end":4},"obj":"DT"},{"id":"T321","span":{"begin":149,"end":160},"obj":"VB"},{"id":"T320","span":{"begin":146,"end":148},"obj":"PRP"},{"id":"T319","span":{"begin":144,"end":145},"obj":"-COMMA-"},{"id":"T318","span":{"begin":137,"end":144},"obj":"NN"},{"id":"T317","span":{"begin":128,"end":136},"obj":"NN"},{"id":"T316","span":{"begin":119,"end":127},"obj":"NN"},{"id":"T315","span":{"begin":105,"end":118},"obj":"JJ"},{"id":"T314","span":{"begin":101,"end":104},"obj":"DT"},{"id":"T313","span":{"begin":97,"end":100},"obj":"VB"},{"id":"T312","span":{"begin":94,"end":96},"obj":"TO"},{"id":"T311","span":{"begin":81,"end":92},"obj":"NN"},{"id":"T310","span":{"begin":74,"end":80},"obj":"JJ"},{"id":"T309","span":{"begin":71,"end":73},"obj":"IN"},{"id":"T308","span":{"begin":67,"end":70},"obj":"NN"}],"relations":[{"id":"R108","pred":"arg1Of","subj":"T296","obj":"T294"},{"id":"R109","pred":"arg1Of","subj":"T296","obj":"T295"},{"id":"R110","pred":"arg1Of","subj":"T296","obj":"T297"},{"id":"R111","pred":"arg1Of","subj":"T296","obj":"T298"},{"id":"R112","pred":"arg2Of","subj":"T299","obj":"T298"},{"id":"R113","pred":"arg3Of","subj":"T300","obj":"T298"},{"id":"R114","pred":"arg2Of","subj":"T302","obj":"T301"},{"id":"R115","pred":"arg2Of","subj":"T305","obj":"T303"},{"id":"R116","pred":"arg1Of","subj":"T305","obj":"T304"},{"id":"R117","pred":"arg1Of","subj":"T305","obj":"T306"},{"id":"R118","pred":"arg1Of","subj":"T305","obj":"T309"},{"id":"R119","pred":"arg2Of","subj":"T308","obj":"T306"},{"id":"R120","pred":"arg1Of","subj":"T308","obj":"T307"},{"id":"R121","pred":"arg2Of","subj":"T311","obj":"T309"},{"id":"R122","pred":"arg1Of","subj":"T311","obj":"T310"},{"id":"R123","pred":"arg1Of","subj":"T313","obj":"T312"},{"id":"R124","pred":"arg2Of","subj":"T318","obj":"T313"},{"id":"R125","pred":"arg1Of","subj":"T318","obj":"T314"},{"id":"R126","pred":"arg1Of","subj":"T318","obj":"T315"},{"id":"R127","pred":"arg1Of","subj":"T318","obj":"T316"},{"id":"R128","pred":"arg1Of","subj":"T318","obj":"T317"},{"id":"R129","pred":"arg1Of","subj":"T320","obj":"T313"},{"id":"R130","pred":"arg1Of","subj":"T320","obj":"T321"},{"id":"R131","pred":"modOf","subj":"T321","obj":"T312"},{"id":"R132","pred":"arg1Of","subj":"T321","obj":"T319"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":" the toll-like receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporte"}

{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T163","span":{"begin":5,"end":25},"obj":"Protein"},{"id":"T164","span":{"begin":27,"end":31},"obj":"Protein"},{"id":"T165","span":{"begin":119,"end":127},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":" the toll-like receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporte"}

{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T539","span":{"begin":27,"end":31},"obj":"http://www.uniprot.org/uniprot/O00206"},{"id":"T532","span":{"begin":119,"end":127},"obj":"http://www.uniprot.org/uniprot/P05120"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":" the toll-like receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporte"}

{"project":"simple1","denotations":[{"id":"T216","span":{"begin":5,"end":25},"obj":"Protein"},{"id":"T217","span":{"begin":27,"end":31},"obj":"Protein"},{"id":"T218","span":{"begin":119,"end":127},"obj":"Protein"}],"text":" the toll-like receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporte"}

{"project":"BioNLP16_DUT","denotations":[{"id":"T500","span":{"begin":119,"end":127},"obj":"Protein"},{"id":"T498","span":{"begin":27,"end":31},"obj":"Protein"},{"id":"T497","span":{"begin":5,"end":25},"obj":"Protein"}],"text":" the toll-like receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporte"}

{"project":"BioNLP16_Messiy","denotations":[{"id":"T607","span":{"begin":5,"end":25},"obj":"Protein"},{"id":"T608","span":{"begin":27,"end":31},"obj":"Protein"},{"id":"T610","span":{"begin":119,"end":127},"obj":"Protein"}],"text":" the toll-like receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporte"}

{"project":"DLUT931","denotations":[{"id":"T573","span":{"begin":5,"end":25},"obj":"Protein"},{"id":"T574","span":{"begin":27,"end":31},"obj":"Protein"},{"id":"T576","span":{"begin":119,"end":127},"obj":"Protein"}],"text":" the toll-like receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporte"}

{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T760","span":{"begin":64,"end":92},"obj":"Localization"},{"id":"T714","span":{"begin":1,"end":32},"obj":"Protein"},{"id":"T715","span":{"begin":27,"end":31},"obj":"Protein"},{"id":"T719","span":{"begin":64,"end":92},"obj":"Protein"},{"id":"T720","span":{"begin":119,"end":127},"obj":"Protein"},{"id":"T724","span":{"begin":74,"end":92},"obj":"Entity"},{"id":"T729","span":{"begin":101,"end":145},"obj":"Entity"},{"id":"T741","span":{"begin":105,"end":118},"obj":"Entity"}],"relations":[{"id":"R721","pred":"themeOf","subj":"T719","obj":"T760"},{"id":"R723","pred":"locationOf","subj":"T724","obj":"T760"}],"text":" the toll-like receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporte"}

{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T648","span":{"begin":119,"end":136},"obj":"Protein"}],"text":" the toll-like receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporte"}

{"project":"testone","denotations":[{"id":"T28","span":{"begin":119,"end":127},"obj":"Protein"},{"id":"T27","span":{"begin":27,"end":31},"obj":"Protein"},{"id":"T26","span":{"begin":5,"end":25},"obj":"Protein"}],"relations":[{"id":"R3","pred":"equivalentTo","subj":"T27","obj":"T26"}],"text":" the toll-like receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporte"}

{"project":"test3","denotations":[{"id":"T79","span":{"begin":119,"end":127},"obj":"Protein"},{"id":"T78","span":{"begin":27,"end":31},"obj":"Protein"},{"id":"T77","span":{"begin":5,"end":25},"obj":"Protein"},{"id":"T57","span":{"begin":119,"end":127},"obj":"Protein"},{"id":"T56","span":{"begin":27,"end":31},"obj":"Protein"},{"id":"T55","span":{"begin":5,"end":25},"obj":"Protein"}],"relations":[{"id":"R19","pred":"equivalentTo","subj":"T78","obj":"T77"}],"text":" the toll-like receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporte"}