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PMC:3589482 / 46110-46270 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T22120 159-160 . denotes .
T22119 158-159 NNP denotes ]
T22118 156-158 CD denotes 77
T22117 155-156 NNP denotes [
T22116 150-154 NN denotes type
T22115 143-149 NN denotes cancer
T22114 140-142 IN denotes on
T22113 130-139 VBG denotes depending
T22112 120-129 NN denotes indicator
T22111 109-119 JJ denotes prognostic
T22110 97-108 JJ denotes unfavorable
T22109 94-96 CC denotes or
T22108 84-93 JJ denotes favorable
T22107 82-83 DT denotes a
T22106 79-81 VBZ denotes is
T22105 75-78 CC denotes and
T22104 73-74 , denotes ,
T22103 67-73 NN denotes cancer
T22102 63-66 CC denotes and
T22101 50-62 NN denotes inflammation
T22100 45-49 DT denotes both
T22099 40-44 IN denotes with
T22098 29-39 VBN denotes associated
T22097 24-28 VBN denotes been
T22096 20-23 VBZ denotes has
T22095 9-19 NN denotes expression
T22094 0-8 CD denotes SerpinB2
R15888 T22094 T22095 nummod SerpinB2,expression
R15890 T22095 T22098 nsubjpass expression,associated
R15891 T22096 T22098 aux has,associated
R15892 T22097 T22098 auxpass been,associated
R15894 T22098 T22098 ROOT associated,associated
R15895 T22099 T22098 prep with,associated
R15896 T22100 T22101 preconj both,inflammation
R15897 T22101 T22099 pobj inflammation,with
R15900 T22102 T22101 cc and,inflammation
R15902 T22103 T22101 conj cancer,inflammation
R15903 T22104 T22098 punct ",",associated
R15905 T22105 T22098 cc and,associated
R15906 T22106 T22098 conj is,associated
R15907 T22107 T22112 det a,indicator
R15909 T22108 T22112 amod favorable,indicator
R15910 T22109 T22108 cc or,favorable
R15912 T22110 T22108 conj unfavorable,favorable
R15913 T22111 T22112 amod prognostic,indicator
R15914 T22112 T22106 attr indicator,is
R15917 T22113 T22112 acl depending,indicator
R15918 T22114 T22113 prep on,depending
R15920 T22115 T22116 compound cancer,type
R15921 T22116 T22114 pobj type,on
R15922 T22117 T22119 nmod [,]
R15924 T22118 T22119 nummod 77,]
R15925 T22119 T22112 appos ],indicator
R15927 T22120 T22106 punct .,is

2_test

Id Subject Object Predicate Lexical cue
23472114-18548086-87899196 156-158 18548086 denotes 77
T55278 156-158 18548086 denotes 77

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T19827 158-159 -RRB- denotes ]
T19826 156-158 CD denotes 77
T19825 155-156 -LRB- denotes [
T19824 150-154 NN denotes type
T19823 143-149 NN denotes cancer
T19822 140-142 IN denotes on
T19821 130-139 VB denotes depending
T19820 120-129 NN denotes indicator
T19819 109-119 JJ denotes prognostic
T19818 97-108 JJ denotes unfavorable
T19817 94-96 CC denotes or
T19816 84-93 JJ denotes favorable
T19815 82-83 DT denotes a
T19814 79-81 VB denotes is
T19813 75-78 CC denotes and
T19812 73-74 -COMMA- denotes ,
T19811 67-73 NN denotes cancer
T19810 63-66 CC denotes and
T19809 50-62 NN denotes inflammation
T19808 45-49 CC denotes both
T19807 40-44 IN denotes with
T19806 29-39 VB denotes associated
T19805 24-28 VB denotes been
T19804 20-23 VB denotes has
T19803 9-19 NN denotes expression
T19802 0-8 NN denotes SerpinB2
R14301 T19803 T19802 arg1Of expression,SerpinB2
R14302 T19803 T19804 arg1Of expression,has
R14303 T19803 T19805 arg1Of expression,been
R14304 T19803 T19806 arg2Of expression,associated
R14305 T19803 T19814 arg1Of expression,is
R14306 T19806 T19804 arg2Of associated,has
R14307 T19806 T19805 arg2Of associated,been
R14308 T19806 T19807 arg1Of associated,with
R14309 T19806 T19813 arg1Of associated,and
R14310 T19809 T19810 arg1Of inflammation,and
R14311 T19810 T19807 arg2Of and,with
R14312 T19810 T19808 arg1Of and,both
R14313 T19811 T19810 arg2Of cancer,and
R14314 T19813 T19812 arg1Of and,","
R14315 T19813 T19825 arg1Of and,[
R14316 T19814 T19813 arg2Of is,and
R14317 T19814 T19821 arg1Of is,depending
R14318 T19816 T19817 arg1Of favorable,or
R14319 T19818 T19817 arg2Of unfavorable,or
R14320 T19820 T19814 arg2Of indicator,is
R14321 T19820 T19815 arg1Of indicator,a
R14322 T19820 T19816 arg1Of indicator,favorable
R14323 T19820 T19818 arg1Of indicator,unfavorable
R14324 T19820 T19819 arg1Of indicator,prognostic
R14325 T19822 T19821 arg2Of on,depending
R14326 T19824 T19822 arg2Of type,on
R14327 T19824 T19823 arg1Of type,cancer
R14328 T19826 T19825 arg2Of 77,[
R14329 T19827 T19825 arg3Of ],[

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T18779 0-8 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T20236 0-8 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

GO-BP

Id Subject Object Predicate Lexical cue
T18823 50-62 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation

sentences

Id Subject Object Predicate Lexical cue
T18509 0-160 Sentence denotes SerpinB2 expression has been associated with both inflammation and cancer, and is a favorable or unfavorable prognostic indicator depending on cancer type [77].
T274 0-160 Sentence denotes SerpinB2 expression has been associated with both inflammation and cancer, and is a favorable or unfavorable prognostic indicator depending on cancer type [77].

simple1

Id Subject Object Predicate Lexical cue
T18916 0-8 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T20197 9-19 Gene_expression denotes expression
T20124 0-8 Protein denotes SerpinB2
R14567 T20124 T20197 themeOf SerpinB2,expression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T20636 9-19 Gene_expression denotes expression
T20574 0-8 Protein denotes SerpinB2
R14776 T20574 T20636 themeOf SerpinB2,expression

DLUT931

Id Subject Object Predicate Lexical cue
T20416 29-39 Binding denotes associated
T20415 9-19 Gene_expression denotes expression
T20348 0-8 Protein denotes SerpinB2
R14661 T20348 T20415 themeOf SerpinB2,expression
R14662 T20348 T20416 themeOf SerpinB2,associated

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T20913 0-8 Protein denotes SerpinB2

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T20759 9-19 Gene_expression denotes expression
T20758 0-8 Protein denotes SerpinB2
R14862 T20758 T20759 themeOf SerpinB2,expression

testone

Id Subject Object Predicate Lexical cue
T18227 0-8 Protein denotes SerpinB2

test3

Id Subject Object Predicate Lexical cue
T18466 9-19 Gene_expression denotes expression
T18465 0-8 Protein denotes SerpinB2
T18344 0-8 Protein denotes SerpinB2
R13218 T18465 T18466 themeOf SerpinB2,expression