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PMC:3589482 / 41444-42896 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T21515 1451-1452 . denotes .
T21440 1100-1102 IN denotes Of
T21439 1098-1099 . denotes .
T21438 1090-1098 JJ denotes critical
T21437 1084-1089 VBG denotes being
T21436 1079-1083 RB denotes also
T21435 1070-1078 NNS denotes elements
T21434 1060-1069 JJ denotes AP-1-like
T21433 1056-1059 CC denotes and
T21432 1052-1055 NNP denotes CRE
T21431 1041-1051 JJ denotes downstream
T21430 1037-1040 DT denotes the
T21429 1032-1036 IN denotes with
T21428 1030-1031 , denotes ,
T21427 1027-1030 CD denotes 539
T21426 1026-1027 CD denotes −
T21425 1022-1025 CC denotes and
T21424 1018-1021 CD denotes 189
T21423 1017-1018 VBP denotes −
T21422 1005-1016 NNS denotes nucleotides
T21421 997-1004 IN denotes between
T21420 990-996 NN denotes region
T21419 986-989 DT denotes the
T21418 983-985 IN denotes in
T21417 975-982 VBN denotes located
T21416 970-974 NN denotes site
T21415 962-969 JJ denotes binding
T21414 956-961 NNP denotes C/EBP
T21413 952-955 DT denotes the
T21412 943-951 VBN denotes required
T21411 932-942 RB denotes absolutely
T21410 917-931 VBZ denotes responsiveness
T21409 913-916 NNP denotes LPS
T21408 911-912 . denotes .
T21407 908-911 CD denotes 539
T21406 907-908 CD denotes −
T21405 903-906 CC denotes and
T21404 899-902 CD denotes 189
T21403 898-899 VBP denotes −
T21402 886-897 NNS denotes nucleotides
T21401 878-885 IN denotes between
T21400 871-877 NN denotes region
T21399 867-870 DT denotes the
T21398 864-866 IN denotes in
T21397 854-863 NNS denotes sequences
T21396 843-853 JJ denotes regulatory
T21395 832-842 JJ denotes cis-acting
T21394 827-831 IN denotes upon
T21393 817-826 JJ denotes dependent
T21392 814-816 VBZ denotes is
T21391 805-813 NN denotes response
T21390 791-804 JJ denotes LPS-inducible
T21389 787-790 DT denotes the
T21388 784-786 IN denotes of
T21387 779-783 JJS denotes most
T21386 777-778 , denotes ,
T21385 772-777 NNS denotes sites
T21384 766-771 DT denotes these
T21383 755-765 VBG denotes containing
T21382 746-754 NN denotes promoter
T21381 737-745 NNP denotes SerpinB2
T21380 730-736 NN denotes murine
T21379 726-729 DT denotes the
T21378 723-725 IN denotes of
T21377 715-722 NNS denotes regions
T21376 712-714 IN denotes by
T21375 702-711 VBN denotes conferred
T21374 693-701 NN denotes activity
T21373 677-692 JJ denotes transcriptional
T21372 665-676 JJ denotes PMA-induced
T21371 662-664 IN denotes in
T21370 652-661 NNS denotes increases
T21369 640-651 JJ denotes incremental
T21368 637-639 IN denotes of
T21367 629-636 NN denotes pattern
T21366 625-628 DT denotes the
T21365 622-624 TO denotes to
T21364 613-621 NN denotes contrast
T21363 610-612 IN denotes In
T21362 608-609 . denotes .
T21361 604-608 NN denotes gene
T21360 595-603 NNP denotes SerpinB2
T21359 588-594 NN denotes murine
T21358 584-587 DT denotes the
T21357 581-583 IN denotes of
T21356 567-580 NN denotes transcription
T21355 553-566 JJ denotes PMA-inducible
T21354 543-552 VBG denotes mediating
T21353 540-542 IN denotes in
T21352 535-539 NN denotes role
T21351 533-534 DT denotes a
T21350 528-532 VB denotes play
T21349 523-527 RB denotes also
T21348 513-522 RB denotes therefore
T21347 509-512 MD denotes may
T21346 503-508 NNS denotes sites
T21345 497-502 DT denotes These
T21344 495-496 . denotes .
T21343 493-495 CD denotes 87
T21342 492-493 CD denotes −
T21341 488-491 CC denotes and
T21340 484-487 CD denotes 189
T21339 483-484 VBP denotes −
T21338 471-482 NNS denotes nucleotides
T21337 463-470 IN denotes between
T21336 454-462 NN denotes promoter
T21335 445-453 JJ denotes proximal
T21334 436-444 NNP denotes SerpinB2
T21333 429-435 NN denotes murine
T21332 425-428 DT denotes the
T21331 422-424 IN denotes in
T21330 414-421 JJ denotes present
T21329 410-413 VBP denotes are
T21328 405-409 RB denotes also
T21327 403-404 , denotes ,
T21326 402-403 NNP denotes ]
T21325 400-402 CD denotes 37
T21324 399-400 NNP denotes [
T21323 394-398 NN denotes gene
T21322 385-393 NNP denotes SERPINB2
T21321 379-384 JJ denotes human
T21320 375-378 DT denotes the
T21319 372-374 IN denotes of
T21318 358-371 NN denotes transcription
T21317 343-357 JJ denotes PMA-stimulated
T21316 335-342 VB denotes mediate
T21315 332-334 TO denotes to
T21314 319-331 VBD denotes demonstrated
T21313 317-318 , denotes ,
T21312 309-317 NNS denotes elements
T21311 299-308 JJ denotes AP-1-like
T21310 295-298 CD denotes two
T21309 291-294 CC denotes and
T21308 287-290 NNP denotes CRE
T21307 285-286 DT denotes a
T21306 280-284 IN denotes that
T21305 274-279 VBZ denotes shows
T21304 265-273 NN denotes sequence
T21303 256-264 NN denotes promoter
T21302 247-255 JJ denotes proximal
T21301 238-246 NNP denotes SerpinB2
T21300 231-237 NN denotes murine
T21299 227-230 DT denotes the
T21298 224-226 IN denotes of
T21297 213-223 NNP denotes Inspection
T21296 211-212 . denotes .
T21295 208-211 NNP denotes LPS
T21294 205-207 IN denotes by
T21293 200-204 DT denotes that
T21292 195-199 IN denotes than
T21291 185-194 JJ denotes transient
T21290 180-184 RBR denotes more
T21289 176-179 CC denotes and
T21288 168-175 JJ denotes intense
T21287 163-167 JJR denotes less
T21286 157-162 VBG denotes being
T21285 153-156 NNP denotes PMA
T21284 150-152 IN denotes by
T21283 140-149 NN denotes induction
T21282 135-139 IN denotes with
T21281 133-134 , denotes ,
T21280 120-133 NN denotes transcription
T21279 115-119 NN denotes gene
T21278 101-114 JJ denotes LPS-inducible
T21277 97-100 CC denotes and
T21276 95-96 : denotes -
T21275 92-95 NNP denotes PMA
T21274 87-91 DT denotes both
T21273 78-86 VBN denotes mediated
T21272 74-77 CD denotes +92
T21271 70-73 CC denotes and
T21270 65-69 CD denotes -539
T21269 53-64 NNS denotes nucleotides
T21268 45-52 IN denotes between
T21267 38-44 NN denotes region
T21266 29-37 NN denotes promoter
T21265 20-28 JJ denotes proximal
T21264 11-19 NNP denotes SerpinB2
T21263 4-10 NN denotes murine
T21262 0-3 DT denotes The
T21514 1450-1451 NNP denotes ]
T21513 1448-1450 CD denotes 67
T21512 1447-1448 NNP denotes [
T21511 1442-1446 NN denotes gene
T21510 1440-1441 NN denotes β
T21509 1439-1440 : denotes -
T21508 1434-1439 NNP denotes C/EBP
T21507 1430-1433 DT denotes the
T21506 1427-1429 IN denotes of
T21505 1413-1426 NN denotes transcription
T21504 1405-1412 VB denotes control
T21503 1402-1404 TO denotes to
T21502 1396-1401 VBN denotes shown
T21501 1391-1395 VBN denotes been
T21500 1387-1390 VBZ denotes has
T21499 1382-1386 NNP denotes CREB
T21498 1380-1381 , denotes ,
T21497 1368-1380 RB denotes Additionally
T21496 1366-1367 . denotes .
T21495 1365-1366 NNP denotes ]
T21494 1363-1365 CD denotes 66
T21493 1362-1363 NNP denotes [
T21492 1360-1361 : denotes ;
T21491 1359-1360 NNP denotes ]
T21490 1357-1359 CD denotes 63
T21489 1356-1357 NNP denotes [
T21488 1346-1355 NNS denotes mediators
T21487 1333-1345 JJ denotes inflammatory
T21486 1330-1332 IN denotes of
T21485 1319-1329 NN denotes expression
T21484 1314-1318 NN denotes gene
T21483 1306-1313 VB denotes promote
T21482 1303-1305 TO denotes to
T21481 1297-1302 NNP denotes NF-κB
T21480 1293-1296 CC denotes and
T21479 1291-1292 , denotes ,
T21478 1287-1291 NNP denotes AP-1
T21477 1282-1286 IN denotes with
T21476 1273-1281 VB denotes interact
T21475 1262-1272 RB denotes physically
T21474 1259-1261 TO denotes to
T21473 1250-1258 VBN denotes reported
T21472 1245-1249 VBN denotes been
T21471 1241-1244 VBZ denotes has
T21470 1239-1240 NN denotes β
T21469 1238-1239 : denotes -
T21468 1233-1238 NNP denotes C/EBP
T21467 1229-1232 CC denotes and
T21466 1227-1228 , denotes ,
T21465 1226-1227 NNP denotes ]
T21464 1224-1226 CD denotes 63
T21463 1223-1224 NNP denotes [
T21462 1218-1222 NNP denotes AP-1
T21461 1214-1217 CC denotes and
T21460 1212-1213 -RRB- denotes )
T21459 1208-1212 NNP denotes CREB
T21458 1207-1208 -LRB- denotes (
T21457 1198-1206 NNS denotes proteins
T21456 1190-1197 JJ denotes binding
T21455 1186-1189 NNP denotes CRE
T21454 1182-1185 CC denotes and
T21453 1180-1181 NN denotes β
T21452 1179-1180 : denotes -
T21451 1174-1179 NNP denotes C/EBP
T21450 1166-1173 IN denotes between
T21449 1153-1165 NNS denotes interactions
T21448 1139-1152 JJ denotes combinatorial
T21447 1136-1138 IN denotes of
T21446 1128-1135 NNS denotes reports
T21445 1119-1127 JJ denotes previous
T21444 1115-1118 VBP denotes are
T21443 1109-1114 EX denotes there
T21442 1107-1108 , denotes ,
T21441 1103-1107 NN denotes note
R15123 T21262 T21267 det The,region
R15124 T21263 T21267 amod murine,region
R15125 T21264 T21267 nmod SerpinB2,region
R15126 T21265 T21267 amod proximal,region
R15127 T21266 T21267 compound promoter,region
R15128 T21267 T21273 nsubj region,mediated
R15129 T21268 T21267 prep between,region
R15130 T21269 T21268 pobj nucleotides,between
R15131 T21270 T21269 conj -539,nucleotides
R15132 T21271 T21270 cc and,-539
R15133 T21272 T21270 conj +92,-539
R15134 T21273 T21273 ROOT mediated,mediated
R15135 T21274 T21280 det both,transcription
R15136 T21275 T21280 nmod PMA,transcription
R15137 T21276 T21275 punct -,PMA
R15138 T21277 T21275 cc and,PMA
R15139 T21278 T21280 compound LPS-inducible,transcription
R15140 T21279 T21280 compound gene,transcription
R15141 T21280 T21273 dobj transcription,mediated
R15142 T21281 T21273 punct ",",mediated
R15143 T21282 T21273 prep with,mediated
R15144 T21283 T21286 nsubj induction,being
R15145 T21284 T21283 prep by,induction
R15146 T21285 T21286 nsubj PMA,being
R15147 T21286 T21282 pcomp being,with
R15148 T21287 T21288 advmod less,intense
R15149 T21288 T21286 acomp intense,being
R15150 T21289 T21288 cc and,intense
R15151 T21290 T21291 advmod more,transient
R15152 T21291 T21288 conj transient,intense
R15153 T21292 T21291 prep than,transient
R15154 T21293 T21292 pobj that,than
R15155 T21294 T21286 prep by,being
R15156 T21295 T21294 pobj LPS,by
R15157 T21296 T21273 punct .,mediated
R15158 T21297 T21305 nsubj Inspection,shows
R15159 T21298 T21297 prep of,Inspection
R15160 T21299 T21304 det the,sequence
R15161 T21300 T21304 nmod murine,sequence
R15162 T21301 T21304 nmod SerpinB2,sequence
R15163 T21302 T21304 amod proximal,sequence
R15164 T21303 T21304 compound promoter,sequence
R15165 T21304 T21298 pobj sequence,of
R15166 T21305 T21305 ROOT shows,shows
R15167 T21306 T21314 mark that,demonstrated
R15168 T21307 T21308 det a,CRE
R15169 T21308 T21314 nsubj CRE,demonstrated
R15170 T21309 T21308 cc and,CRE
R15171 T21310 T21312 nummod two,elements
R15172 T21311 T21312 amod AP-1-like,elements
R15173 T21312 T21308 conj elements,CRE
R15174 T21313 T21314 punct ",",demonstrated
R15175 T21314 T21305 ccomp demonstrated,shows
R15176 T21315 T21316 aux to,mediate
R15177 T21316 T21314 xcomp mediate,demonstrated
R15178 T21317 T21318 amod PMA-stimulated,transcription
R15179 T21318 T21316 dobj transcription,mediate
R15180 T21319 T21318 prep of,transcription
R15181 T21320 T21323 det the,gene
R15182 T21321 T21323 amod human,gene
R15183 T21322 T21323 compound SERPINB2,gene
R15184 T21323 T21319 pobj gene,of
R15185 T21324 T21326 nmod [,]
R15186 T21325 T21326 nummod 37,]
R15187 T21326 T21318 appos ],transcription
R15188 T21327 T21329 punct ",",are
R15189 T21328 T21329 advmod also,are
R15190 T21329 T21305 conj are,shows
R15191 T21330 T21329 acomp present,are
R15192 T21331 T21330 prep in,present
R15193 T21332 T21336 det the,promoter
R15194 T21333 T21336 nmod murine,promoter
R15195 T21334 T21336 nmod SerpinB2,promoter
R15196 T21335 T21336 amod proximal,promoter
R15197 T21336 T21331 pobj promoter,in
R15198 T21337 T21336 prep between,promoter
R15199 T21338 T21337 pobj nucleotides,between
R15200 T21339 T21329 conj −,are
R15201 T21340 T21339 dobj 189,−
R15202 T21341 T21340 cc and,189
R15203 T21342 T21340 conj −,189
R15204 T21343 T21340 conj 87,189
R15205 T21344 T21329 punct .,are
R15206 T21345 T21346 det These,sites
R15207 T21346 T21350 nsubj sites,play
R15208 T21347 T21350 aux may,play
R15209 T21348 T21350 advmod therefore,play
R15210 T21349 T21350 advmod also,play
R15211 T21350 T21350 ROOT play,play
R15212 T21351 T21352 det a,role
R15213 T21352 T21350 dobj role,play
R15214 T21353 T21352 prep in,role
R15215 T21354 T21353 pcomp mediating,in
R15216 T21355 T21356 amod PMA-inducible,transcription
R15217 T21356 T21354 dobj transcription,mediating
R15218 T21357 T21356 prep of,transcription
R15219 T21358 T21361 det the,gene
R15220 T21359 T21361 compound murine,gene
R15221 T21360 T21361 compound SerpinB2,gene
R15222 T21361 T21357 pobj gene,of
R15223 T21362 T21350 punct .,play
R15224 T21363 T21403 prep In,−
R15225 T21364 T21363 pobj contrast,In
R15226 T21365 T21364 prep to,contrast
R15227 T21366 T21367 det the,pattern
R15228 T21367 T21365 pobj pattern,to
R15229 T21368 T21367 prep of,pattern
R15230 T21369 T21370 amod incremental,increases
R15231 T21370 T21368 pobj increases,of
R15232 T21371 T21370 prep in,increases
R15233 T21372 T21374 amod PMA-induced,activity
R15234 T21373 T21374 amod transcriptional,activity
R15235 T21374 T21371 pobj activity,in
R15236 T21375 T21370 acl conferred,increases
R15237 T21376 T21375 agent by,conferred
R15238 T21377 T21376 pobj regions,by
R15239 T21378 T21377 prep of,regions
R15240 T21379 T21382 det the,promoter
R15241 T21380 T21382 compound murine,promoter
R15242 T21381 T21382 compound SerpinB2,promoter
R15243 T21382 T21378 pobj promoter,of
R15244 T21383 T21382 acl containing,promoter
R15245 T21384 T21385 det these,sites
R15246 T21385 T21383 dobj sites,containing
R15247 T21386 T21385 punct ",",sites
R15248 T21387 T21393 nsubjpass most,dependent
R15249 T21388 T21387 prep of,most
R15250 T21389 T21391 det the,response
R15251 T21390 T21391 amod LPS-inducible,response
R15252 T21391 T21388 pobj response,of
R15253 T21392 T21393 auxpass is,dependent
R15254 T21393 T21367 amod dependent,pattern
R15255 T21394 T21393 prep upon,dependent
R15256 T21395 T21397 amod cis-acting,sequences
R15257 T21396 T21397 amod regulatory,sequences
R15258 T21397 T21394 pobj sequences,upon
R15259 T21398 T21397 prep in,sequences
R15260 T21399 T21400 det the,region
R15261 T21400 T21398 pobj region,in
R15262 T21401 T21403 mark between,−
R15263 T21402 T21403 nsubj nucleotides,−
R15264 T21403 T21403 ROOT −,−
R15265 T21404 T21403 dobj 189,−
R15266 T21405 T21404 cc and,189
R15267 T21406 T21404 conj −,189
R15268 T21407 T21404 conj 539,189
R15269 T21408 T21403 punct .,−
R15270 T21409 T21412 nsubj LPS,required
R15271 T21410 T21412 nsubj responsiveness,required
R15272 T21411 T21412 advmod absolutely,required
R15273 T21412 T21412 ROOT required,required
R15274 T21413 T21416 det the,site
R15275 T21414 T21416 nmod C/EBP,site
R15276 T21415 T21416 amod binding,site
R15277 T21416 T21412 dobj site,required
R15278 T21417 T21416 acl located,site
R15279 T21418 T21417 prep in,located
R15280 T21419 T21420 det the,region
R15281 T21420 T21418 pobj region,in
R15282 T21421 T21416 prep between,site
R15283 T21422 T21421 pobj nucleotides,between
R15284 T21423 T21412 dobj −,required
R15285 T21424 T21423 nummod 189,−
R15286 T21425 T21424 cc and,189
R15287 T21426 T21424 conj −,189
R15288 T21427 T21424 conj 539,189
R15289 T21428 T21423 punct ",",−
R15290 T21429 T21423 prep with,−
R15291 T21430 T21432 det the,CRE
R15292 T21431 T21432 amod downstream,CRE
R15293 T21432 T21437 nsubj CRE,being
R15294 T21433 T21432 cc and,CRE
R15295 T21434 T21435 amod AP-1-like,elements
R15296 T21435 T21432 conj elements,CRE
R15297 T21436 T21437 advmod also,being
R15298 T21437 T21429 pcomp being,with
R15299 T21438 T21437 acomp critical,being
R15300 T21439 T21412 punct .,required
R15301 T21440 T21444 prep Of,are
R15302 T21441 T21440 pobj note,Of
R15303 T21442 T21444 punct ",",are
R15304 T21443 T21444 expl there,are
R15305 T21444 T21444 ROOT are,are
R15306 T21445 T21446 amod previous,reports
R15307 T21446 T21444 attr reports,are
R15308 T21447 T21446 prep of,reports
R15309 T21448 T21449 amod combinatorial,interactions
R15310 T21449 T21447 pobj interactions,of
R15311 T21450 T21449 prep between,interactions
R15312 T21451 T21450 pobj C/EBP,between
R15313 T21452 T21451 punct -,C/EBP
R15314 T21453 T21451 conj β,C/EBP
R15315 T21454 T21453 cc and,β
R15316 T21455 T21457 nmod CRE,proteins
R15317 T21456 T21457 amod binding,proteins
R15318 T21457 T21453 conj proteins,β
R15319 T21458 T21459 punct (,CREB
R15320 T21459 T21457 appos CREB,proteins
R15321 T21460 T21459 punct ),CREB
R15322 T21461 T21459 cc and,CREB
R15323 T21462 T21463 compound AP-1,[
R15324 T21463 T21459 conj [,CREB
R15325 T21464 T21465 nummod 63,]
R15326 T21465 T21459 conj ],CREB
R15327 T21466 T21465 punct ",",]
R15328 T21467 T21465 cc and,]
R15329 T21468 T21470 compound C/EBP,β
R15330 T21469 T21470 punct -,β
R15331 T21470 T21473 nsubjpass β,reported
R15332 T21471 T21473 aux has,reported
R15333 T21472 T21473 auxpass been,reported
R15334 T21473 T21444 conj reported,are
R15335 T21474 T21476 aux to,interact
R15336 T21475 T21476 advmod physically,interact
R15337 T21476 T21473 xcomp interact,reported
R15338 T21477 T21476 prep with,interact
R15339 T21478 T21477 pobj AP-1,with
R15340 T21479 T21473 punct ",",reported
R15341 T21480 T21473 cc and,reported
R15342 T21481 T21473 conj NF-κB,reported
R15343 T21482 T21483 aux to,promote
R15344 T21483 T21473 advcl promote,reported
R15345 T21484 T21485 compound gene,expression
R15346 T21485 T21483 dobj expression,promote
R15347 T21486 T21485 prep of,expression
R15348 T21487 T21488 amod inflammatory,mediators
R15349 T21488 T21486 pobj mediators,of
R15350 T21489 T21491 nmod [,]
R15351 T21490 T21491 nummod 63,]
R15352 T21491 T21495 nmod ],]
R15353 T21492 T21491 punct ;,]
R15354 T21493 T21491 conj [,]
R15355 T21494 T21495 nummod 66,]
R15356 T21495 T21485 appos ],expression
R15357 T21496 T21473 punct .,reported
R15358 T21497 T21502 advmod Additionally,shown
R15359 T21498 T21502 punct ",",shown
R15360 T21499 T21502 nsubjpass CREB,shown
R15361 T21500 T21502 aux has,shown
R15362 T21501 T21502 auxpass been,shown
R15363 T21502 T21502 ROOT shown,shown
R15364 T21503 T21504 aux to,control
R15365 T21504 T21502 xcomp control,shown
R15366 T21505 T21504 dobj transcription,control
R15367 T21506 T21505 prep of,transcription
R15368 T21507 T21511 det the,gene
R15369 T21508 T21511 compound C/EBP,gene
R15370 T21509 T21510 punct -,β
R15371 T21510 T21511 compound β,gene
R15372 T21511 T21506 pobj gene,of
R15373 T21512 T21514 nmod [,]
R15374 T21513 T21514 nummod 67,]
R15375 T21514 T21511 appos ],gene
R15376 T21515 T21502 punct .,shown

2_test

Id Subject Object Predicate Lexical cue
23472114-21257317-87899187 1224-1226 21257317 denotes 63
23472114-21257317-87899188 1357-1359 21257317 denotes 63
23472114-8234276-87899189 1363-1365 8234276 denotes 66
T48334 1224-1226 21257317 denotes 63
T11049 1357-1359 21257317 denotes 63
T41507 1363-1365 8234276 denotes 66

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T19285 1450-1451 -RRB- denotes ]
T19284 1448-1450 CD denotes 67
T19283 1447-1448 -LRB- denotes [
T19282 1442-1446 NN denotes gene
T19281 1434-1441 NN denotes C/EBP-β
T19280 1430-1433 DT denotes the
T19279 1427-1429 IN denotes of
T19278 1413-1426 NN denotes transcription
T19277 1405-1412 VB denotes control
T19276 1402-1404 TO denotes to
T19275 1396-1401 VB denotes shown
T19274 1391-1395 VB denotes been
T19273 1387-1390 VB denotes has
T19272 1382-1386 NN denotes CREB
T19271 1380-1381 -COMMA- denotes ,
T19270 1368-1380 RB denotes Additionally
T19269 1365-1366 -RRB- denotes ]
T19268 1363-1365 CD denotes 66
T19267 1362-1363 -LRB- denotes [
T19266 1360-1361 -COLON- denotes ;
T19265 1359-1360 -RRB- denotes ]
T19264 1357-1359 CD denotes 63
T19263 1356-1357 -LRB- denotes [
T19262 1346-1355 NN denotes mediators
T19261 1333-1345 JJ denotes inflammatory
T19260 1330-1332 IN denotes of
T19259 1319-1329 NN denotes expression
T19258 1314-1318 NN denotes gene
T19257 1306-1313 VB denotes promote
T19256 1303-1305 TO denotes to
T19255 1297-1302 NN denotes NF-κB
T19254 1293-1296 CC denotes and
T19253 1291-1292 -COMMA- denotes ,
T19252 1287-1291 NN denotes AP-1
T19251 1282-1286 IN denotes with
T19250 1273-1281 VB denotes interact
T19249 1262-1272 RB denotes physically
T19248 1259-1261 TO denotes to
T19247 1250-1258 VB denotes reported
T19246 1245-1249 VB denotes been
T19245 1241-1244 VB denotes has
T19244 1233-1240 NN denotes C/EBP-β
T19243 1229-1232 CC denotes and
T19242 1227-1228 -COMMA- denotes ,
T19241 1226-1227 -RRB- denotes ]
T19240 1224-1226 CD denotes 63
T19239 1223-1224 -LRB- denotes [
T19238 1218-1222 NN denotes AP-1
T19237 1214-1217 CC denotes and
T19236 1212-1213 -RRB- denotes )
T19235 1208-1212 NN denotes CREB
T19234 1207-1208 -LRB- denotes (
T19233 1198-1206 NN denotes proteins
T19232 1190-1197 NN denotes binding
T19231 1186-1189 NN denotes CRE
T19230 1182-1185 CC denotes and
T19229 1174-1181 NN denotes C/EBP-β
T19228 1166-1173 IN denotes between
T19227 1153-1165 NN denotes interactions
T19226 1139-1152 JJ denotes combinatorial
T19225 1136-1138 IN denotes of
T19224 1128-1135 NN denotes reports
T19223 1119-1127 JJ denotes previous
T19222 1115-1118 VB denotes are
T19221 1109-1114 EX denotes there
T19220 1107-1108 -COMMA- denotes ,
T19219 1103-1107 NN denotes note
T19218 1100-1102 IN denotes Of
T19217 1090-1098 JJ denotes critical
T19216 1084-1089 VB denotes being
T19215 1079-1083 RB denotes also
T19214 1070-1078 NN denotes elements
T19213 1060-1069 JJ denotes AP-1-like
T19212 1056-1059 CC denotes and
T19211 1052-1055 NN denotes CRE
T19210 1041-1051 JJ denotes downstream
T19209 1037-1040 DT denotes the
T19208 1032-1036 IN denotes with
T19207 1030-1031 -COMMA- denotes ,
T19206 1026-1030 CD denotes −539
T19205 1022-1025 CC denotes and
T19204 1017-1021 CD denotes −189
T19203 1005-1016 NN denotes nucleotides
T19202 997-1004 IN denotes between
T19201 990-996 NN denotes region
T19200 986-989 DT denotes the
T19199 983-985 IN denotes in
T19198 975-982 JJ denotes located
T19197 970-974 NN denotes site
T19196 962-969 NN denotes binding
T19195 956-961 NN denotes C/EBP
T19194 952-955 DT denotes the
T19193 943-951 VB denotes required
T19192 932-942 RB denotes absolutely
T19191 917-931 NN denotes responsiveness
T19190 913-916 NN denotes LPS
T19189 907-911 CD denotes −539
T19188 903-906 CC denotes and
T19187 898-902 CD denotes −189
T19186 886-897 NN denotes nucleotides
T19185 878-885 IN denotes between
T19184 871-877 NN denotes region
T19183 867-870 DT denotes the
T19182 864-866 IN denotes in
T19181 854-863 NN denotes sequences
T19180 843-853 JJ denotes regulatory
T19179 832-842 JJ denotes cis-acting
T19178 827-831 IN denotes upon
T19177 817-826 JJ denotes dependent
T19176 814-816 VB denotes is
T19175 805-813 NN denotes response
T19174 791-804 JJ denotes LPS-inducible
T19173 787-790 DT denotes the
T19172 784-786 IN denotes of
T19171 779-783 JJ denotes most
T19170 777-778 -COMMA- denotes ,
T19169 772-777 NN denotes sites
T19168 766-771 DT denotes these
T19167 755-765 VB denotes containing
T19166 746-754 NN denotes promoter
T19165 737-745 NN denotes SerpinB2
T19164 730-736 JJ denotes murine
T19163 726-729 DT denotes the
T19162 723-725 IN denotes of
T19161 715-722 NN denotes regions
T19160 712-714 IN denotes by
T19159 702-711 VB denotes conferred
T19158 693-701 NN denotes activity
T19157 677-692 JJ denotes transcriptional
T19156 665-676 JJ denotes PMA-induced
T19155 662-664 IN denotes in
T19154 652-661 NN denotes increases
T19153 640-651 JJ denotes incremental
T19152 637-639 IN denotes of
T19151 629-636 NN denotes pattern
T19150 625-628 DT denotes the
T19149 622-624 TO denotes to
T19148 613-621 NN denotes contrast
T19147 610-612 IN denotes In
T19146 604-608 NN denotes gene
T19145 595-603 NN denotes SerpinB2
T19144 588-594 JJ denotes murine
T19143 584-587 DT denotes the
T19142 581-583 IN denotes of
T19141 567-580 NN denotes transcription
T19140 553-566 JJ denotes PMA-inducible
T19139 543-552 VB denotes mediating
T19138 540-542 IN denotes in
T19137 535-539 NN denotes role
T19136 533-534 DT denotes a
T19135 528-532 VB denotes play
T19134 523-527 RB denotes also
T19133 513-522 RB denotes therefore
T19132 509-512 MD denotes may
T19131 503-508 NN denotes sites
T19130 497-502 DT denotes These
T19129 492-495 CD denotes −87
T19128 488-491 CC denotes and
T19127 483-487 CD denotes −189
T19126 471-482 NN denotes nucleotides
T19125 463-470 IN denotes between
T19124 454-462 NN denotes promoter
T19123 445-453 JJ denotes proximal
T19122 436-444 NN denotes SerpinB2
T19121 429-435 JJ denotes murine
T19120 425-428 DT denotes the
T19119 422-424 IN denotes in
T19118 414-421 JJ denotes present
T19117 410-413 VB denotes are
T19116 405-409 RB denotes also
T19115 403-404 -COMMA- denotes ,
T19114 402-403 -RRB- denotes ]
T19113 400-402 CD denotes 37
T19112 399-400 -LRB- denotes [
T19111 394-398 NN denotes gene
T19110 385-393 NN denotes SERPINB2
T19109 379-384 JJ denotes human
T19108 375-378 DT denotes the
T19107 372-374 IN denotes of
T19106 358-371 NN denotes transcription
T19105 343-357 JJ denotes PMA-stimulated
T19104 335-342 VB denotes mediate
T19103 332-334 TO denotes to
T19102 319-331 VB denotes demonstrated
T19101 317-318 -COMMA- denotes ,
T19100 309-317 NN denotes elements
T19099 299-308 JJ denotes AP-1-like
T19098 295-298 CD denotes two
T19097 291-294 CC denotes and
T19096 287-290 NN denotes CRE
T19095 285-286 DT denotes a
T19094 280-284 IN denotes that
T19093 274-279 VB denotes shows
T19092 265-273 NN denotes sequence
T19091 256-264 NN denotes promoter
T19090 247-255 JJ denotes proximal
T19089 238-246 NN denotes SerpinB2
T19088 231-237 JJ denotes murine
T19087 227-230 DT denotes the
T19086 224-226 IN denotes of
T19085 213-223 NN denotes Inspection
T19084 208-211 NN denotes LPS
T19083 205-207 IN denotes by
T19082 200-204 DT denotes that
T19081 195-199 IN denotes than
T19080 185-194 JJ denotes transient
T19079 180-184 RB denotes more
T19078 176-179 CC denotes and
T19077 168-175 JJ denotes intense
T19076 163-167 RB denotes less
T19075 157-162 VB denotes being
T19074 153-156 NN denotes PMA
T19073 150-152 IN denotes by
T19072 140-149 NN denotes induction
T19071 135-139 IN denotes with
T19070 133-134 -COMMA- denotes ,
T19069 120-133 NN denotes transcription
T19068 115-119 NN denotes gene
T19067 101-114 JJ denotes LPS-inducible
T19066 97-100 CC denotes and
T19065 92-96 NN denotes PMA-
T19064 87-91 CC denotes both
T19063 78-86 VB denotes mediated
T19062 74-77 CD denotes +92
T19061 70-73 CC denotes and
T19060 65-69 CD denotes -539
T19059 53-64 NN denotes nucleotides
T19058 45-52 IN denotes between
T19057 38-44 NN denotes region
T19056 29-37 NN denotes promoter
T19055 20-28 JJ denotes proximal
T19054 11-19 NN denotes SerpinB2
T19053 4-10 JJ denotes murine
T19052 0-3 DT denotes The
R13517 T19057 T19052 arg1Of region,The
R13518 T19057 T19053 arg1Of region,murine
R13519 T19057 T19054 arg1Of region,SerpinB2
R13520 T19057 T19055 arg1Of region,proximal
R13521 T19057 T19056 arg1Of region,promoter
R13522 T19057 T19058 arg1Of region,between
R13523 T19057 T19063 arg1Of region,mediated
R13524 T19060 T19061 arg1Of -539,and
R13525 T19061 T19058 arg2Of and,between
R13526 T19061 T19059 arg1Of and,nucleotides
R13527 T19062 T19061 arg2Of +92,and
R13528 T19063 T19070 arg1Of mediated,","
R13529 T19063 T19071 arg1Of mediated,with
R13530 T19065 T19066 arg1Of PMA-,and
R13531 T19066 T19064 arg1Of and,both
R13532 T19067 T19066 arg2Of LPS-inducible,and
R13533 T19069 T19063 arg2Of transcription,mediated
R13534 T19069 T19065 arg1Of transcription,PMA-
R13535 T19069 T19067 arg1Of transcription,LPS-inducible
R13536 T19069 T19068 arg1Of transcription,gene
R13537 T19072 T19071 arg2Of induction,with
R13538 T19072 T19073 arg1Of induction,by
R13539 T19072 T19075 arg1Of induction,being
R13540 T19072 T19077 arg1Of induction,intense
R13541 T19072 T19080 arg1Of induction,transient
R13542 T19074 T19073 arg2Of PMA,by
R13543 T19075 T19071 arg3Of being,with
R13544 T19077 T19076 arg1Of intense,less
R13545 T19077 T19078 arg1Of intense,and
R13546 T19078 T19075 arg2Of and,being
R13547 T19078 T19081 arg1Of and,than
R13548 T19080 T19078 arg2Of transient,and
R13549 T19080 T19079 arg1Of transient,more
R13550 T19082 T19081 arg2Of that,than
R13551 T19082 T19083 arg1Of that,by
R13552 T19084 T19083 arg2Of LPS,by
R13553 T19085 T19086 arg1Of Inspection,of
R13554 T19085 T19093 arg1Of Inspection,shows
R13555 T19092 T19086 arg2Of sequence,of
R13556 T19092 T19087 arg1Of sequence,the
R13557 T19092 T19088 arg1Of sequence,murine
R13558 T19092 T19089 arg1Of sequence,SerpinB2
R13559 T19092 T19090 arg1Of sequence,proximal
R13560 T19092 T19091 arg1Of sequence,promoter
R13561 T19096 T19097 arg1Of CRE,and
R13562 T19097 T19095 arg1Of and,a
R13563 T19097 T19102 arg1Of and,demonstrated
R13564 T19100 T19097 arg2Of elements,and
R13565 T19100 T19098 arg1Of elements,two
R13566 T19100 T19099 arg1Of elements,AP-1-like
R13567 T19102 T19093 arg2Of demonstrated,shows
R13568 T19102 T19094 arg1Of demonstrated,that
R13569 T19102 T19101 arg1Of demonstrated,","
R13570 T19104 T19103 arg1Of mediate,to
R13571 T19104 T19117 arg1Of mediate,are
R13572 T19104 T19118 arg1Of mediate,present
R13573 T19106 T19104 arg2Of transcription,mediate
R13574 T19106 T19105 arg1Of transcription,PMA-stimulated
R13575 T19106 T19107 arg1Of transcription,of
R13576 T19111 T19107 arg2Of gene,of
R13577 T19111 T19108 arg1Of gene,the
R13578 T19111 T19109 arg1Of gene,human
R13579 T19111 T19110 arg1Of gene,SERPINB2
R13580 T19111 T19112 arg1Of gene,[
R13581 T19113 T19112 arg2Of 37,[
R13582 T19114 T19112 arg3Of ],[
R13583 T19117 T19102 arg2Of are,demonstrated
R13584 T19117 T19115 arg1Of are,","
R13585 T19117 T19116 arg1Of are,also
R13586 T19118 T19117 arg2Of present,are
R13587 T19118 T19119 arg1Of present,in
R13588 T19124 T19119 arg2Of promoter,in
R13589 T19124 T19120 arg1Of promoter,the
R13590 T19124 T19121 arg1Of promoter,murine
R13591 T19124 T19122 arg1Of promoter,SerpinB2
R13592 T19124 T19123 arg1Of promoter,proximal
R13593 T19124 T19125 arg1Of promoter,between
R13594 T19127 T19128 arg1Of −189,and
R13595 T19128 T19125 arg2Of and,between
R13596 T19128 T19126 arg1Of and,nucleotides
R13597 T19129 T19128 arg2Of −87,and
R13598 T19131 T19130 arg1Of sites,These
R13599 T19131 T19132 arg1Of sites,may
R13600 T19131 T19135 arg1Of sites,play
R13601 T19135 T19132 arg2Of play,may
R13602 T19135 T19133 arg1Of play,therefore
R13603 T19135 T19134 arg1Of play,also
R13604 T19135 T19138 arg1Of play,in
R13605 T19137 T19135 arg2Of role,play
R13606 T19137 T19136 arg1Of role,a
R13607 T19139 T19138 arg2Of mediating,in
R13608 T19141 T19139 arg2Of transcription,mediating
R13609 T19141 T19140 arg1Of transcription,PMA-inducible
R13610 T19141 T19142 arg1Of transcription,of
R13611 T19146 T19142 arg2Of gene,of
R13612 T19146 T19143 arg1Of gene,the
R13613 T19146 T19144 arg1Of gene,murine
R13614 T19146 T19145 arg1Of gene,SerpinB2
R13615 T19147 T19149 arg1Of In,to
R13616 T19148 T19147 arg2Of contrast,In
R13617 T19151 T19147 arg3Of pattern,In
R13618 T19151 T19150 arg1Of pattern,the
R13619 T19151 T19152 arg1Of pattern,of
R13620 T19154 T19152 arg2Of increases,of
R13621 T19154 T19153 arg1Of increases,incremental
R13622 T19154 T19155 arg1Of increases,in
R13623 T19158 T19155 arg2Of activity,in
R13624 T19158 T19156 arg1Of activity,PMA-induced
R13625 T19158 T19157 arg1Of activity,transcriptional
R13626 T19158 T19159 arg2Of activity,conferred
R13627 T19161 T19159 arg1Of regions,conferred
R13628 T19161 T19160 arg2Of regions,by
R13629 T19161 T19162 arg1Of regions,of
R13630 T19166 T19162 arg2Of promoter,of
R13631 T19166 T19163 arg1Of promoter,the
R13632 T19166 T19164 arg1Of promoter,murine
R13633 T19166 T19165 arg1Of promoter,SerpinB2
R13634 T19166 T19167 arg1Of promoter,containing
R13635 T19169 T19167 arg2Of sites,containing
R13636 T19169 T19168 arg1Of sites,these
R13637 T19171 T19172 arg1Of most,of
R13638 T19171 T19176 arg1Of most,is
R13639 T19171 T19177 arg1Of most,dependent
R13640 T19175 T19172 arg2Of response,of
R13641 T19175 T19173 arg1Of response,the
R13642 T19175 T19174 arg1Of response,LPS-inducible
R13643 T19176 T19147 arg1Of is,In
R13644 T19176 T19170 arg1Of is,","
R13645 T19177 T19176 arg2Of dependent,is
R13646 T19177 T19178 arg1Of dependent,upon
R13647 T19181 T19178 arg2Of sequences,upon
R13648 T19181 T19179 arg1Of sequences,cis-acting
R13649 T19181 T19180 arg1Of sequences,regulatory
R13650 T19181 T19182 arg1Of sequences,in
R13651 T19184 T19182 arg2Of region,in
R13652 T19184 T19183 arg1Of region,the
R13653 T19184 T19185 arg1Of region,between
R13654 T19187 T19188 arg1Of −189,and
R13655 T19188 T19185 arg2Of and,between
R13656 T19188 T19186 arg1Of and,nucleotides
R13657 T19189 T19188 arg2Of −539,and
R13658 T19191 T19190 arg1Of responsiveness,LPS
R13659 T19191 T19193 arg1Of responsiveness,required
R13660 T19193 T19192 arg1Of required,absolutely
R13661 T19193 T19207 arg1Of required,","
R13662 T19193 T19208 arg1Of required,with
R13663 T19197 T19193 arg2Of site,required
R13664 T19197 T19194 arg1Of site,the
R13665 T19197 T19195 arg1Of site,C/EBP
R13666 T19197 T19196 arg1Of site,binding
R13667 T19197 T19198 arg1Of site,located
R13668 T19198 T19199 arg1Of located,in
R13669 T19201 T19199 arg2Of region,in
R13670 T19201 T19200 arg1Of region,the
R13671 T19201 T19202 arg1Of region,between
R13672 T19204 T19205 arg1Of −189,and
R13673 T19205 T19202 arg2Of and,between
R13674 T19205 T19203 arg1Of and,nucleotides
R13675 T19206 T19205 arg2Of −539,and
R13676 T19211 T19209 arg1Of CRE,the
R13677 T19211 T19210 arg1Of CRE,downstream
R13678 T19211 T19212 arg1Of CRE,and
R13679 T19213 T19212 arg2Of AP-1-like,and
R13680 T19214 T19208 arg2Of elements,with
R13681 T19214 T19211 arg1Of elements,CRE
R13682 T19214 T19213 arg1Of elements,AP-1-like
R13683 T19214 T19216 arg1Of elements,being
R13684 T19214 T19217 arg1Of elements,critical
R13685 T19216 T19208 arg3Of being,with
R13686 T19216 T19215 arg1Of being,also
R13687 T19217 T19216 arg2Of critical,being
R13688 T19219 T19218 arg2Of note,Of
R13689 T19221 T19222 arg1Of there,are
R13690 T19222 T19243 arg1Of are,and
R13691 T19224 T19222 arg2Of reports,are
R13692 T19224 T19223 arg1Of reports,previous
R13693 T19224 T19225 arg1Of reports,of
R13694 T19227 T19225 arg2Of interactions,of
R13695 T19227 T19226 arg1Of interactions,combinatorial
R13696 T19227 T19228 arg1Of interactions,between
R13697 T19229 T19230 arg1Of C/EBP-β,and
R13698 T19230 T19234 arg1Of and,(
R13699 T19230 T19237 arg1Of and,and
R13700 T19233 T19230 arg2Of proteins,and
R13701 T19233 T19231 arg1Of proteins,CRE
R13702 T19233 T19232 arg1Of proteins,binding
R13703 T19235 T19234 arg2Of CREB,(
R13704 T19236 T19234 arg3Of ),(
R13705 T19237 T19228 arg2Of and,between
R13706 T19238 T19237 arg2Of AP-1,and
R13707 T19238 T19239 arg1Of AP-1,[
R13708 T19240 T19239 arg2Of 63,[
R13709 T19241 T19239 arg3Of ],[
R13710 T19243 T19218 arg1Of and,Of
R13711 T19243 T19220 arg1Of and,","
R13712 T19243 T19242 arg1Of and,","
R13713 T19244 T19245 arg1Of C/EBP-β,has
R13714 T19244 T19246 arg1Of C/EBP-β,been
R13715 T19244 T19247 arg2Of C/EBP-β,reported
R13716 T19244 T19250 arg1Of C/EBP-β,interact
R13717 T19247 T19243 arg2Of reported,and
R13718 T19247 T19245 arg2Of reported,has
R13719 T19247 T19246 arg2Of reported,been
R13720 T19247 T19266 arg1Of reported,;
R13721 T19247 T19267 arg1Of reported,[
R13722 T19250 T19247 arg3Of interact,reported
R13723 T19250 T19248 arg1Of interact,to
R13724 T19250 T19249 arg1Of interact,physically
R13725 T19250 T19251 arg1Of interact,with
R13726 T19252 T19254 arg1Of AP-1,and
R13727 T19254 T19251 arg2Of and,with
R13728 T19254 T19253 arg1Of and,","
R13729 T19255 T19254 arg2Of NF-κB,and
R13730 T19255 T19256 modOf NF-κB,to
R13731 T19257 T19256 arg1Of promote,to
R13732 T19257 T19263 arg1Of promote,[
R13733 T19259 T19257 arg2Of expression,promote
R13734 T19259 T19258 arg1Of expression,gene
R13735 T19259 T19260 arg1Of expression,of
R13736 T19262 T19260 arg2Of mediators,of
R13737 T19262 T19261 arg1Of mediators,inflammatory
R13738 T19264 T19263 arg2Of 63,[
R13739 T19265 T19263 arg3Of ],[
R13740 T19268 T19267 arg2Of 66,[
R13741 T19269 T19267 arg3Of ],[
R13742 T19272 T19273 arg1Of CREB,has
R13743 T19272 T19274 arg1Of CREB,been
R13744 T19272 T19275 arg2Of CREB,shown
R13745 T19272 T19277 arg1Of CREB,control
R13746 T19275 T19270 arg1Of shown,Additionally
R13747 T19275 T19271 arg1Of shown,","
R13748 T19275 T19273 arg2Of shown,has
R13749 T19275 T19274 arg2Of shown,been
R13750 T19277 T19275 arg3Of control,shown
R13751 T19277 T19276 arg1Of control,to
R13752 T19277 T19283 arg1Of control,[
R13753 T19278 T19277 arg2Of transcription,control
R13754 T19278 T19279 arg1Of transcription,of
R13755 T19282 T19279 arg2Of gene,of
R13756 T19282 T19280 arg1Of gene,the
R13757 T19282 T19281 arg1Of gene,C/EBP-β
R13758 T19284 T19283 arg2Of 67,[
R13759 T19285 T19283 arg3Of ],[

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T18710 105-114 Antecedent denotes inducible
T18709 787-813 Anaphor denotes the LPS-inducible response
R13381 T18709 T18710 boundBy the LPS-inducible response,inducible

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T18735 1434-1441 Protein denotes C/EBP-β
T18734 1233-1240 Protein denotes C/EBP-β
T18733 1174-1181 Protein denotes C/EBP-β
T18732 737-745 Protein denotes SerpinB2
T18731 595-603 Protein denotes SerpinB2
T18730 436-444 Protein denotes SerpinB2
T18729 385-393 Protein denotes SERPINB2
T18728 238-246 Protein denotes SerpinB2
T18727 11-19 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T20285 1382-1386 http://www.uniprot.org/uniprot/Q02930 denotes CREB
T20284 1208-1212 http://www.uniprot.org/uniprot/Q02930 denotes CREB
T20269 299-303 http://www.uniprot.org/uniprot/P05412 denotes AP-1
T20249 1434-1441 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T20248 1233-1240 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T20247 1174-1181 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T20242 385-393 http://www.uniprot.org/uniprot/P05120 denotes SERPINB2
T20218 737-745 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T20217 595-603 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T20216 436-444 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T20215 238-246 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T20214 11-19 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T20283 1382-1386 http://www.uniprot.org/uniprot/P15336 denotes CREB
T20282 1208-1212 http://www.uniprot.org/uniprot/P15336 denotes CREB
T20281 1382-1386 http://www.uniprot.org/uniprot/O43889 denotes CREB
T20280 1208-1212 http://www.uniprot.org/uniprot/O43889 denotes CREB
T20279 1382-1386 http://www.uniprot.org/uniprot/P16220 denotes CREB
T20278 1208-1212 http://www.uniprot.org/uniprot/P16220 denotes CREB
T20277 1382-1386 http://www.uniprot.org/uniprot/Q8TEY5 denotes CREB
T20276 1208-1212 http://www.uniprot.org/uniprot/Q8TEY5 denotes CREB
T20275 1382-1386 http://www.uniprot.org/uniprot/P18848 denotes CREB
T20274 1208-1212 http://www.uniprot.org/uniprot/P18848 denotes CREB
T20273 1190-1212 http://www.uniprot.org/uniprot/Q92793 denotes binding proteins (CREB
T20272 1287-1291 http://www.uniprot.org/uniprot/P05412 denotes AP-1
T20271 1218-1222 http://www.uniprot.org/uniprot/P05412 denotes AP-1
T20270 1060-1064 http://www.uniprot.org/uniprot/P05412 denotes AP-1

GO-BP

Id Subject Object Predicate Lexical cue
T18819 1405-1426 http://purl.obolibrary.org/obo/GO_0006355 denotes control transcription
T18813 1314-1329 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T18802 1413-1426 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T18801 567-580 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T18800 358-371 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T18799 120-133 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

GO-MF

Id Subject Object Predicate Lexical cue
T18848 1190-1206 http://purl.obolibrary.org/obo/GO_0005515 denotes binding proteins
T18847 1186-1197 http://purl.obolibrary.org/obo/GO_0035497 denotes CRE binding
T18846 1190-1197 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T18845 962-969 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T18491 1368-1452 Sentence denotes Additionally, CREB has been shown to control transcription of the C/EBP-β gene [67].
T18490 1100-1367 Sentence denotes Of note, there are previous reports of combinatorial interactions between C/EBP-β and CRE binding proteins (CREB) and AP-1 [63], and C/EBP-β has been reported to physically interact with AP-1, and NF-κB to promote gene expression of inflammatory mediators [63]; [66].
T18489 913-1099 Sentence denotes LPS responsiveness absolutely required the C/EBP binding site located in the region between nucleotides −189 and −539, with the downstream CRE and AP-1-like elements also being critical.
T18488 610-912 Sentence denotes In contrast to the pattern of incremental increases in PMA-induced transcriptional activity conferred by regions of the murine SerpinB2 promoter containing these sites, most of the LPS-inducible response is dependent upon cis-acting regulatory sequences in the region between nucleotides −189 and −539.
T18487 497-609 Sentence denotes These sites may therefore also play a role in mediating PMA-inducible transcription of the murine SerpinB2 gene.
T18486 213-496 Sentence denotes Inspection of the murine SerpinB2 proximal promoter sequence shows that a CRE and two AP-1-like elements, demonstrated to mediate PMA-stimulated transcription of the human SERPINB2 gene [37], also are present in the murine SerpinB2 proximal promoter between nucleotides −189 and −87.
T18485 0-212 Sentence denotes The murine SerpinB2 proximal promoter region between nucleotides -539 and +92 mediated both PMA- and LPS-inducible gene transcription, with induction by PMA being less intense and more transient than that by LPS.
T250 0-212 Sentence denotes The murine SerpinB2 proximal promoter region between nucleotides -539 and +92 mediated both PMA- and LPS-inducible gene transcription, with induction by PMA being less intense and more transient than that by LPS.
T251 213-496 Sentence denotes Inspection of the murine SerpinB2 proximal promoter sequence shows that a CRE and two AP-1-like elements, demonstrated to mediate PMA-stimulated transcription of the human SERPINB2 gene [37], also are present in the murine SerpinB2 proximal promoter between nucleotides −189 and −87.
T252 497-609 Sentence denotes These sites may therefore also play a role in mediating PMA-inducible transcription of the murine SerpinB2 gene.
T253 610-912 Sentence denotes In contrast to the pattern of incremental increases in PMA-induced transcriptional activity conferred by regions of the murine SerpinB2 promoter containing these sites, most of the LPS-inducible response is dependent upon cis-acting regulatory sequences in the region between nucleotides −189 and −539.
T254 913-1099 Sentence denotes LPS responsiveness absolutely required the C/EBP binding site located in the region between nucleotides −189 and −539, with the downstream CRE and AP-1-like elements also being critical.
T255 1100-1367 Sentence denotes Of note, there are previous reports of combinatorial interactions between C/EBP-β and CRE binding proteins (CREB) and AP-1 [63], and C/EBP-β has been reported to physically interact with AP-1, and NF-κB to promote gene expression of inflammatory mediators [63]; [66].
T256 1368-1452 Sentence denotes Additionally, CREB has been shown to control transcription of the C/EBP-β gene [67].

simple1

Id Subject Object Predicate Lexical cue
T18872 1434-1441 Protein denotes C/EBP-β
T18871 1233-1240 Protein denotes C/EBP-β
T18870 1174-1181 Protein denotes C/EBP-β
T18869 737-745 Protein denotes SerpinB2
T18868 595-603 Protein denotes SerpinB2
T18867 436-444 Protein denotes SerpinB2
T18866 385-393 Protein denotes SERPINB2
T18865 238-246 Protein denotes SerpinB2
T18864 11-19 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T20080 1434-1441 Protein denotes C/EBP-β
T20079 1233-1240 Protein denotes C/EBP-β
T20078 1174-1181 Protein denotes C/EBP-β
T20077 737-745 Protein denotes SerpinB2
T20076 595-603 Protein denotes SerpinB2
T20075 436-444 Protein denotes SerpinB2
T20074 385-393 Protein denotes SERPINB2
T20073 238-246 Protein denotes SerpinB2
T20072 11-19 Protein denotes SerpinB2
T20157 1405-1412 Regulation denotes control
T20156 1413-1426 Transcription denotes transcription
T20155 1273-1281 Binding denotes interact
T20154 1153-1165 Binding denotes interactions
T20153 652-661 Positive_regulation denotes increases
T20152 543-552 Positive_regulation denotes mediating
T20151 567-580 Transcription denotes transcription
T20150 535-539 Regulation denotes role
T20149 553-566 Positive_regulation denotes PMA-inducible
T20148 414-421 Positive_regulation denotes present
T20147 358-371 Transcription denotes transcription
T20146 343-357 Positive_regulation denotes PMA-stimulated
T20145 335-342 Positive_regulation denotes mediate
T20144 140-149 Positive_regulation denotes induction
R14512 T20072 T20144 themeOf SerpinB2,induction
R14513 T20074 T20147 themeOf SERPINB2,transcription
R14514 T20075 T20148 themeOf SerpinB2,present
R14515 T20076 T20151 themeOf SerpinB2,transcription
R14516 T20077 T20153 themeOf SerpinB2,increases
R14517 T20078 T20154 themeOf C/EBP-β,interactions
R14518 T20079 T20155 themeOf C/EBP-β,interact
R14519 T20080 T20156 themeOf C/EBP-β,transcription
R14578 T20147 T20145 themeOf transcription,mediate
R14579 T20147 T20146 themeOf transcription,PMA-stimulated
R14580 T20151 T20152 themeOf transcription,mediating
R14581 T20151 T20149 themeOf transcription,PMA-inducible
R14582 T20152 T20150 themeOf mediating,role
R14583 T20156 T20157 themeOf transcription,control

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T20530 1434-1441 Protein denotes C/EBP-β
T20529 1233-1240 Protein denotes C/EBP-β
T20528 1174-1181 Protein denotes C/EBP-β
T20527 737-745 Protein denotes SerpinB2
T20526 595-603 Protein denotes SerpinB2
T20525 436-444 Protein denotes SerpinB2
T20524 385-393 Protein denotes SERPINB2
T20523 238-246 Protein denotes SerpinB2
T20522 11-19 Protein denotes SerpinB2
T20593 567-580 Transcription denotes transcription
T20592 358-371 Transcription denotes transcription
T20598 1413-1426 Transcription denotes transcription
T20597 1273-1281 Binding denotes interact
T20596 1153-1165 Binding denotes interactions
T20595 543-552 Positive_regulation denotes mediating
T20594 553-566 Positive_regulation denotes PMA-inducible
R14737 T20528 T20596 themeOf C/EBP-β,interactions
R14738 T20529 T20597 themeOf C/EBP-β,interact
R14739 T20530 T20598 themeOf C/EBP-β,transcription
R14735 T20524 T20592 themeOf SERPINB2,transcription
R14736 T20526 T20593 themeOf SerpinB2,transcription
R14782 T20593 T20595 themeOf transcription,mediating
R14783 T20593 T20594 themeOf transcription,PMA-inducible

DLUT931

Id Subject Object Predicate Lexical cue
T20377 1413-1426 Transcription denotes transcription
T20376 1273-1281 Binding denotes interact
T20375 1153-1165 Binding denotes interactions
T20374 553-566 Positive_regulation denotes PMA-inducible
T20373 543-552 Positive_regulation denotes mediating
T20372 567-580 Transcription denotes transcription
T20371 358-371 Transcription denotes transcription
T20370 78-86 Positive_regulation denotes mediated
T20304 1434-1441 Protein denotes C/EBP-β
T20303 1233-1240 Protein denotes C/EBP-β
T20302 1174-1181 Protein denotes C/EBP-β
T20301 737-745 Protein denotes SerpinB2
T20300 595-603 Protein denotes SerpinB2
T20299 436-444 Protein denotes SerpinB2
T20298 385-393 Protein denotes SERPINB2
T20297 238-246 Protein denotes SerpinB2
T20296 11-19 Protein denotes SerpinB2
R14623 T20296 T20370 themeOf SerpinB2,mediated
R14624 T20298 T20371 themeOf SERPINB2,transcription
R14625 T20300 T20372 themeOf SerpinB2,transcription
R14626 T20302 T20375 themeOf C/EBP-β,interactions
R14627 T20303 T20376 themeOf C/EBP-β,interact
R14628 T20304 T20377 themeOf C/EBP-β,transcription
R14674 T20372 T20373 themeOf transcription,mediating
R14675 T20372 T20374 themeOf transcription,PMA-inducible

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T21119 343-403 Transcription denotes PMA-stimulated transcription of the human SERPINB2 gene [37]
T21117 1368-1451 Regulation denotes Additionally, CREB has been shown to control transcription of the C/EBP-β gene [67]
T21110 1306-1329 Positive_regulation denotes promote gene expression
T21109 343-403 Positive_regulation denotes PMA-stimulated transcription of the human SERPINB2 gene [37]
T21095 553-608 Transcription denotes PMA-inducible transcription of the murine SerpinB2 gene
T21094 1314-1329 Gene_expression denotes gene expression
T21092 1166-1228 Binding denotes between C/EBP-β and CRE binding proteins (CREB) and AP-1 [63],
T21085 1259-1329 Binding denotes to physically interact with AP-1, and NF-κB to promote gene expression
T21084 543-608 Regulation denotes mediating PMA-inducible transcription of the murine SerpinB2 gene
T21083 101-134 Transcription denotes LPS-inducible gene transcription,
T21081 1413-1451 Transcription denotes transcription of the C/EBP-β gene [67]
T21077 0-44 Entity denotes The murine SerpinB2 proximal promoter region
T21076 436-444 Protein denotes SerpinB2
T21067 208-211 Entity denotes LPS
T21066 1218-1228 Protein denotes AP-1 [63],
T21058 1005-1016 Entity denotes nucleotides
T21057 92-96 Entity denotes PMA-
T21054 1427-1446 Protein denotes of the C/EBP-β gene
T21045 665-668 Entity denotes PMA
T21043 1297-1302 Protein denotes NF-κB
T21036 287-290 Protein denotes CRE
T21034 224-246 Protein denotes of the murine SerpinB2
T21029 115-119 Protein denotes gene
T21026 784-804 Entity denotes of the LPS-inducible
T21025 1060-1064 Protein denotes AP-1
T21021 471-482 Entity denotes nucleotides
T21020 299-403 Protein denotes AP-1-like elements, demonstrated to mediate PMA-stimulated transcription of the human SERPINB2 gene [37]
T21017 723-778 Entity denotes of the murine SerpinB2 promoter containing these sites,
T21015 595-603 Protein denotes SerpinB2
T21008 913-916 Entity denotes LPS
T21006 1186-1189 Protein denotes CRE
T21002 581-608 Protein denotes of the murine SerpinB2 gene
T20994 766-777 Entity denotes these sites
T20993 343-357 Entity denotes PMA-stimulated
T20991 1208-1212 Protein denotes CREB
T20989 372-403 Protein denotes of the human SERPINB2 gene [37]
T20986 11-19 Protein denotes SerpinB2
T20985 1434-1441 Protein denotes C/EBP-β
T20984 256-264 Entity denotes promoter
T20978 1314-1318 Protein denotes gene
T20968 1233-1240 Protein denotes C/EBP-β
T20967 497-508 Entity denotes These sites
T20958 385-393 Protein denotes SERPINB2
T20941 1037-1055 Protein denotes the downstream CRE
T20940 53-64 Entity denotes nucleotides
T20937 779-804 Entity denotes most of the LPS-inducible
T20935 1198-1213 Protein denotes proteins (CREB)
T20932 425-495 Entity denotes the murine SerpinB2 proximal promoter between nucleotides −189 and −87
T20923 1174-1181 Protein denotes C/EBP-β
T20922 956-961 Protein denotes C/EBP
T20907 737-745 Protein denotes SerpinB2
T20906 886-902 Entity denotes nucleotides −189
T20905 153-156 Entity denotes PMA
T20903 1287-1292 Protein denotes AP-1,
T20952 1382-1386 Protein denotes CREB
R14932 T20903 T21085 themeOf "AP-1,","to physically interact with AP-1, and NF-κB to promote gene expression"
R14937 T20935 T21092 themeOf proteins (CREB),"between C/EBP-β and CRE binding proteins (CREB) and AP-1 [63],"
R14944 T20952 T21117 causeOf CREB,"Additionally, CREB has been shown to control transcription of the C/EBP-β gene [67]"
R14949 T20978 T21094 themeOf gene,gene expression
R14952 T20989 T21119 themeOf of the human SERPINB2 gene [37],PMA-stimulated transcription of the human SERPINB2 gene [37]
R14953 T20993 T21109 causeOf PMA-stimulated,PMA-stimulated transcription of the human SERPINB2 gene [37]
R14957 T21002 T21095 themeOf of the murine SerpinB2 gene,PMA-inducible transcription of the murine SerpinB2 gene
R14964 T21029 T21083 themeOf gene,"LPS-inducible gene transcription,"
R14966 T21043 T21085 themeOf NF-κB,"to physically interact with AP-1, and NF-κB to promote gene expression"
R14968 T21054 T21081 themeOf of the C/EBP-β gene,transcription of the C/EBP-β gene [67]
R14970 T21066 T21092 themeOf "AP-1 [63],","between C/EBP-β and CRE binding proteins (CREB) and AP-1 [63],"
R14972 T21081 T21117 themeOf transcription of the C/EBP-β gene [67],"Additionally, CREB has been shown to control transcription of the C/EBP-β gene [67]"
R14974 T21094 T21110 themeOf gene expression,promote gene expression
R14975 T21095 T21084 themeOf PMA-inducible transcription of the murine SerpinB2 gene,mediating PMA-inducible transcription of the murine SerpinB2 gene
R14982 T21119 T21109 themeOf PMA-stimulated transcription of the human SERPINB2 gene [37],PMA-stimulated transcription of the human SERPINB2 gene [37]

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T20684 1405-1412 Regulation denotes control
T20683 1413-1426 Transcription denotes transcription
T20682 1434-1446 Protein denotes C/EBP-β gene
T20681 1382-1386 Protein denotes CREB
T20680 1153-1165 Binding denotes interactions
T20679 1297-1302 Protein denotes NF-κB
T20678 1287-1291 Protein denotes AP-1
T20677 1233-1240 Protein denotes C/EBP-β
T20676 1208-1212 Protein denotes CREB
T20675 1186-1206 Protein denotes CRE binding proteins
T20674 1174-1181 Protein denotes C/EBP-β
T20673 1060-1064 Protein denotes AP-1
T20672 956-961 Protein denotes C/EBP
T20671 730-754 Protein denotes murine SerpinB2 promoter
T20670 543-552 Positive_regulation denotes mediating
T20669 567-580 Transcription denotes transcription
T20668 588-608 Protein denotes murine SerpinB2 gene
T20667 429-462 Protein denotes murine SerpinB2 proximal promoter
T20666 299-303 Protein denotes AP-1
T20665 231-273 Protein denotes murine SerpinB2 proximal promoter sequence
T20664 4-37 Protein denotes murine SerpinB2 proximal promoter
R14817 T20668 T20669 themeOf murine SerpinB2 gene,transcription
R14818 T20669 T20670 themeOf transcription,mediating
R14819 T20674 T20680 themeOf C/EBP-β,interactions
R14820 T20675 T20680 themeOf CRE binding proteins,interactions
R14821 T20681 T20684 causeOf CREB,control
R14822 T20682 T20683 themeOf C/EBP-β gene,transcription
R14823 T20683 T20684 themeOf transcription,control

testone

Id Subject Object Predicate Lexical cue
T18248 1273-1281 Binding denotes interact
T18247 1190-1197 Binding denotes binding
T18246 1153-1165 Binding denotes interactions
T18245 567-580 Transcription denotes transcription
T18244 557-566 Positive_regulation denotes inducible
T18243 358-371 Transcription denotes transcription
T18242 347-357 Positive_regulation denotes stimulated
T18241 335-342 Positive_regulation denotes mediate
T18183 1434-1441 Protein denotes C/EBP-β
T18182 1233-1240 Protein denotes C/EBP-β
T18181 1174-1181 Protein denotes C/EBP-β
T18180 737-745 Protein denotes SerpinB2
T18179 595-603 Protein denotes SerpinB2
T18178 436-444 Protein denotes SerpinB2
T18177 385-393 Protein denotes SERPINB2
T18176 238-246 Protein denotes SerpinB2
T18175 11-19 Protein denotes SerpinB2
R13112 T18177 T18243 themeOf SERPINB2,transcription
R13113 T18179 T18245 themeOf SerpinB2,transcription
R13114 T18181 T18247 themeOf C/EBP-β,binding
R13115 T18181 T18248 themeOf C/EBP-β,interact
R13116 T18181 T18246 themeOf C/EBP-β,interactions
R13117 T18182 T18248 themeOf C/EBP-β,interact
R13118 T18182 T18246 themeOf C/EBP-β,interactions
R13144 T18242 T18241 themeOf stimulated,mediate
R13145 T18243 T18242 themeOf transcription,stimulated
R13146 T18243 T18241 themeOf transcription,mediate
R13147 T18245 T18244 themeOf transcription,inducible

test3

Id Subject Object Predicate Lexical cue
T18384 1434-1441 Protein denotes C/EBP-β
T18383 1413-1426 Transcription denotes transcription
T18382 1273-1281 Binding denotes interact
T18381 1233-1240 Protein denotes C/EBP-β
T18380 1190-1197 Binding denotes binding
T18379 1174-1181 Protein denotes C/EBP-β
T18378 737-745 Protein denotes SerpinB2
T18377 595-603 Protein denotes SerpinB2
T18376 436-444 Protein denotes SerpinB2
T18375 385-393 Protein denotes SERPINB2
T18374 358-371 Transcription denotes transcription
T18373 347-357 Positive_regulation denotes stimulated
T18372 238-246 Protein denotes SerpinB2
T18371 11-19 Protein denotes SerpinB2
T18300 1434-1441 Protein denotes C/EBP-β
T18299 1233-1240 Protein denotes C/EBP-β
T18298 1174-1181 Protein denotes C/EBP-β
T18297 737-745 Protein denotes SerpinB2
T18296 595-603 Protein denotes SerpinB2
T18295 436-444 Protein denotes SerpinB2
T18294 385-393 Protein denotes SERPINB2
T18293 238-246 Protein denotes SerpinB2
T18292 11-19 Protein denotes SerpinB2
R13168 T18374 T18373 themeOf transcription,stimulated
R13169 T18375 T18374 themeOf SERPINB2,transcription
R13170 T18376 T18374 themeOf SerpinB2,transcription
R13171 T18379 T18380 themeOf C/EBP-β,binding
R13172 T18379 T18382 themeOf C/EBP-β,interact
R13173 T18381 T18382 themeOf C/EBP-β,interact
R13174 T18384 T18383 themeOf C/EBP-β,transcription