PMC:3589482 / 414-784
Annnotations
bionlp-st-ge-2016-spacy-parsed
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pmc-enju-pas
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bionlp-st-ge-2016-test-proteins
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bionlp-st-ge-2016-uniprot
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simple1
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BioNLP16_DUT
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BioNLP16_Messiy
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DLUT931
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bionlp-st-ge-2016-test-ihmc
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bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T649","span":{"begin":302,"end":322},"obj":"Protein"},{"id":"T648","span":{"begin":194,"end":211},"obj":"Protein"},{"id":"T647","span":{"begin":45,"end":51},"obj":"Positive_regulation"},{"id":"T646","span":{"begin":61,"end":71},"obj":"Gene_expression"},{"id":"T645","span":{"begin":52,"end":60},"obj":"Protein"}],"relations":[{"id":"R324","pred":"themeOf","subj":"T645","obj":"T646"},{"id":"R325","pred":"themeOf","subj":"T646","obj":"T647"}],"text":"ide (LPS), a potent bacterial endotoxin, can induce SerpinB2 expression via the toll-like receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine SerpinB2 gene and several deletion mutants into murine macrop"}
testone
{"project":"testone","denotations":[{"id":"T40","span":{"begin":61,"end":71},"obj":"Gene_expression"},{"id":"T39","span":{"begin":45,"end":51},"obj":"Positive_regulation"},{"id":"T29","span":{"begin":309,"end":317},"obj":"Protein"},{"id":"T28","span":{"begin":194,"end":202},"obj":"Protein"},{"id":"T27","span":{"begin":102,"end":106},"obj":"Protein"},{"id":"T26","span":{"begin":80,"end":100},"obj":"Protein"},{"id":"T25","span":{"begin":52,"end":60},"obj":"Protein"}],"relations":[{"id":"R3","pred":"equivalentTo","subj":"T27","obj":"T26"},{"id":"R8","pred":"themeOf","subj":"T40","obj":"T39"},{"id":"R2","pred":"themeOf","subj":"T25","obj":"T40"}],"text":"ide (LPS), a potent bacterial endotoxin, can induce SerpinB2 expression via the toll-like receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine SerpinB2 gene and several deletion mutants into murine macrop"}
test3
{"project":"test3","denotations":[{"id":"T80","span":{"begin":309,"end":317},"obj":"Protein"},{"id":"T79","span":{"begin":194,"end":202},"obj":"Protein"},{"id":"T78","span":{"begin":102,"end":106},"obj":"Protein"},{"id":"T77","span":{"begin":80,"end":100},"obj":"Protein"},{"id":"T76","span":{"begin":61,"end":71},"obj":"Gene_expression"},{"id":"T75","span":{"begin":52,"end":60},"obj":"Protein"},{"id":"T74","span":{"begin":45,"end":51},"obj":"Positive_regulation"},{"id":"T58","span":{"begin":309,"end":317},"obj":"Protein"},{"id":"T57","span":{"begin":194,"end":202},"obj":"Protein"},{"id":"T56","span":{"begin":102,"end":106},"obj":"Protein"},{"id":"T55","span":{"begin":80,"end":100},"obj":"Protein"},{"id":"T54","span":{"begin":52,"end":60},"obj":"Protein"}],"relations":[{"id":"R17","pred":"themeOf","subj":"T75","obj":"T76"},{"id":"R18","pred":"themeOf","subj":"T76","obj":"T74"},{"id":"R19","pred":"equivalentTo","subj":"T78","obj":"T77"}],"text":"ide (LPS), a potent bacterial endotoxin, can induce SerpinB2 expression via the toll-like receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. To map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine SerpinB2 gene and several deletion mutants into murine macrop"}